RNA–Protein interactions for RNA: ENST00000391143.1

SNORA48.5-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.5-201ENST00000391143 P3H3Q8IVL6 736 aa5.62□□□□□ -1.51
SNORA48.5-201ENST00000391143 FAM9AQ8IZU1 332 aaPredicted RBP5.62□□□□□ -1.51
SNORA48.5-201ENST00000391143 NCKAP5LQ9HCH0 1330 aa5.62□□□□□ -1.51
SNORA48.5-201ENST00000391143 C9orf84Q5VXU9 1444 aa5.62□□□□□ -1.51
SNORA48.5-201ENST00000391143 ATP10AO60312 1499 aa5.62□□□□□ -1.51
SNORA48.5-201ENST00000391143 CFAP74Q9C0B2 1584 aa5.62□□□□□ -1.51
SNORA48.5-201ENST00000391143 CAMSAP1Q5T5Y3 1602 aa5.62□□□□□ -1.51
SNORA48.5-201ENST00000391143 CTTNBP2Q8WZ74 1663 aa5.62□□□□□ -1.51
SNORA48.5-201ENST00000391143 TOM1O60784 492 aa5.61□□□□□ -1.51
SNORA48.5-201ENST00000391143 C3P01024 1663 aa5.61□□□□□ -1.51
SNORA48.5-201ENST00000391143 HOXB1P14653 301 aaPredicted RBP5.61□□□□□ -1.51
SNORA48.5-201ENST00000391143 ERBB3P21860 1342 aa5.61□□□□□ -1.51
SNORA48.5-201ENST00000391143 HS3ST6Q96QI5 342 aa5.61□□□□□ -1.51
SNORA48.5-201ENST00000391143 RGS17Q9UGC6 210 aaPredicted RBP5.61□□□□□ -1.51
SNORA48.5-201ENST00000391143 TRAPPC8Q9Y2L5 1435 aa5.61□□□□□ -1.51
SNORA48.5-201ENST00000391143 SCAPERQ9BY12 1400 aa5.6□□□□□ -1.51
SNORA48.5-201ENST00000391143 PLEKHD1A6NEE1 506 aa5.59□□□□□ -1.51
SNORA48.5-201ENST00000391143 ARSIQ5FYB1 569 aa5.59□□□□□ -1.51
SNORA48.5-201ENST00000391143 RYDENQ9NUL5 291 aaKnown RBP5.59□□□□□ -1.51
SNORA48.5-201ENST00000391143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNORA48.5-201ENST00000391143 POTEB3A0JP26 581 aa5.58□□□□□ -1.52
SNORA48.5-201ENST00000391143 KIF3CO14782 793 aa5.58□□□□□ -1.52
SNORA48.5-201ENST00000391143 VARS2Q5ST30 1063 aaKnown RBP5.58□□□□□ -1.52
SNORA48.5-201ENST00000391143 POTEBQ6S5H4 581 aa5.58□□□□□ -1.52
SNORA48.5-201ENST00000391143 ESF1Q9H501 851 aaKnown RBP5.58□□□□□ -1.52
SNORA48.5-201ENST00000391143 ZSWIM6Q9HCJ5 1215 aa5.58□□□□□ -1.52
SNORA48.5-201ENST00000391143 RAPGEF6Q8TEU7 1601 aa5.58□□□□□ -1.52
SNORA48.5-201ENST00000391143 SRCAPQ6ZRS2 3230 aa5.57□□□□□ -1.52
SNORA48.5-201ENST00000391143 KHSRPQ92945 711 aaKnown RBP eCLIP5.57□□□□□ -1.52
SNORA48.5-201ENST00000391143 NUP153P49790 1475 aaKnown RBP5.57□□□□□ -1.52
SNORA48.5-201ENST00000391143 GPR153Q6NV75 609 aa5.56□□□□□ -1.52
SNORA48.5-201ENST00000391143 POTEAQ6S8J7 498 aa5.56□□□□□ -1.52
SNORA48.5-201ENST00000391143 MYT1LQ9UL68 1186 aa5.56□□□□□ -1.52
SNORA48.5-201ENST00000391143 PLA2R1Q13018 1463 aa5.56□□□□□ -1.52
SNORA48.5-201ENST00000391143 TCOF1Q13428 1488 aaKnown RBP5.56□□□□□ -1.52
SNORA48.5-201ENST00000391143 AMER1Q5JTC6 1135 aaPredicted RBP5.55□□□□□ -1.52
SNORA48.5-201ENST00000391143 PLCH2O75038 1416 aa5.55□□□□□ -1.52
SNORA48.5-201ENST00000391143 NPATQ14207 1427 aa5.55□□□□□ -1.52
SNORA48.5-201ENST00000391143 PTPRKQ15262 1439 aa5.55□□□□□ -1.52
SNORA48.5-201ENST00000391143 ALKQ9UM73 1620 aa5.55□□□□□ -1.52
SNORA48.5-201ENST00000391143 CPS1P31327 1500 aa5.54□□□□□ -1.52
SNORA48.5-201ENST00000391143 AGLP35573 1532 aa5.54□□□□□ -1.52
SNORA48.5-201ENST00000391143 GTPBP6O43824 516 aaPredicted RBP5.54□□□□□ -1.52
SNORA48.5-201ENST00000391143 NUDT7P0C024 238 aa5.54□□□□□ -1.52
SNORA48.5-201ENST00000391143 AFAP1Q8N556 730 aa5.54□□□□□ -1.52
SNORA48.5-201ENST00000391143 RTN4Q9NQC3 1192 aaKnown RBP5.54□□□□□ -1.52
SNORA48.5-201ENST00000391143 REREQ9P2R6 1566 aa5.54□□□□□ -1.52
SNORA48.5-201ENST00000391143 DIP2CQ9Y2E4 1556 aa5.54□□□□□ -1.52
SNORA48.5-201ENST00000391143 SUPT6HQ7KZ85 1726 aaKnown RBP5.54□□□□□ -1.52
SNORA48.5-201ENST00000391143 ZNF518AQ6AHZ1 1483 aa5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 SHANK2Q9UPX8 1470 aa5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 DSG2Q14126 1118 aa5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 EFCAB2Q5VUJ9 269 aa5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 PLPP6Q8IY26 295 aa5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 GPHNQ9NQX3 736 aaPredicted RBP5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 PCDHGA4Q9Y5G9 962 aa5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 CNTLNQ9NXG0 1405 aa5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 SETD1AO15047 1707 aaKnown RBP5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 ZMYM3Q14202 1370 aa5.53□□□□□ -1.52
SNORA48.5-201ENST00000391143 KDM5CP41229 1560 aa5.52□□□□□ -1.53
SNORA48.5-201ENST00000391143 FOXK1P85037 733 aa5.52□□□□□ -1.53
SNORA48.5-201ENST00000391143 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
SNORA48.5-201ENST00000391143 KRTAP3-2Q9BYR7 98 aa5.52□□□□□ -1.53
SNORA48.5-201ENST00000391143 ZNF142P52746 1687 aaPredicted RBP5.52□□□□□ -1.53
SNORA48.5-201ENST00000391143 ABCA6Q8N139 1617 aa5.52□□□□□ -1.53
SNORA48.5-201ENST00000391143 MYO3AQ8NEV4 1616 aa5.52□□□□□ -1.53
SNORA48.5-201ENST00000391143 SAMD9Q5K651 1589 aa5.51□□□□□ -1.53
SNORA48.5-201ENST00000391143 CEP170BQ9Y4F5 1589 aaPredicted RBP5.51□□□□□ -1.53
SNORA48.5-201ENST00000391143 MROH2AA6NES4 1674 aa5.51□□□□□ -1.53
SNORA48.5-201ENST00000391143 ZNF316A6NFI3 1004 aaPredicted RBP5.51□□□□□ -1.53
SNORA48.5-201ENST00000391143 SLC34A2O95436 690 aa5.51□□□□□ -1.53
SNORA48.5-201ENST00000391143 SPNS2Q8IVW8 549 aa5.51□□□□□ -1.53
SNORA48.5-201ENST00000391143 UPF1Q92900 1129 aaKnown RBP eCLIP5.51□□□□□ -1.53
SNORA48.5-201ENST00000391143 LHX6Q9UPM6 363 aa5.5□□□□□ -1.53
SNORA48.5-201ENST00000391143 PRXQ9BXM0 1461 aa5.5□□□□□ -1.53
SNORA48.5-201ENST00000391143 MLH3Q9UHC1 1453 aa5.5□□□□□ -1.53
SNORA48.5-201ENST00000391143 MYO5CQ9NQX4 1742 aa5.49□□□□□ -1.53
SNORA48.5-201ENST00000391143 ZNF687Q8N1G0 1237 aa5.49□□□□□ -1.53
SNORA48.5-201ENST00000391143 VWDEQ8N2E2 1590 aa5.49□□□□□ -1.53
SNORA48.5-201ENST00000391143 NEURL4Q96JN8 1562 aa5.49□□□□□ -1.53
SNORA48.5-201ENST00000391143 CDK13Q14004 1512 aaKnown RBP5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 DNMT1P26358 1616 aaKnown RBP5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 PDE4AP27815 886 aa5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 RANGAP1P46060 587 aaPredicted RBP5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 MMRN1Q13201 1228 aa5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 PPP1R15BQ5SWA1 713 aa5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 LARP6Q9BRS8 491 aaKnown RBP5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 CRISPLD2Q9H0B8 497 aa5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 POLR1AO95602 1720 aaPredicted RBP5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 ARHGAP5Q13017 1502 aa5.48□□□□□ -1.53
SNORA48.5-201ENST00000391143 CLTCQ00610 1675 aaKnown RBP5.47□□□□□ -1.53
SNORA48.5-201ENST00000391143 A2ML1A8K2U0 1454 aa5.47□□□□□ -1.53
SNORA48.5-201ENST00000391143 TBC1D12O60347 775 aa5.47□□□□□ -1.53
SNORA48.5-201ENST00000391143 ANKRD13DQ6ZTN6 518 aa5.47□□□□□ -1.53
SNORA48.5-201ENST00000391143 PTCD2Q8WV60 388 aaKnown RBP5.47□□□□□ -1.53
SNORA48.5-201ENST00000391143 BBXQ8WY36 941 aaPredicted RBP5.47□□□□□ -1.53
SNORA48.5-201ENST00000391143 LRRC7Q96NW7 1537 aa5.47□□□□□ -1.53
SNORA48.5-201ENST00000391143 KIDINS220Q9ULH0 1771 aa5.47□□□□□ -1.53
SNORA48.5-201ENST00000391143 RNF17Q9BXT8 1623 aaKnown RBP5.46□□□□□ -1.54
SNORA48.5-201ENST00000391143 ANKLE2Q86XL3 938 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms