RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 MYBBP1AQ9BQG0 1328 aaKnown RBP24.29■■□□□ 1.48
PPFIA1-202ENST00000389547 CABP2Q9NPB3 220 aa24.29■■□□□ 1.48
PPFIA1-202ENST00000389547 PZPP20742 1482 aa24.28■■□□□ 1.48
PPFIA1-202ENST00000389547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.28■■□□□ 1.481e-8■■■■□ 24.3
PPFIA1-202ENST00000389547 HSP90AA2PQ14568 343 aaPredicted RBP24.28■■□□□ 1.48
PPFIA1-202ENST00000389547 BECN1Q14457 450 aa24.27■■□□□ 1.48
PPFIA1-202ENST00000389547 SLC52A1Q9NWF4 448 aa24.27■■□□□ 1.48
PPFIA1-202ENST00000389547 KDM6BO15054 1643 aa24.26■■□□□ 1.47
PPFIA1-202ENST00000389547 U2AF1L5P0DN76 240 aaPredicted RBP24.26■■□□□ 1.47
PPFIA1-202ENST00000389547 U2AF1Q01081 240 aaKnown RBP eCLIP24.26■■□□□ 1.477e-8■■■■■ 45.8
PPFIA1-202ENST00000389547 ZBED9Q6R2W3 1325 aa24.26■■□□□ 1.47
PPFIA1-202ENST00000389547 EVC2Q86UK5 1308 aa24.26■■□□□ 1.47
PPFIA1-202ENST00000389547 MBD5Q9P267 1494 aa24.25■■□□□ 1.47
PPFIA1-202ENST00000389547 CEBPAP49715 358 aaPredicted RBP24.24■■□□□ 1.47
PPFIA1-202ENST00000389547 FRAT1Q92837 279 aaPredicted RBP24.24■■□□□ 1.47
PPFIA1-202ENST00000389547 TERF2IPQ9NYB0 399 aa24.24■■□□□ 1.47
PPFIA1-202ENST00000389547 SLC12A5Q9H2X9 1139 aa24.23■■□□□ 1.47
PPFIA1-202ENST00000389547 KDM5BQ9UGL1 1544 aa24.23■■□□□ 1.47
PPFIA1-202ENST00000389547 MAPK8IP3Q9UPT6 1336 aa24.23■■□□□ 1.47
PPFIA1-202ENST00000389547 FAM135AQ9P2D6 1515 aa24.22■■□□□ 1.47
PPFIA1-202ENST00000389547 NFKBIBQ15653 356 aa24.22■■□□□ 1.47
PPFIA1-202ENST00000389547 DUOX2Q9NRD8 1548 aa24.2■■□□□ 1.47
PPFIA1-202ENST00000389547 L1TD1Q5T7N2 865 aaKnown RBP24.2■■□□□ 1.46
PPFIA1-202ENST00000389547 SHANK2Q9UPX8 1470 aa24.2■■□□□ 1.46
PPFIA1-202ENST00000389547 PRAM1Q96QH2 718 aa24.2■■□□□ 1.46
PPFIA1-202ENST00000389547 EXOC6Q8TAG9 804 aa24.19■■□□□ 1.46
PPFIA1-202ENST00000389547 SLKQ9H2G2 1235 aaPredicted RBP24.19■■□□□ 1.46
PPFIA1-202ENST00000389547 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.19■■□□□ 1.46
PPFIA1-202ENST00000389547 A2MP01023 1474 aa24.18■■□□□ 1.46
PPFIA1-202ENST00000389547 ZNF518AQ6AHZ1 1483 aa24.18■■□□□ 1.46
PPFIA1-202ENST00000389547 GZF1Q9H116 711 aaPredicted RBP24.18■■□□□ 1.46
PPFIA1-202ENST00000389547 ADGRL2O95490 1459 aa24.17■■□□□ 1.46
PPFIA1-202ENST00000389547 RCAN3Q9UKA8 241 aa24.17■■□□□ 1.46
PPFIA1-202ENST00000389547 SLC26A8Q96RN1 970 aa24.17■■□□□ 1.46
PPFIA1-202ENST00000389547 TXNDC2Q86VQ3 553 aa24.16■■□□□ 1.46
PPFIA1-202ENST00000389547 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
PPFIA1-202ENST00000389547 RRP7AQ9Y3A4 280 aaKnown RBP24.15■■□□□ 1.46
PPFIA1-202ENST00000389547 NGDNQ8NEJ9 315 aaKnown RBP24.14■■□□□ 1.45
PPFIA1-202ENST00000389547 GGNBP2Q9H3C7 697 aa24.13■■□□□ 1.45
PPFIA1-202ENST00000389547 LRRIQ1Q96JM4 1722 aa24.13■■□□□ 1.45
PPFIA1-202ENST00000389547 SPRYD3Q8NCJ5 442 aa24.11■■□□□ 1.45
PPFIA1-202ENST00000389547 UHRF1BP1LA0JNW5 1464 aa24.11■■□□□ 1.45
PPFIA1-202ENST00000389547 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
PPFIA1-202ENST00000389547 SAMD9LQ8IVG5 1584 aa24.1■■□□□ 1.45
PPFIA1-202ENST00000389547 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.1■■□□□ 1.45
PPFIA1-202ENST00000389547 NOS1P29475 1434 aa24.09■■□□□ 1.45
PPFIA1-202ENST00000389547 APAF1O14727 1248 aa24.06■■□□□ 1.44
PPFIA1-202ENST00000389547 ZCCHC11Q5TAX3 1644 aaKnown RBP24.06■■□□□ 1.44
PPFIA1-202ENST00000389547 WAPLQ7Z5K2 1190 aa24.06■■□□□ 1.44
PPFIA1-202ENST00000389547 ARHGEF12Q9NZN5 1544 aa24.06■■□□□ 1.44
PPFIA1-202ENST00000389547 RTEL1-TNFRSF6BF6WH68 1400 aa24.06■■□□□ 1.44
PPFIA1-202ENST00000389547 ARID3AQ99856 593 aa24.06■■□□□ 1.44
PPFIA1-202ENST00000389547 CFAP65Q6ZU64 1925 aaKnown RBP24.05■■□□□ 1.44
PPFIA1-202ENST00000389547 RPGRIP1LQ68CZ1 1315 aa24.04■■□□□ 1.44
PPFIA1-202ENST00000389547 HAP1P54257 671 aaPredicted RBP24.03■■□□□ 1.44
PPFIA1-202ENST00000389547 ADAMTS8Q9UP79 889 aa24.03■■□□□ 1.44
PPFIA1-202ENST00000389547 PLIN1O60240 522 aa24.02■■□□□ 1.44
PPFIA1-202ENST00000389547 ATP7AQ04656 1500 aa24.01■■□□□ 1.43
PPFIA1-202ENST00000389547 FRAT2O75474 233 aaPredicted RBP24.01■■□□□ 1.43
PPFIA1-202ENST00000389547 DISP3Q9P2K9 1392 aa24■■□□□ 1.43
PPFIA1-202ENST00000389547 MYO5CQ9NQX4 1742 aa24■■□□□ 1.43
PPFIA1-202ENST00000389547 PPP2R1AP30153 589 aa24■■□□□ 1.43
PPFIA1-202ENST00000389547 CABP1Q9NZU7 370 aa24■■□□□ 1.43
PPFIA1-202ENST00000389547 RRP1P56182 461 aaKnown RBP23.99■■□□□ 1.43
PPFIA1-202ENST00000389547 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
PPFIA1-202ENST00000389547 GOLGA6L3A6NEY3 463 aa23.99■■□□□ 1.43
PPFIA1-202ENST00000389547 PRAG1Q86YV5 1406 aa23.99■■□□□ 1.43
PPFIA1-202ENST00000389547 GOLGA2Q08379 1002 aa23.99■■□□□ 1.43
PPFIA1-202ENST00000389547 PNISRQ8TF01 805 aaKnown RBP23.99■■□□□ 1.43
PPFIA1-202ENST00000389547 CDC42BPAQ5VT25 1732 aa23.99■■□□□ 1.43
PPFIA1-202ENST00000389547 MTHFSP49914 203 aa23.99■■□□□ 1.43
PPFIA1-202ENST00000389547 CDK19Q9BWU1 502 aa23.99■■□□□ 1.43
PPFIA1-202ENST00000389547 MS4A1P11836 297 aa23.98■■□□□ 1.43
PPFIA1-202ENST00000389547 FAM43AQ8N2R8 423 aa23.98■■□□□ 1.43
PPFIA1-202ENST00000389547 LTV1Q96GA3 475 aaPredicted RBP23.97■■□□□ 1.43
PPFIA1-202ENST00000389547 TEX14Q8IWB6 1497 aa23.97■■□□□ 1.43
PPFIA1-202ENST00000389547 C14orf93Q9H972 538 aaKnown RBP23.95■■□□□ 1.43
PPFIA1-202ENST00000389547 ARHGEF5Q12774 1597 aa23.95■■□□□ 1.43
PPFIA1-202ENST00000389547 A0A0G2JS52 829 aa23.95■■□□□ 1.42
PPFIA1-202ENST00000389547 CLASP1Q7Z460 1538 aa23.95■■□□□ 1.42
PPFIA1-202ENST00000389547 THEMISQ8N1K5 641 aaPredicted RBP23.94■■□□□ 1.42
PPFIA1-202ENST00000389547 PMFBP1Q8TBY8 1022 aa23.94■■□□□ 1.42
PPFIA1-202ENST00000389547 CDCA7LQ96GN5 454 aa23.94■■□□□ 1.42
PPFIA1-202ENST00000389547 COG3Q96JB2 828 aa23.94■■□□□ 1.42
PPFIA1-202ENST00000389547 YEATS2Q9ULM3 1422 aa23.94■■□□□ 1.42
PPFIA1-202ENST00000389547 BACH2Q9BYV9 841 aa23.93■■□□□ 1.42
PPFIA1-202ENST00000389547 NUTM2GQ5VZR2 741 aa23.93■■□□□ 1.42
PPFIA1-202ENST00000389547 PODXL2Q9NZ53 605 aa23.93■■□□□ 1.42
PPFIA1-202ENST00000389547 PREX2Q70Z35 1606 aa23.93■■□□□ 1.42
PPFIA1-202ENST00000389547 TESK2Q96S53 571 aa23.93■■□□□ 1.42
PPFIA1-202ENST00000389547 FTSJ3Q8IY81 847 aaKnown RBP23.92■■□□□ 1.42
PPFIA1-202ENST00000389547 RBM33Q96EV2 1170 aaKnown RBP23.92■■□□□ 1.42
PPFIA1-202ENST00000389547 BRD4O60885 1362 aaPredicted RBP23.92■■□□□ 1.42
PPFIA1-202ENST00000389547 POGZQ7Z3K3 1410 aa23.92■■□□□ 1.42
PPFIA1-202ENST00000389547 RALGAPBQ86X10 1494 aa23.9■■□□□ 1.42
PPFIA1-202ENST00000389547 A0A0U1RQG5 324 aaPredicted RBP23.9■■□□□ 1.42
PPFIA1-202ENST00000389547 AMPHP49418 695 aa23.89■■□□□ 1.41
PPFIA1-202ENST00000389547 ABCC1P33527 1531 aa23.88■■□□□ 1.41
PPFIA1-202ENST00000389547 BCL2L13Q9BXK5 485 aa23.88■■□□□ 1.41
PPFIA1-202ENST00000389547 ZMYND15Q9H091 742 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms