RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 C20orf194Q5TEA3 1177 aa19.01■□□□□ 0.63
VPS9D1-201ENST00000389386 FAM69CQ0P6D2 419 aa19■□□□□ 0.63
VPS9D1-201ENST00000389386 CLCN1P35523 988 aa19■□□□□ 0.63
VPS9D1-201ENST00000389386 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
VPS9D1-201ENST00000389386 ABCC1P33527 1531 aa18.99■□□□□ 0.63
VPS9D1-201ENST00000389386 ADGRL1O94910 1474 aa18.98■□□□□ 0.63
VPS9D1-201ENST00000389386 PLEKHH2Q8IVE3 1493 aa18.98■□□□□ 0.63
VPS9D1-201ENST00000389386 SPAG9O60271 1321 aaKnown RBP18.98■□□□□ 0.63
VPS9D1-201ENST00000389386 NLRP13Q86W25 1043 aa18.97■□□□□ 0.63
VPS9D1-201ENST00000389386 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
VPS9D1-201ENST00000389386 XRCC6P12956 609 aaKnown RBP eCLIP18.94■□□□□ 0.62
VPS9D1-201ENST00000389386 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
VPS9D1-201ENST00000389386 RAPGEF3O95398 923 aa18.94■□□□□ 0.62
VPS9D1-201ENST00000389386 USP19O94966 1318 aa18.93■□□□□ 0.62
VPS9D1-201ENST00000389386 ARAP3Q8WWN8 1544 aa18.92■□□□□ 0.62
VPS9D1-201ENST00000389386 RGS3P49796 1198 aa18.91■□□□□ 0.62
VPS9D1-201ENST00000389386 PARD3Q8TEW0 1356 aa18.91■□□□□ 0.62
VPS9D1-201ENST00000389386 FSD2A1L4K1 749 aa18.91■□□□□ 0.62
VPS9D1-201ENST00000389386 INSRP06213 1382 aa18.9■□□□□ 0.62
VPS9D1-201ENST00000389386 KDM5DQ9BY66 1539 aa18.89■□□□□ 0.62
VPS9D1-201ENST00000389386 ST20-MTHFSA0A0A6YYL1 179 aa18.89■□□□□ 0.62
VPS9D1-201ENST00000389386 TSPOAP1O95153 1857 aa18.89■□□□□ 0.61
VPS9D1-201ENST00000389386 BLMP54132 1417 aaPredicted RBP18.89■□□□□ 0.61
VPS9D1-201ENST00000389386 E9PCH4 1651 aa18.88■□□□□ 0.61
VPS9D1-201ENST00000389386 GOLGA6L3A6NEY3 463 aa18.88■□□□□ 0.61
VPS9D1-201ENST00000389386 ANTXR1Q9H6X2 564 aa18.88■□□□□ 0.61
VPS9D1-201ENST00000389386 BECN1Q14457 450 aa18.87■□□□□ 0.61
VPS9D1-201ENST00000389386 CCDC144AA2RUR9 1427 aa18.87■□□□□ 0.61
VPS9D1-201ENST00000389386 SLKQ9H2G2 1235 aaPredicted RBP18.87■□□□□ 0.61
VPS9D1-201ENST00000389386 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
VPS9D1-201ENST00000389386 PANK2Q9BZ23 570 aa18.86■□□□□ 0.61
VPS9D1-201ENST00000389386 RALGAPBQ86X10 1494 aa18.86■□□□□ 0.61
VPS9D1-201ENST00000389386 ZMYM4Q5VZL5 1548 aa18.86■□□□□ 0.61
VPS9D1-201ENST00000389386 MAST1Q9Y2H9 1570 aa18.86■□□□□ 0.61
VPS9D1-201ENST00000389386 UHRF1BP1Q6BDS2 1440 aa18.86■□□□□ 0.61
VPS9D1-201ENST00000389386 PLA2R1Q13018 1463 aa18.85■□□□□ 0.61
VPS9D1-201ENST00000389386 ZFYVE16Q7Z3T8 1539 aa18.84■□□□□ 0.61
VPS9D1-201ENST00000389386 ARXQ96QS3 562 aa18.83■□□□□ 0.61
VPS9D1-201ENST00000389386 DIP2BQ9P265 1576 aa18.82■□□□□ 0.6
VPS9D1-201ENST00000389386 ATP7AQ04656 1500 aa18.82■□□□□ 0.6
VPS9D1-201ENST00000389386 VIRMAQ69YN4 1812 aaKnown RBP18.82■□□□□ 0.6
VPS9D1-201ENST00000389386 KIF3BO15066 747 aa18.82■□□□□ 0.6
VPS9D1-201ENST00000389386 SEC24BO95487 1268 aa18.81■□□□□ 0.6
VPS9D1-201ENST00000389386 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
VPS9D1-201ENST00000389386 DUOX2Q9NRD8 1548 aa18.8■□□□□ 0.6
VPS9D1-201ENST00000389386 MAP3K4Q9Y6R4 1608 aa18.8■□□□□ 0.6
VPS9D1-201ENST00000389386 PER1O15534 1290 aaPredicted RBP18.8■□□□□ 0.6
VPS9D1-201ENST00000389386 ZNF518AQ6AHZ1 1483 aa18.79■□□□□ 0.6
VPS9D1-201ENST00000389386 DUSP27Q5VZP5 1158 aa18.79■□□□□ 0.6
VPS9D1-201ENST00000389386 POGZQ7Z3K3 1410 aa18.78■□□□□ 0.6
VPS9D1-201ENST00000389386 RTEL1-TNFRSF6BF6WH68 1400 aa18.78■□□□□ 0.6
VPS9D1-201ENST00000389386 A0A0U1RQG5 324 aaPredicted RBP18.78■□□□□ 0.6
VPS9D1-201ENST00000389386 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.78■□□□□ 0.6
VPS9D1-201ENST00000389386 UNC13BO14795 1591 aa18.78■□□□□ 0.6
VPS9D1-201ENST00000389386 KIDINS220Q9ULH0 1771 aa18.76■□□□□ 0.59
VPS9D1-201ENST00000389386 ESPNB1AK53 854 aa18.76■□□□□ 0.59
VPS9D1-201ENST00000389386 MCM4P33991 863 aa18.76■□□□□ 0.59
VPS9D1-201ENST00000389386 NLRP1Q9C000 1473 aa18.76■□□□□ 0.59
VPS9D1-201ENST00000389386 INO80Q9ULG1 1556 aaPredicted RBP18.76■□□□□ 0.59
VPS9D1-201ENST00000389386 MRE11P49959 708 aa18.76■□□□□ 0.59
VPS9D1-201ENST00000389386 CENPJQ9HC77 1338 aaPredicted RBP18.76■□□□□ 0.59
VPS9D1-201ENST00000389386 NEO1Q92859 1461 aa18.75■□□□□ 0.59
VPS9D1-201ENST00000389386 GZF1Q9H116 711 aaPredicted RBP18.75■□□□□ 0.59
VPS9D1-201ENST00000389386 A2MP01023 1474 aa18.75■□□□□ 0.59
VPS9D1-201ENST00000389386 ERBINQ96RT1 1412 aa18.75■□□□□ 0.59
VPS9D1-201ENST00000389386 GLI2P10070 1586 aa18.75■□□□□ 0.59
VPS9D1-201ENST00000389386 CFAP74Q9C0B2 1584 aa18.75■□□□□ 0.59
VPS9D1-201ENST00000389386 PDCL3Q9H2J4 239 aa18.74■□□□□ 0.59
VPS9D1-201ENST00000389386 PRAG1Q86YV5 1406 aa18.74■□□□□ 0.59
VPS9D1-201ENST00000389386 ERBB4Q15303 1308 aa18.74■□□□□ 0.59
VPS9D1-201ENST00000389386 GGT6Q6P531 493 aa18.73■□□□□ 0.59
VPS9D1-201ENST00000389386 EIF3AQ14152 1382 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-201ENST00000389386 TPM2P07951 284 aa18.73■□□□□ 0.59
VPS9D1-201ENST00000389386 IQGAP3Q86VI3 1631 aa18.73■□□□□ 0.59
VPS9D1-201ENST00000389386 IGHDP01880 384 aa18.72■□□□□ 0.59
VPS9D1-201ENST00000389386 TBC1D2Q9BYX2 928 aa18.72■□□□□ 0.59
VPS9D1-201ENST00000389386 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
VPS9D1-201ENST00000389386 RBM10P98175 930 aaKnown RBP18.72■□□□□ 0.59
VPS9D1-201ENST00000389386 MYH16Q9H6N6 1097 aa18.72■□□□□ 0.59
VPS9D1-201ENST00000389386 PLEKHH1Q9ULM0 1364 aa18.71■□□□□ 0.59
VPS9D1-201ENST00000389386 KIF13AQ9H1H9 1805 aa18.71■□□□□ 0.59
VPS9D1-201ENST00000389386 ADAMTS8Q9UP79 889 aa18.71■□□□□ 0.59
VPS9D1-201ENST00000389386 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
VPS9D1-201ENST00000389386 ZNF521Q96K83 1311 aa18.7■□□□□ 0.58
VPS9D1-201ENST00000389386 TRAK2O60296 914 aa18.7■□□□□ 0.58
VPS9D1-201ENST00000389386 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
VPS9D1-201ENST00000389386 YEATS2Q9ULM3 1422 aa18.69■□□□□ 0.58
VPS9D1-201ENST00000389386 PPRC1Q5VV67 1664 aaKnown RBP18.69■□□□□ 0.58
VPS9D1-201ENST00000389386 GRPEL1Q9HAV7 217 aa18.69■□□□□ 0.58
VPS9D1-201ENST00000389386 FGD1P98174 961 aa18.68■□□□□ 0.58
VPS9D1-201ENST00000389386 CALD1Q05682 793 aaKnown RBP18.68■□□□□ 0.58
VPS9D1-201ENST00000389386 AAMPQ13685 434 aa18.68■□□□□ 0.58
VPS9D1-201ENST00000389386 TBC1D32Q96NH3 1257 aa18.68■□□□□ 0.58
VPS9D1-201ENST00000389386 GOLGA2Q08379 1002 aa18.67■□□□□ 0.58
VPS9D1-201ENST00000389386 HECW2Q9P2P5 1572 aa18.67■□□□□ 0.58
VPS9D1-201ENST00000389386 TRPM1Q7Z4N2 1603 aa18.67■□□□□ 0.58
VPS9D1-201ENST00000389386 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
VPS9D1-201ENST00000389386 MAGI2Q86UL8 1455 aa18.66■□□□□ 0.58
VPS9D1-201ENST00000389386 PRDM4Q9UKN5 801 aa18.65■□□□□ 0.58
VPS9D1-201ENST00000389386 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms