RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
RFC5-201ENST00000392542 MAP3K4Q9Y6R4 1608 aa16.43■□□□□ 0.22
RFC5-201ENST00000392542 EIF3AQ14152 1382 aaKnown RBP16.43■□□□□ 0.22
RFC5-201ENST00000392542 MYOM2P54296 1465 aa16.43■□□□□ 0.22
RFC5-201ENST00000392542 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
RFC5-201ENST00000392542 MYOM1P52179 1685 aa16.42■□□□□ 0.22
RFC5-201ENST00000392542 RCAN3Q9UKA8 241 aa16.42■□□□□ 0.22
RFC5-201ENST00000392542 IFT172Q9UG01 1749 aa16.42■□□□□ 0.22
RFC5-201ENST00000392542 ABCA6Q8N139 1617 aa16.41■□□□□ 0.22
RFC5-201ENST00000392542 LMTK2Q8IWU2 1503 aa16.41■□□□□ 0.22
RFC5-201ENST00000392542 KNSTRNQ9Y448 316 aa16.41■□□□□ 0.22
RFC5-201ENST00000392542 UGGT1Q9NYU2 1555 aa16.41■□□□□ 0.22
RFC5-201ENST00000392542 KDM5AP29375 1690 aaKnown RBP16.4■□□□□ 0.22
RFC5-201ENST00000392542 PPRC1Q5VV67 1664 aaKnown RBP16.4■□□□□ 0.22
RFC5-201ENST00000392542 ZNF518AQ6AHZ1 1483 aa16.4■□□□□ 0.22
RFC5-201ENST00000392542 ASXL1Q8IXJ9 1541 aa16.4■□□□□ 0.22
RFC5-201ENST00000392542 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
RFC5-201ENST00000392542 MROH2AA6NES4 1674 aa16.38■□□□□ 0.21
RFC5-201ENST00000392542 CFAP74Q9C0B2 1584 aa16.38■□□□□ 0.21
RFC5-201ENST00000392542 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
RFC5-201ENST00000392542 CDCA7LQ96GN5 454 aa16.37■□□□□ 0.21
RFC5-201ENST00000392542 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
RFC5-201ENST00000392542 NRXN1Q9ULB1 1477 aa16.35■□□□□ 0.21
RFC5-201ENST00000392542 SLC24A1O60721 1099 aa16.35■□□□□ 0.21
RFC5-201ENST00000392542 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
RFC5-201ENST00000392542 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
RFC5-201ENST00000392542 CFAP70Q5T0N1 1121 aa16.35■□□□□ 0.21
RFC5-201ENST00000392542 EXOC6Q8TAG9 804 aa16.34■□□□□ 0.21
RFC5-201ENST00000392542 ADAMTS8Q9UP79 889 aa16.34■□□□□ 0.21
RFC5-201ENST00000392542 MYO3AQ8NEV4 1616 aa16.34■□□□□ 0.21
RFC5-201ENST00000392542 ADGRB3O60242 1522 aa16.34■□□□□ 0.21
RFC5-201ENST00000392542 ERVK-7P63135 1459 aa16.34■□□□□ 0.21
RFC5-201ENST00000392542 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
RFC5-201ENST00000392542 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.2
RFC5-201ENST00000392542 MLH3Q9UHC1 1453 aa16.32■□□□□ 0.2
RFC5-201ENST00000392542 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
RFC5-201ENST00000392542 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
RFC5-201ENST00000392542 CD109Q6YHK3 1445 aa16.31■□□□□ 0.2
RFC5-201ENST00000392542 HECW2Q9P2P5 1572 aa16.31■□□□□ 0.2
RFC5-201ENST00000392542 SETBP1Q9Y6X0 1596 aa16.31■□□□□ 0.2
RFC5-201ENST00000392542 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
RFC5-201ENST00000392542 SBNO2Q9Y2G9 1366 aa16.29■□□□□ 0.2
RFC5-201ENST00000392542 NOS1P29475 1434 aa16.29■□□□□ 0.2
RFC5-201ENST00000392542 PPLO60437 1756 aa16.29■□□□□ 0.2
RFC5-201ENST00000392542 NPATQ14207 1427 aa16.28■□□□□ 0.2
RFC5-201ENST00000392542 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
RFC5-201ENST00000392542 OSCARQ8IYS5 282 aa16.27■□□□□ 0.19
RFC5-201ENST00000392542 CFAP65Q6ZU64 1925 aaKnown RBP16.26■□□□□ 0.19
RFC5-201ENST00000392542 ZNF521Q96K83 1311 aa16.26■□□□□ 0.19
RFC5-201ENST00000392542 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
RFC5-201ENST00000392542 ABCC3O15438 1527 aa16.25■□□□□ 0.19
RFC5-201ENST00000392542 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
RFC5-201ENST00000392542 PLIN1O60240 522 aa16.24■□□□□ 0.19
RFC5-201ENST00000392542 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
RFC5-201ENST00000392542 GGT6Q6P531 493 aa16.23■□□□□ 0.19
RFC5-201ENST00000392542 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
RFC5-201ENST00000392542 DUSP27Q5VZP5 1158 aa16.23■□□□□ 0.19
RFC5-201ENST00000392542 CARD14Q9BXL6 1004 aa16.23■□□□□ 0.19
RFC5-201ENST00000392542 QRICH2Q9H0J4 1663 aa16.22■□□□□ 0.19
RFC5-201ENST00000392542 ADGRB1O14514 1584 aa16.22■□□□□ 0.19
RFC5-201ENST00000392542 NEO1Q92859 1461 aa16.22■□□□□ 0.19
RFC5-201ENST00000392542 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
RFC5-201ENST00000392542 RPGRIP1LQ68CZ1 1315 aa16.22■□□□□ 0.19
RFC5-201ENST00000392542 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
RFC5-201ENST00000392542 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
RFC5-201ENST00000392542 C14orf93Q9H972 538 aaKnown RBP16.21■□□□□ 0.19
RFC5-201ENST00000392542 SIGLEC1Q9BZZ2 1709 aa16.2■□□□□ 0.18
RFC5-201ENST00000392542 PIK3C2BO00750 1634 aa16.19■□□□□ 0.18
RFC5-201ENST00000392542 ANP32AP39687 249 aaKnown RBP16.18■□□□□ 0.18
RFC5-201ENST00000392542 DIP2CQ9Y2E4 1556 aa16.18■□□□□ 0.18
RFC5-201ENST00000392542 SLFN5Q08AF3 891 aa16.18■□□□□ 0.18
RFC5-201ENST00000392542 TRAK1Q9UPV9 953 aa16.18■□□□□ 0.18
RFC5-201ENST00000392542 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
RFC5-201ENST00000392542 CCDC146Q8IYE0 955 aa16.17■□□□□ 0.18
RFC5-201ENST00000392542 MS4A1P11836 297 aa16.16■□□□□ 0.18
RFC5-201ENST00000392542 TRMT2AQ8IZ69 625 aaKnown RBP16.16■□□□□ 0.18
RFC5-201ENST00000392542 POLR3AO14802 1390 aaPredicted RBP16.16■□□□□ 0.18
RFC5-201ENST00000392542 NSD3Q9BZ95 1437 aa16.16■□□□□ 0.18
RFC5-201ENST00000392542 GLI2P10070 1586 aa16.15■□□□□ 0.18
RFC5-201ENST00000392542 C20orf194Q5TEA3 1177 aa16.15■□□□□ 0.18
RFC5-201ENST00000392542 USP32Q8NFA0 1604 aa16.15■□□□□ 0.18
RFC5-201ENST00000392542 APAF1O14727 1248 aa16.15■□□□□ 0.18
RFC5-201ENST00000392542 NEXMIFQ5QGS0 1516 aa16.15■□□□□ 0.18
RFC5-201ENST00000392542 RICTORQ6R327 1708 aa16.14■□□□□ 0.17
RFC5-201ENST00000392542 RAPGEF3O95398 923 aa16.14■□□□□ 0.17
RFC5-201ENST00000392542 NGEFQ8N5V2 710 aa16.14■□□□□ 0.17
RFC5-201ENST00000392542 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
RFC5-201ENST00000392542 IPO9Q96P70 1041 aaKnown RBP16.14■□□□□ 0.17
RFC5-201ENST00000392542 ARHGAP31Q2M1Z3 1444 aa16.14■□□□□ 0.17
RFC5-201ENST00000392542 ARHGEF28Q8N1W1 1705 aaKnown RBP16.13■□□□□ 0.17
RFC5-201ENST00000392542 TMEM132EQ6IEE7 984 aa16.13■□□□□ 0.17
RFC5-201ENST00000392542 NKTRP30414 1462 aaKnown RBP16.13■□□□□ 0.17
RFC5-201ENST00000392542 SHPRHQ149N8 1683 aa16.12■□□□□ 0.17
RFC5-201ENST00000392542 PDE4AP27815 886 aa16.12■□□□□ 0.17
RFC5-201ENST00000392542 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
RFC5-201ENST00000392542 E9PSI1 815 aa16.1■□□□□ 0.17
RFC5-201ENST00000392542 VGFO15240 615 aaPredicted RBP16.1■□□□□ 0.17
RFC5-201ENST00000392542 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
RFC5-201ENST00000392542 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
RFC5-201ENST00000392542 BACH2Q9BYV9 841 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms