RNA–Protein interactions for RNA: ENST00000392025.5

SPTBN4-204, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-204ENST00000392025 C1orf141Q5JVX7 400 aa21.67■■□□□ 1.06
SPTBN4-204ENST00000392025 EVA1CP58658 441 aa21.67■■□□□ 1.06
SPTBN4-204ENST00000392025 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.66■■□□□ 1.06
SPTBN4-204ENST00000392025 CARMIL1Q5VZK9 1371 aa21.66■■□□□ 1.06
SPTBN4-204ENST00000392025 CCDC43Q96MW1 224 aaKnown RBP21.66■■□□□ 1.06
SPTBN4-204ENST00000392025 NAT10Q9H0A0 1025 aaKnown RBP21.66■■□□□ 1.06
SPTBN4-204ENST00000392025 TRIM29Q14134 588 aa21.66■■□□□ 1.06
SPTBN4-204ENST00000392025 EFCAB2Q5VUJ9 269 aa21.66■■□□□ 1.06
SPTBN4-204ENST00000392025 CAVIN1Q6NZI2 390 aaKnown RBP21.65■■□□□ 1.06
SPTBN4-204ENST00000392025 KIAA0754O94854 1291 aa21.65■■□□□ 1.06
SPTBN4-204ENST00000392025 WWC1Q8IX03 1113 aa21.65■■□□□ 1.06
SPTBN4-204ENST00000392025 CWC22Q9HCG8 908 aaKnown RBP21.65■■□□□ 1.06
SPTBN4-204ENST00000392025 ROCK1Q13464 1354 aa21.64■■□□□ 1.06
SPTBN4-204ENST00000392025 MRE11P49959 708 aa21.64■■□□□ 1.05
SPTBN4-204ENST00000392025 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
SPTBN4-204ENST00000392025 VPS37DQ86XT2 251 aa21.63■■□□□ 1.05
SPTBN4-204ENST00000392025 SLC4A10Q6U841 1118 aa21.63■■□□□ 1.05
SPTBN4-204ENST00000392025 RUFY2Q8WXA3 655 aa21.62■■□□□ 1.05
SPTBN4-204ENST00000392025 IFT57Q9NWB7 429 aa21.61■■□□□ 1.05
SPTBN4-204ENST00000392025 LETM1O95202 739 aaPredicted RBP21.6■■□□□ 1.05
SPTBN4-204ENST00000392025 NUCB2P80303 420 aa21.59■■□□□ 1.05
SPTBN4-204ENST00000392025 ODF2Q5BJF6 829 aa21.59■■□□□ 1.05
SPTBN4-204ENST00000392025 HSP90AB3PQ58FF7 597 aa21.59■■□□□ 1.05
SPTBN4-204ENST00000392025 REC8O95072 547 aa21.59■■□□□ 1.05
SPTBN4-204ENST00000392025 NUP155O75694 1391 aa21.59■■□□□ 1.05
SPTBN4-204ENST00000392025 CENPJQ9HC77 1338 aaPredicted RBP21.58■■□□□ 1.05
SPTBN4-204ENST00000392025 NASPP49321 788 aaPredicted RBP21.58■■□□□ 1.04
SPTBN4-204ENST00000392025 R3HCC1Q9Y3T6 440 aaKnown RBP21.57■■□□□ 1.04
SPTBN4-204ENST00000392025 CHMP5Q9NZZ3 219 aa21.57■■□□□ 1.04
SPTBN4-204ENST00000392025 PKD2Q13563 968 aa21.57■■□□□ 1.04
SPTBN4-204ENST00000392025 TRDNQ13061 729 aa21.56■■□□□ 1.04
SPTBN4-204ENST00000392025 WASHC2CQ9Y4E1 1318 aa21.55■■□□□ 1.04
SPTBN4-204ENST00000392025 ERICH2A1L162 156 aa21.55■■□□□ 1.04
SPTBN4-204ENST00000392025 TTC5Q8N0Z6 440 aa21.55■■□□□ 1.04
SPTBN4-204ENST00000392025 GOLGA6L10A6NI86 522 aa21.55■■□□□ 1.04
SPTBN4-204ENST00000392025 EIF3JO75822 258 aaKnown RBP21.55■■□□□ 1.04
SPTBN4-204ENST00000392025 SASS6Q6UVJ0 657 aa21.55■■□□□ 1.04
SPTBN4-204ENST00000392025 MEX3CQ5U5Q3 659 aaKnown RBP21.53■■□□□ 1.04
SPTBN4-204ENST00000392025 RNF20Q5VTR2 975 aa21.52■■□□□ 1.04
SPTBN4-204ENST00000392025 PCMTD1Q96MG8 357 aaPredicted RBP21.52■■□□□ 1.04
SPTBN4-204ENST00000392025 WWC2Q6AWC2 1192 aa21.52■■□□□ 1.04
SPTBN4-204ENST00000392025 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
SPTBN4-204ENST00000392025 DDX58O95786 925 aaKnown RBP21.52■■□□□ 1.03
SPTBN4-204ENST00000392025 CGNL1Q0VF96 1302 aa21.52■■□□□ 1.03
SPTBN4-204ENST00000392025 ZKSCAN1P17029 563 aaPredicted RBP21.51■■□□□ 1.03
SPTBN4-204ENST00000392025 PDCL2Q8N4E4 241 aa21.51■■□□□ 1.03
SPTBN4-204ENST00000392025 SIN3AQ96ST3 1273 aa21.51■■□□□ 1.03
SPTBN4-204ENST00000392025 CT47A1Q5JQC4 288 aaPredicted RBP21.51■■□□□ 1.03
SPTBN4-204ENST00000392025 PDE4AP27815 886 aa21.51■■□□□ 1.03
SPTBN4-204ENST00000392025 KIF15Q9NS87 1388 aa21.5■■□□□ 1.03
SPTBN4-204ENST00000392025 EPS15P42566 896 aa21.5■■□□□ 1.03
SPTBN4-204ENST00000392025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.5■■□□□ 1.032e-9■■■■■ 316.7
SPTBN4-204ENST00000392025 C9orf78Q9NZ63 289 aaPredicted RBP21.5■■□□□ 1.03
SPTBN4-204ENST00000392025 ERLIN2O94905 339 aa21.49■■□□□ 1.03
SPTBN4-204ENST00000392025 TEFQ10587 303 aa21.49■■□□□ 1.03
SPTBN4-204ENST00000392025 MSH5O43196 834 aa21.48■■□□□ 1.03
SPTBN4-204ENST00000392025 KIF7Q2M1P5 1343 aa21.48■■□□□ 1.03
SPTBN4-204ENST00000392025 ANKRD18AQ8IVF6 992 aa21.48■■□□□ 1.03
SPTBN4-204ENST00000392025 RABEP1Q15276 862 aa21.47■■□□□ 1.03
SPTBN4-204ENST00000392025 NLRP13Q86W25 1043 aa21.47■■□□□ 1.03
SPTBN4-204ENST00000392025 CPLX1O14810 134 aa21.46■■□□□ 1.03
SPTBN4-204ENST00000392025 FAM107BQ9H098 131 aa21.46■■□□□ 1.03
SPTBN4-204ENST00000392025 TXLNBQ8N3L3 684 aa21.46■■□□□ 1.03
SPTBN4-204ENST00000392025 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
SPTBN4-204ENST00000392025 CT47B1P0C2W7 299 aaPredicted RBP21.46■■□□□ 1.03
SPTBN4-204ENST00000392025 MCTP1Q6DN14 999 aa21.46■■□□□ 1.03
SPTBN4-204ENST00000392025 BRMS1Q9HCU9 246 aa21.46■■□□□ 1.03
SPTBN4-204ENST00000392025 COG3Q96JB2 828 aa21.46■■□□□ 1.03
SPTBN4-204ENST00000392025 EVC2Q86UK5 1308 aa21.45■■□□□ 1.03
SPTBN4-204ENST00000392025 AAMPQ13685 434 aa21.45■■□□□ 1.02
SPTBN4-204ENST00000392025 GIMAP7Q8NHV1 300 aa21.45■■□□□ 1.02
SPTBN4-204ENST00000392025 SAFBQ15424 915 aaKnown RBP eCLIP21.45■■□□□ 1.02
SPTBN4-204ENST00000392025 PRKCSHP14314 528 aaPredicted RBP21.45■■□□□ 1.02
SPTBN4-204ENST00000392025 CCDC144AA2RUR9 1427 aa21.44■■□□□ 1.02
SPTBN4-204ENST00000392025 RILPL2Q969X0 211 aa21.44■■□□□ 1.02
SPTBN4-204ENST00000392025 ERLIN1O75477 346 aa21.44■■□□□ 1.02
SPTBN4-204ENST00000392025 RAD21O60216 631 aa21.44■■□□□ 1.02
SPTBN4-204ENST00000392025 DDX11Q96FC9 970 aa21.44■■□□□ 1.02
SPTBN4-204ENST00000392025 IQCEQ6IPM2 695 aa21.43■■□□□ 1.02
SPTBN4-204ENST00000392025 MBD3O95983 291 aa21.43■■□□□ 1.02
SPTBN4-204ENST00000392025 PLCD4Q9BRC7 762 aa21.43■■□□□ 1.02
SPTBN4-204ENST00000392025 XBP1P17861 261 aa21.43■■□□□ 1.02
SPTBN4-204ENST00000392025 AXDND1Q5T1B0 1012 aaPredicted RBP21.43■■□□□ 1.02
SPTBN4-204ENST00000392025 DHX16O60231 1041 aaKnown RBP21.42■■□□□ 1.02
SPTBN4-204ENST00000392025 KIF3BO15066 747 aa21.41■■□□□ 1.02
SPTBN4-204ENST00000392025 HSPA5P11021 654 aaKnown RBP21.41■■□□□ 1.02
SPTBN4-204ENST00000392025 RBM33Q96EV2 1170 aaKnown RBP21.41■■□□□ 1.02
SPTBN4-204ENST00000392025 SMARCE1Q969G3 411 aa21.41■■□□□ 1.02
SPTBN4-204ENST00000392025 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
SPTBN4-204ENST00000392025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.41■■□□□ 1.02
SPTBN4-204ENST00000392025 LTV1Q96GA3 475 aaPredicted RBP21.4■■□□□ 1.02
SPTBN4-204ENST00000392025 MPHOSPH9Q99550 1183 aa21.4■■□□□ 1.02
SPTBN4-204ENST00000392025 EZRP15311 586 aaKnown RBP21.4■■□□□ 1.02
SPTBN4-204ENST00000392025 FOXD1Q16676 465 aa21.4■■□□□ 1.02
SPTBN4-204ENST00000392025 NGEFQ8N5V2 710 aa21.4■■□□□ 1.02
SPTBN4-204ENST00000392025 BICD2Q8TD16 824 aa21.4■■□□□ 1.02
SPTBN4-204ENST00000392025 NAP1L1P55209 391 aaKnown RBP21.39■■□□□ 1.02
SPTBN4-204ENST00000392025 CCDC73Q6ZRK6 1079 aa21.39■■□□□ 1.02
SPTBN4-204ENST00000392025 SOGA1O94964 1423 aa21.39■■□□□ 1.01
SPTBN4-204ENST00000392025 FOXD4L1Q9NU39 408 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms