RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 TRPM2O94759 1503 aa19.57■□□□□ 0.72
MRPL55-219ENST00000391867 RAB3GAP2Q9H2M9 1393 aa19.57■□□□□ 0.72
MRPL55-219ENST00000391867 PPP1R15AO75807 674 aaPredicted RBP19.56■□□□□ 0.72
MRPL55-219ENST00000391867 BCANQ96GW7 911 aa19.56■□□□□ 0.72
MRPL55-219ENST00000391867 SLC26A8Q96RN1 970 aa19.56■□□□□ 0.72
MRPL55-219ENST00000391867 STRCP1A6NGW2 1772 aa19.55■□□□□ 0.72
MRPL55-219ENST00000391867 MPHOSPH9Q99550 1183 aa19.54■□□□□ 0.72
MRPL55-219ENST00000391867 CPS1P31327 1500 aa19.52■□□□□ 0.72
MRPL55-219ENST00000391867 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.72
MRPL55-219ENST00000391867 IQSEC2Q5JU85 1478 aa19.5■□□□□ 0.71
MRPL55-219ENST00000391867 PLEKHG1Q9ULL1 1385 aa19.5■□□□□ 0.71
MRPL55-219ENST00000391867 HDGFP51858 240 aaKnown RBP19.49■□□□□ 0.71
MRPL55-219ENST00000391867 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.49■□□□□ 0.71
MRPL55-219ENST00000391867 KIF1BO60333 1816 aa19.47■□□□□ 0.71
MRPL55-219ENST00000391867 LRRC7Q96NW7 1537 aa19.46■□□□□ 0.71
MRPL55-219ENST00000391867 UBAP1LF5GYI3 381 aa19.46■□□□□ 0.71
MRPL55-219ENST00000391867 ADAMTS13Q76LX8 1427 aa19.44■□□□□ 0.7
MRPL55-219ENST00000391867 NEXMIFQ5QGS0 1516 aa19.44■□□□□ 0.7
MRPL55-219ENST00000391867 CCDC144AA2RUR9 1427 aa19.43■□□□□ 0.7
MRPL55-219ENST00000391867 KCNA6P17658 529 aa19.42■□□□□ 0.7
MRPL55-219ENST00000391867 RBM33Q96EV2 1170 aaKnown RBP19.42■□□□□ 0.7
MRPL55-219ENST00000391867 ACIN1Q9UKV3 1341 aaKnown RBP19.4■□□□□ 0.7
MRPL55-219ENST00000391867 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
MRPL55-219ENST00000391867 TBX22Q9Y458 520 aa19.39■□□□□ 0.69
MRPL55-219ENST00000391867 NWD1Q149M9 1564 aa19.39■□□□□ 0.69
MRPL55-219ENST00000391867 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
MRPL55-219ENST00000391867 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
MRPL55-219ENST00000391867 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
MRPL55-219ENST00000391867 DIP2AQ14689 1571 aa19.37■□□□□ 0.69
MRPL55-219ENST00000391867 TMEM94Q12767 1356 aa19.37■□□□□ 0.69
MRPL55-219ENST00000391867 PIP4K2BP78356 416 aa19.37■□□□□ 0.69
MRPL55-219ENST00000391867 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
MRPL55-219ENST00000391867 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
MRPL55-219ENST00000391867 ALKQ9UM73 1620 aa19.36■□□□□ 0.69
MRPL55-219ENST00000391867 SPATA31E1Q6ZUB1 1445 aa19.35■□□□□ 0.69
MRPL55-219ENST00000391867 CHD2O14647 1828 aaKnown RBP19.35■□□□□ 0.69
MRPL55-219ENST00000391867 NKTRP30414 1462 aaKnown RBP19.35■□□□□ 0.69
MRPL55-219ENST00000391867 TOM1O60784 492 aa19.34■□□□□ 0.69
MRPL55-219ENST00000391867 PPLO60437 1756 aa19.34■□□□□ 0.69
MRPL55-219ENST00000391867 PTPRUQ92729 1446 aa19.34■□□□□ 0.69
MRPL55-219ENST00000391867 METP08581 1390 aa19.33■□□□□ 0.69
MRPL55-219ENST00000391867 HRCP23327 699 aa19.33■□□□□ 0.68
MRPL55-219ENST00000391867 RPGRIP1LQ68CZ1 1315 aa19.32■□□□□ 0.68
MRPL55-219ENST00000391867 VGFO15240 615 aaPredicted RBP19.31■□□□□ 0.68
MRPL55-219ENST00000391867 ANKRD30BQ9BXX2 1392 aa19.31■□□□□ 0.68
MRPL55-219ENST00000391867 ADGRF5Q8IZF2 1346 aa19.3■□□□□ 0.68
MRPL55-219ENST00000391867 AMOTL2Q9Y2J4 779 aa19.3■□□□□ 0.68
MRPL55-219ENST00000391867 PIK3R4Q99570 1358 aa19.3■□□□□ 0.68
MRPL55-219ENST00000391867 IFT172Q9UG01 1749 aa19.27■□□□□ 0.68
MRPL55-219ENST00000391867 XRN1Q8IZH2 1706 aaKnown RBP19.26■□□□□ 0.67
MRPL55-219ENST00000391867 C14orf37Q86TY3 774 aa19.26■□□□□ 0.67
MRPL55-219ENST00000391867 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
MRPL55-219ENST00000391867 MSH6P52701 1360 aa19.24■□□□□ 0.67
MRPL55-219ENST00000391867 HSPA1LP34931 641 aa19.24■□□□□ 0.67
MRPL55-219ENST00000391867 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
MRPL55-219ENST00000391867 PIK3C2GO75747 1445 aa19.19■□□□□ 0.66
MRPL55-219ENST00000391867 KDM2AQ9Y2K7 1162 aa19.18■□□□□ 0.66
MRPL55-219ENST00000391867 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
MRPL55-219ENST00000391867 NCOA3Q9Y6Q9 1424 aa19.17■□□□□ 0.66
MRPL55-219ENST00000391867 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.17■□□□□ 0.66
MRPL55-219ENST00000391867 MYOM2P54296 1465 aa19.17■□□□□ 0.66
MRPL55-219ENST00000391867 TMEM132EQ6IEE7 984 aa19.17■□□□□ 0.66
MRPL55-219ENST00000391867 ASXL1Q8IXJ9 1541 aa19.16■□□□□ 0.66
MRPL55-219ENST00000391867 STK26Q9P289 416 aa19.16■□□□□ 0.66
MRPL55-219ENST00000391867 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
MRPL55-219ENST00000391867 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
MRPL55-219ENST00000391867 NRXN1Q9ULB1 1477 aa19.15■□□□□ 0.66
MRPL55-219ENST00000391867 ROBO1Q9Y6N7 1651 aa19.14■□□□□ 0.66
MRPL55-219ENST00000391867 CFAP70Q5T0N1 1121 aa19.14■□□□□ 0.65
MRPL55-219ENST00000391867 SLAIN2Q9P270 581 aa19.14■□□□□ 0.65
MRPL55-219ENST00000391867 PTCH1Q13635 1447 aa19.14■□□□□ 0.65
MRPL55-219ENST00000391867 ATF3P18847 181 aa19.13■□□□□ 0.65
MRPL55-219ENST00000391867 FAM135BQ49AJ0 1406 aa19.13■□□□□ 0.65
MRPL55-219ENST00000391867 NALCNQ8IZF0 1738 aa19.12■□□□□ 0.65
MRPL55-219ENST00000391867 DHX57Q6P158 1386 aaKnown RBP19.12■□□□□ 0.65
MRPL55-219ENST00000391867 ADGRL3Q9HAR2 1447 aa19.11■□□□□ 0.65
MRPL55-219ENST00000391867 CADPS2Q86UW7 1296 aa19.11■□□□□ 0.65
MRPL55-219ENST00000391867 C14orf93Q9H972 538 aaKnown RBP19.11■□□□□ 0.65
MRPL55-219ENST00000391867 LRPPRCP42704 1394 aaKnown RBP19.1■□□□□ 0.65
MRPL55-219ENST00000391867 PRAG1Q86YV5 1406 aa19.09■□□□□ 0.65
MRPL55-219ENST00000391867 YTHDC2Q9H6S0 1430 aaKnown RBP19.08■□□□□ 0.65
MRPL55-219ENST00000391867 WAPLQ7Z5K2 1190 aa19.08■□□□□ 0.64
MRPL55-219ENST00000391867 SIN3AQ96ST3 1273 aa19.08■□□□□ 0.64
MRPL55-219ENST00000391867 DCCP43146 1447 aa19.08■□□□□ 0.64
MRPL55-219ENST00000391867 LAMC1P11047 1609 aa19.07■□□□□ 0.64
MRPL55-219ENST00000391867 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
MRPL55-219ENST00000391867 TECPR2O15040 1411 aa19.06■□□□□ 0.64
MRPL55-219ENST00000391867 MST1RQ04912 1400 aa19.06■□□□□ 0.64
MRPL55-219ENST00000391867 NEUROD1Q13562 356 aa19.05■□□□□ 0.64
MRPL55-219ENST00000391867 KNDC1Q76NI1 1749 aa19.05■□□□□ 0.64
MRPL55-219ENST00000391867 ABCC11Q96J66 1382 aa19.05■□□□□ 0.64
MRPL55-219ENST00000391867 DISP3Q9P2K9 1392 aa19.04■□□□□ 0.64
MRPL55-219ENST00000391867 ADGRB1O14514 1584 aa19.03■□□□□ 0.64
MRPL55-219ENST00000391867 BRINP3Q76B58 766 aa19.03■□□□□ 0.64
MRPL55-219ENST00000391867 PHLPP1O60346 1717 aa19.02■□□□□ 0.63
MRPL55-219ENST00000391867 SAFB2Q14151 953 aaKnown RBP eCLIP19.01■□□□□ 0.63
MRPL55-219ENST00000391867 MED1Q15648 1581 aaPredicted RBP18.99■□□□□ 0.63
MRPL55-219ENST00000391867 C1orf167Q5SNV9 1468 aa18.99■□□□□ 0.63
MRPL55-219ENST00000391867 PRAM1Q96QH2 718 aa18.99■□□□□ 0.63
MRPL55-219ENST00000391867 TRAK1Q9UPV9 953 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms