RNA–Protein interactions for RNA: ENST00000381810.7

LITAF-202, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-202ENST00000381810 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
LITAF-202ENST00000381810 CHGAP10645 457 aaKnown RBP23.39■■□□□ 1.34
LITAF-202ENST00000381810 CLTCQ00610 1675 aaKnown RBP23.39■■□□□ 1.33
LITAF-202ENST00000381810 SCAF11Q99590 1463 aaKnown RBP23.39■■□□□ 1.33
LITAF-202ENST00000381810 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
LITAF-202ENST00000381810 ADGRF5Q8IZF2 1346 aa23.37■■□□□ 1.33
LITAF-202ENST00000381810 TESK2Q96S53 571 aa23.37■■□□□ 1.33
LITAF-202ENST00000381810 PRKRIP1Q9H875 184 aaPredicted RBP23.35■■□□□ 1.33
LITAF-202ENST00000381810 SLC52A1Q9NWF4 448 aa23.34■■□□□ 1.33
LITAF-202ENST00000381810 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.33
LITAF-202ENST00000381810 SETBP1Q9Y6X0 1596 aa23.33■■□□□ 1.33
LITAF-202ENST00000381810 ERVK-7P63135 1459 aa23.32■■□□□ 1.32
LITAF-202ENST00000381810 NEXMIFQ5QGS0 1516 aa23.32■■□□□ 1.32
LITAF-202ENST00000381810 SCAF1Q9H7N4 1312 aaKnown RBP23.31■■□□□ 1.32
LITAF-202ENST00000381810 EIF3AQ14152 1382 aaKnown RBP23.31■■□□□ 1.32
LITAF-202ENST00000381810 DISP3Q9P2K9 1392 aa23.31■■□□□ 1.32
LITAF-202ENST00000381810 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
LITAF-202ENST00000381810 TMEM131LA2VDJ0 1609 aa23.31■■□□□ 1.32
LITAF-202ENST00000381810 PIK3C2GO75747 1445 aa23.3■■□□□ 1.32
LITAF-202ENST00000381810 TMF1P82094 1093 aa23.3■■□□□ 1.32
LITAF-202ENST00000381810 IDI1Q13907 227 aa23.29■■□□□ 1.32
LITAF-202ENST00000381810 SPATA31D1Q6ZQQ2 1576 aa23.26■■□□□ 1.31
LITAF-202ENST00000381810 MYO3AQ8NEV4 1616 aa23.25■■□□□ 1.31
LITAF-202ENST00000381810 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
LITAF-202ENST00000381810 MLECQ14165 292 aa23.23■■□□□ 1.31
LITAF-202ENST00000381810 FBXO31Q5XUX0 539 aaPredicted RBP23.23■■□□□ 1.31
LITAF-202ENST00000381810 ZFYVE9O95405 1425 aa23.23■■□□□ 1.31
LITAF-202ENST00000381810 ADGRB1O14514 1584 aa23.22■■□□□ 1.31
LITAF-202ENST00000381810 VGFO15240 615 aaPredicted RBP23.22■■□□□ 1.31
LITAF-202ENST00000381810 CDCA8Q53HL2 280 aa23.19■■□□□ 1.3
LITAF-202ENST00000381810 KDM5AP29375 1690 aaKnown RBP23.19■■□□□ 1.3
LITAF-202ENST00000381810 GTF3C3Q9Y5Q9 886 aa23.18■■□□□ 1.3
LITAF-202ENST00000381810 KTN1Q86UP2 1357 aaKnown RBP23.18■■□□□ 1.3
LITAF-202ENST00000381810 SLC24A1O60721 1099 aa23.18■■□□□ 1.3
LITAF-202ENST00000381810 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
LITAF-202ENST00000381810 ESF1Q9H501 851 aaKnown RBP23.16■■□□□ 1.3
LITAF-202ENST00000381810 MRS2Q9HD23 443 aa23.16■■□□□ 1.3
LITAF-202ENST00000381810 ZMYM3Q14202 1370 aa23.14■■□□□ 1.3
LITAF-202ENST00000381810 MYOM1P52179 1685 aa23.14■■□□□ 1.29
LITAF-202ENST00000381810 QRICH2Q9H0J4 1663 aa23.14■■□□□ 1.29
LITAF-202ENST00000381810 SBNO2Q9Y2G9 1366 aa23.13■■□□□ 1.29
LITAF-202ENST00000381810 RALBP1Q15311 655 aa23.13■■□□□ 1.29
LITAF-202ENST00000381810 NUTM2DQ5VT03 806 aaPredicted RBP23.13■■□□□ 1.29
LITAF-202ENST00000381810 PER1O15534 1290 aaPredicted RBP23.12■■□□□ 1.29
LITAF-202ENST00000381810 TRHP20396 242 aaPredicted RBP23.12■■□□□ 1.29
LITAF-202ENST00000381810 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
LITAF-202ENST00000381810 PANK3Q9H999 370 aa23.11■■□□□ 1.29
LITAF-202ENST00000381810 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
LITAF-202ENST00000381810 A2ML1A8K2U0 1454 aa23.1■■□□□ 1.29
LITAF-202ENST00000381810 CNGB1Q14028 1251 aaPredicted RBP23.1■■□□□ 1.29
LITAF-202ENST00000381810 STAG3Q9UJ98 1225 aa23.1■■□□□ 1.29
LITAF-202ENST00000381810 TMEM132EQ6IEE7 984 aa23.08■■□□□ 1.29
LITAF-202ENST00000381810 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.28
LITAF-202ENST00000381810 PARD3Q8TEW0 1356 aa23.07■■□□□ 1.28
LITAF-202ENST00000381810 ASXL1Q8IXJ9 1541 aa23.07■■□□□ 1.28
LITAF-202ENST00000381810 MYBBP1AQ9BQG0 1328 aaKnown RBP23.07■■□□□ 1.28
LITAF-202ENST00000381810 HNRNPUQ00839 825 aaKnown RBP eCLIP23.03■■□□□ 1.28
LITAF-202ENST00000381810 FAM9BQ8IZU0 186 aa23.03■■□□□ 1.28
LITAF-202ENST00000381810 TNRQ92752 1358 aa23.03■■□□□ 1.28
LITAF-202ENST00000381810 RIMS2Q9UQ26 1411 aa23.03■■□□□ 1.28
LITAF-202ENST00000381810 BRD4O60885 1362 aaPredicted RBP23.03■■□□□ 1.28
LITAF-202ENST00000381810 ALKQ9UM73 1620 aa23.03■■□□□ 1.28
LITAF-202ENST00000381810 FER1L4A9Z1Z3 1794 aa23.01■■□□□ 1.27
LITAF-202ENST00000381810 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
LITAF-202ENST00000381810 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
LITAF-202ENST00000381810 TMC1Q8TDI8 760 aa22.98■■□□□ 1.27
LITAF-202ENST00000381810 C3P01024 1663 aa22.97■■□□□ 1.27
LITAF-202ENST00000381810 CC2D1BQ5T0F9 858 aaKnown RBP22.97■■□□□ 1.27
LITAF-202ENST00000381810 KNSTRNQ9Y448 316 aa22.97■■□□□ 1.27
LITAF-202ENST00000381810 NLRP13Q86W25 1043 aa22.96■■□□□ 1.27
LITAF-202ENST00000381810 YTHDC2Q9H6S0 1430 aaKnown RBP22.96■■□□□ 1.27
LITAF-202ENST00000381810 PNISRQ8TF01 805 aaKnown RBP22.95■■□□□ 1.26
LITAF-202ENST00000381810 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.94■■□□□ 1.26
LITAF-202ENST00000381810 PTPRMP28827 1452 aa22.94■■□□□ 1.26
LITAF-202ENST00000381810 NRXN3Q9Y4C0 1643 aa22.93■■□□□ 1.26
LITAF-202ENST00000381810 NPC1L1Q9UHC9 1359 aa22.93■■□□□ 1.26
LITAF-202ENST00000381810 TULP4Q9NRJ4 1543 aa22.93■■□□□ 1.26
LITAF-202ENST00000381810 AMER1Q5JTC6 1135 aaPredicted RBP22.92■■□□□ 1.26
LITAF-202ENST00000381810 PUS7Q96PZ0 661 aaKnown RBP22.92■■□□□ 1.26
LITAF-202ENST00000381810 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
LITAF-202ENST00000381810 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
LITAF-202ENST00000381810 STK26Q9P289 416 aa22.92■■□□□ 1.26
LITAF-202ENST00000381810 EVC2Q86UK5 1308 aa22.91■■□□□ 1.26
LITAF-202ENST00000381810 HDGFP51858 240 aaKnown RBP22.9■■□□□ 1.26
LITAF-202ENST00000381810 LRPPRCP42704 1394 aaKnown RBP22.89■■□□□ 1.26
LITAF-202ENST00000381810 DLC1Q96QB1 1528 aa22.89■■□□□ 1.26
LITAF-202ENST00000381810 ZBED9Q6R2W3 1325 aa22.89■■□□□ 1.25
LITAF-202ENST00000381810 TMEM2Q9UHN6 1383 aa22.87■■□□□ 1.25
LITAF-202ENST00000381810 CEBPAP49715 358 aaPredicted RBP22.85■■□□□ 1.25
LITAF-202ENST00000381810 PRAM1Q96QH2 718 aa22.84■■□□□ 1.25
LITAF-202ENST00000381810 CARD14Q9BXL6 1004 aa22.84■■□□□ 1.25
LITAF-202ENST00000381810 USP32Q8NFA0 1604 aa22.84■■□□□ 1.25
LITAF-202ENST00000381810 KNDC1Q76NI1 1749 aa22.83■■□□□ 1.25
LITAF-202ENST00000381810 POGKQ9P215 609 aa22.83■■□□□ 1.25
LITAF-202ENST00000381810 SAFB2Q14151 953 aaKnown RBP eCLIP22.82■■□□□ 1.24
LITAF-202ENST00000381810 ABCC11Q96J66 1382 aa22.81■■□□□ 1.24
LITAF-202ENST00000381810 PPP2R1AP30153 589 aa22.81■■□□□ 1.24
LITAF-202ENST00000381810 SLC12A5Q9H2X9 1139 aa22.81■■□□□ 1.24
LITAF-202ENST00000381810 NSD3Q9BZ95 1437 aa22.79■■□□□ 1.24
LITAF-202ENST00000381810 NINLQ9Y2I6 1382 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms