RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
SNRPN-202ENST00000390687 BCANQ96GW7 911 aa22.33■■□□□ 1.17
SNRPN-202ENST00000390687 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
SNRPN-202ENST00000390687 NUTM2DQ5VT03 806 aaPredicted RBP22.32■■□□□ 1.16
SNRPN-202ENST00000390687 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.32■■□□□ 1.16
SNRPN-202ENST00000390687 SPHKAPQ2M3C7 1700 aa22.32■■□□□ 1.16
SNRPN-202ENST00000390687 LRRC7Q96NW7 1537 aa22.32■■□□□ 1.16
SNRPN-202ENST00000390687 PLEKHG1Q9ULL1 1385 aa22.3■■□□□ 1.16
SNRPN-202ENST00000390687 KCNA6P17658 529 aa22.29■■□□□ 1.16
SNRPN-202ENST00000390687 TOM1O60784 492 aa22.28■■□□□ 1.16
SNRPN-202ENST00000390687 TRPM2O94759 1503 aa22.26■■□□□ 1.15
SNRPN-202ENST00000390687 TBX22Q9Y458 520 aa22.26■■□□□ 1.15
SNRPN-202ENST00000390687 FOXD1Q16676 465 aa22.25■■□□□ 1.15
SNRPN-202ENST00000390687 ZNF326Q5BKZ1 582 aaKnown RBP22.25■■□□□ 1.15
SNRPN-202ENST00000390687 PIP4K2BP78356 416 aa22.24■■□□□ 1.15
SNRPN-202ENST00000390687 MPHOSPH9Q99550 1183 aa22.24■■□□□ 1.15
SNRPN-202ENST00000390687 CLTCL1P53675 1640 aa22.24■■□□□ 1.15
SNRPN-202ENST00000390687 SETD5Q9C0A6 1442 aa22.23■■□□□ 1.15
SNRPN-202ENST00000390687 ADAMTS13Q76LX8 1427 aa22.21■■□□□ 1.15
SNRPN-202ENST00000390687 PROSER2Q86WR7 435 aaPredicted RBP22.21■■□□□ 1.15
SNRPN-202ENST00000390687 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.15
SNRPN-202ENST00000390687 ALKQ9UM73 1620 aa22.2■■□□□ 1.14
SNRPN-202ENST00000390687 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
SNRPN-202ENST00000390687 XIRP1Q702N8 1843 aaKnown RBP22.18■■□□□ 1.14
SNRPN-202ENST00000390687 TMEM94Q12767 1356 aa22.18■■□□□ 1.14
SNRPN-202ENST00000390687 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
SNRPN-202ENST00000390687 CHD2O14647 1828 aaKnown RBP22.16■■□□□ 1.14
SNRPN-202ENST00000390687 KIF1BO60333 1816 aa22.16■■□□□ 1.14
SNRPN-202ENST00000390687 NWD1Q149M9 1564 aa22.15■■□□□ 1.14
SNRPN-202ENST00000390687 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
SNRPN-202ENST00000390687 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
SNRPN-202ENST00000390687 NKTRP30414 1462 aaKnown RBP22.14■■□□□ 1.13
SNRPN-202ENST00000390687 HSPA1LP34931 641 aa22.13■■□□□ 1.13
SNRPN-202ENST00000390687 PIK3R4Q99570 1358 aa22.13■■□□□ 1.13
SNRPN-202ENST00000390687 DIP2AQ14689 1571 aa22.12■■□□□ 1.13
SNRPN-202ENST00000390687 AMOTL2Q9Y2J4 779 aa22.11■■□□□ 1.13
SNRPN-202ENST00000390687 NRXN3Q9Y4C0 1643 aa22.1■■□□□ 1.13
SNRPN-202ENST00000390687 RPGRIP1LQ68CZ1 1315 aa22.1■■□□□ 1.13
SNRPN-202ENST00000390687 SETBP1Q9Y6X0 1596 aa22.1■■□□□ 1.13
SNRPN-202ENST00000390687 VGFO15240 615 aaPredicted RBP22.1■■□□□ 1.13
SNRPN-202ENST00000390687 CCDC144AA2RUR9 1427 aa22.09■■□□□ 1.13
SNRPN-202ENST00000390687 PTPRUQ92729 1446 aa22.09■■□□□ 1.13
SNRPN-202ENST00000390687 METP08581 1390 aa22.07■■□□□ 1.12
SNRPN-202ENST00000390687 HRCP23327 699 aa22.06■■□□□ 1.12
SNRPN-202ENST00000390687 RGL3Q3MIN7 710 aa22.06■■□□□ 1.12
SNRPN-202ENST00000390687 MSH6P52701 1360 aa22.04■■□□□ 1.12
SNRPN-202ENST00000390687 SPATA31E1Q6ZUB1 1445 aa22.03■■□□□ 1.12
SNRPN-202ENST00000390687 NCOA3Q9Y6Q9 1424 aa22.03■■□□□ 1.12
SNRPN-202ENST00000390687 FAM135BQ49AJ0 1406 aa22.01■■□□□ 1.11
SNRPN-202ENST00000390687 C14orf37Q86TY3 774 aa22.01■■□□□ 1.11
SNRPN-202ENST00000390687 SLAIN2Q9P270 581 aa22.01■■□□□ 1.11
SNRPN-202ENST00000390687 PPLO60437 1756 aa22■■□□□ 1.11
SNRPN-202ENST00000390687 C19orf44Q9H6X5 657 aa22■■□□□ 1.11
SNRPN-202ENST00000390687 ADGRF5Q8IZF2 1346 aa21.99■■□□□ 1.11
SNRPN-202ENST00000390687 DISP3Q9P2K9 1392 aa21.97■■□□□ 1.11
SNRPN-202ENST00000390687 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
SNRPN-202ENST00000390687 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
SNRPN-202ENST00000390687 ATF3P18847 181 aa21.94■■□□□ 1.1
SNRPN-202ENST00000390687 CADPS2Q86UW7 1296 aa21.94■■□□□ 1.1
SNRPN-202ENST00000390687 SETD1AO15047 1707 aaKnown RBP21.93■■□□□ 1.1
SNRPN-202ENST00000390687 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.93■■□□□ 1.1
SNRPN-202ENST00000390687 ROBO1Q9Y6N7 1651 aa21.91■■□□□ 1.1
SNRPN-202ENST00000390687 IFT172Q9UG01 1749 aa21.9■■□□□ 1.1
SNRPN-202ENST00000390687 ROBO2Q9HCK4 1378 aa21.89■■□□□ 1.09
SNRPN-202ENST00000390687 PIK3C2GO75747 1445 aa21.86■■□□□ 1.09
SNRPN-202ENST00000390687 DCCP43146 1447 aa21.85■■□□□ 1.09
SNRPN-202ENST00000390687 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
SNRPN-202ENST00000390687 TMEM132EQ6IEE7 984 aa21.85■■□□□ 1.09
SNRPN-202ENST00000390687 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
SNRPN-202ENST00000390687 ADGRL3Q9HAR2 1447 aa21.84■■□□□ 1.09
SNRPN-202ENST00000390687 ILDR2Q71H61 639 aa21.83■■□□□ 1.09
SNRPN-202ENST00000390687 C14orf93Q9H972 538 aaKnown RBP21.83■■□□□ 1.09
SNRPN-202ENST00000390687 STK26Q9P289 416 aa21.83■■□□□ 1.09
SNRPN-202ENST00000390687 CFAP70Q5T0N1 1121 aa21.81■■□□□ 1.08
SNRPN-202ENST00000390687 BRINP3Q76B58 766 aa21.81■■□□□ 1.08
SNRPN-202ENST00000390687 NRXN1Q9ULB1 1477 aa21.81■■□□□ 1.08
SNRPN-202ENST00000390687 MED1Q15648 1581 aaPredicted RBP21.81■■□□□ 1.08
SNRPN-202ENST00000390687 LRPPRCP42704 1394 aaKnown RBP21.8■■□□□ 1.08
SNRPN-202ENST00000390687 MST1RQ04912 1400 aa21.8■■□□□ 1.08
SNRPN-202ENST00000390687 MYOM2P54296 1465 aa21.8■■□□□ 1.08
SNRPN-202ENST00000390687 NALCNQ8IZF0 1738 aa21.79■■□□□ 1.08
SNRPN-202ENST00000390687 DCAF11Q8TEB1 546 aa21.79■■□□□ 1.08
SNRPN-202ENST00000390687 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
SNRPN-202ENST00000390687 ABCC11Q96J66 1382 aa21.78■■□□□ 1.08
SNRPN-202ENST00000390687 ASXL1Q8IXJ9 1541 aa21.78■■□□□ 1.08
SNRPN-202ENST00000390687 WAPLQ7Z5K2 1190 aa21.78■■□□□ 1.08
SNRPN-202ENST00000390687 PHLPP1O60346 1717 aa21.77■■□□□ 1.08
SNRPN-202ENST00000390687 TECPR2O15040 1411 aa21.76■■□□□ 1.07
SNRPN-202ENST00000390687 YTHDC2Q9H6S0 1430 aaKnown RBP21.75■■□□□ 1.07
SNRPN-202ENST00000390687 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
SNRPN-202ENST00000390687 STAC3Q96MF2 364 aa21.74■■□□□ 1.07
SNRPN-202ENST00000390687 SIRT1Q96EB6 747 aa21.73■■□□□ 1.07
SNRPN-202ENST00000390687 PLEKHH1Q9ULM0 1364 aa21.72■■□□□ 1.07
SNRPN-202ENST00000390687 COL16A1Q07092 1604 aaPredicted RBP21.72■■□□□ 1.07
SNRPN-202ENST00000390687 AHDC1Q5TGY3 1603 aaPredicted RBP21.72■■□□□ 1.07
SNRPN-202ENST00000390687 C1orf167Q5SNV9 1468 aa21.72■■□□□ 1.07
SNRPN-202ENST00000390687 JCADQ9P266 1359 aa21.72■■□□□ 1.07
SNRPN-202ENST00000390687 ORAI2Q96SN7 254 aa21.7■■□□□ 1.07
SNRPN-202ENST00000390687 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.07
SNRPN-202ENST00000390687 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms