RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.12■□□□□ 0.492e-53■■■■■ 172.3
SNRPN-202ENST00000390687 PCBP2Q15366 365 aaKnown RBP eCLIP13.98□□□□□ -0.176e-10■■■■■ 41.1
SNRPN-202ENST00000390687 QKIQ96PU8 341 aaKnown RBP eCLIP14.82□□□□□ -0.044e-11■■■■■ 35.5
SNRPN-202ENST00000390687 CSTF2P33240 577 aaKnown RBP eCLIP14.61□□□□□ -0.073e-6■■■■■ 27
SNRPN-202ENST00000390687 GTF2F1P35269 517 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■■■□ 23.7
SNRPN-202ENST00000390687 TIAL1Q01085 375 aaKnown RBP eCLIP14.32□□□□□ -0.125e-6■■■■□ 19.9
SNRPN-202ENST00000390687 RBFOX2O43251 390 aaKnown RBP eCLIP11.45□□□□□ -0.586e-7■■■■□ 19.8
SNRPN-202ENST00000390687 HNRNPCP07910 306 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■■□ 19.6
SNRPN-202ENST00000390687 PRPF4O43172 522 aaKnown RBP eCLIP14.13□□□□□ -0.151e-5■■■■□ 19.3
SNRPN-202ENST00000390687 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.71□□□□□ -0.379e-11■■■□□ 19.2
SNRPN-202ENST00000390687 LARP4Q71RC2 724 aaKnown RBP eCLIP13.59□□□□□ -0.233e-8■■■□□ 16.5
SNRPN-202ENST00000390687 EFTUD2Q15029 972 aaKnown RBP eCLIP14.11□□□□□ -0.152e-7■■■□□ 16.1
SNRPN-202ENST00000390687 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■■□□□ 13.3
SNRPN-202ENST00000390687 ILF3Q12906 894 aaKnown RBP eCLIP14.79□□□□□ -0.047e-7■■□□□ 13.2
SNRPN-202ENST00000390687 KHSRPQ92945 711 aaKnown RBP eCLIP16.36■□□□□ 0.211e-7■■□□□ 13
SNRPN-202ENST00000390687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.86■□□□□ 0.295e-7■■□□□ 13
SNRPN-202ENST00000390687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.262e-8■■□□□ 12.6
SNRPN-202ENST00000390687 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.266e-7■■□□□ 11.7
SNRPN-202ENST00000390687 HNRNPKP61978 463 aaKnown RBP eCLIP14.97□□□□□ -0.018e-6■■□□□ 11.5
SNRPN-202ENST00000390687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.843e-8■□□□□ 11.3
SNRPN-202ENST00000390687 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.12■□□□□ 0.179e-9■□□□□ 10.8
SNRPN-202ENST00000390687 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.78□□□□□ -0.23e-9■□□□□ 10.7
SNRPN-202ENST00000390687 AQRO60306 1485 aaKnown RBP eCLIP26.38■■□□□ 1.811e-6■□□□□ 10.6
SNRPN-202ENST00000390687 PPIGQ13427 754 aaKnown RBP eCLIP17.1■□□□□ 0.339e-11■□□□□ 10.2
SNRPN-202ENST00000390687 HNRNPMP52272 730 aaKnown RBP eCLIP23.62■■□□□ 1.376e-7■□□□□ 9.7
SNRPN-202ENST00000390687 SRSF1Q07955 248 aaKnown RBP eCLIP14.01□□□□□ -0.172e-9■□□□□ 9.4
SNRPN-202ENST00000390687 RPS3P23396 243 aaKnown RBP eCLIP14.44□□□□□ -0.15e-6■□□□□ 9.1
SNRPN-202ENST00000390687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.18■□□□□ 0.022e-9■□□□□ 9
Retrieved 28 of 28 RNA–protein pairs in 3.2 ms