RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 CHGAP10645 457 aaKnown RBP23.74■■□□□ 1.39
RPAIN-203ENST00000381209 MROH2AA6NES4 1674 aa23.73■■□□□ 1.39
RPAIN-203ENST00000381209 EIF3AQ14152 1382 aaKnown RBP23.73■■□□□ 1.39
RPAIN-203ENST00000381209 PIK3C2BO00750 1634 aa23.73■■□□□ 1.39
RPAIN-203ENST00000381209 IFT172Q9UG01 1749 aa23.72■■□□□ 1.39
RPAIN-203ENST00000381209 SYNMO15061 1565 aa23.72■■□□□ 1.39
RPAIN-203ENST00000381209 IQGAP1P46940 1657 aa23.72■■□□□ 1.39
RPAIN-203ENST00000381209 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
RPAIN-203ENST00000381209 ARHGEF40Q8TER5 1519 aa23.7■■□□□ 1.39
RPAIN-203ENST00000381209 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
RPAIN-203ENST00000381209 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.38
RPAIN-203ENST00000381209 SIGLEC1Q9BZZ2 1709 aa23.7■■□□□ 1.38
RPAIN-203ENST00000381209 KTN1Q86UP2 1357 aaKnown RBP23.68■■□□□ 1.38
RPAIN-203ENST00000381209 PIK3C2GO75747 1445 aa23.68■■□□□ 1.38
RPAIN-203ENST00000381209 IDI1Q13907 227 aa23.67■■□□□ 1.38
RPAIN-203ENST00000381209 CDCA8Q53HL2 280 aa23.67■■□□□ 1.38
RPAIN-203ENST00000381209 C14orf93Q9H972 538 aaKnown RBP23.66■■□□□ 1.38
RPAIN-203ENST00000381209 SETBP1Q9Y6X0 1596 aa23.65■■□□□ 1.38
RPAIN-203ENST00000381209 VGFO15240 615 aaPredicted RBP23.64■■□□□ 1.38
RPAIN-203ENST00000381209 MRS2Q9HD23 443 aa23.64■■□□□ 1.37
RPAIN-203ENST00000381209 CCDC184Q52MB2 194 aa23.63■■□□□ 1.37
RPAIN-203ENST00000381209 ERVK-7P63135 1459 aa23.63■■□□□ 1.37
RPAIN-203ENST00000381209 ZFYVE9O95405 1425 aa23.62■■□□□ 1.37
RPAIN-203ENST00000381209 PPLO60437 1756 aa23.62■■□□□ 1.37
RPAIN-203ENST00000381209 RALBP1Q15311 655 aa23.62■■□□□ 1.37
RPAIN-203ENST00000381209 PREX1Q8TCU6 1659 aa23.61■■□□□ 1.37
RPAIN-203ENST00000381209 PER1O15534 1290 aaPredicted RBP23.6■■□□□ 1.37
RPAIN-203ENST00000381209 NEXMIFQ5QGS0 1516 aa23.6■■□□□ 1.37
RPAIN-203ENST00000381209 SBNO2Q9Y2G9 1366 aa23.58■■□□□ 1.36
RPAIN-203ENST00000381209 FBXO31Q5XUX0 539 aaPredicted RBP23.57■■□□□ 1.36
RPAIN-203ENST00000381209 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
RPAIN-203ENST00000381209 PANK3Q9H999 370 aa23.54■■□□□ 1.36
RPAIN-203ENST00000381209 CFAP65Q6ZU64 1925 aaKnown RBP23.54■■□□□ 1.36
RPAIN-203ENST00000381209 MYBBP1AQ9BQG0 1328 aaKnown RBP23.54■■□□□ 1.36
RPAIN-203ENST00000381209 SPATA31D1Q6ZQQ2 1576 aa23.54■■□□□ 1.36
RPAIN-203ENST00000381209 TMEM131LA2VDJ0 1609 aa23.54■■□□□ 1.36
RPAIN-203ENST00000381209 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.36
RPAIN-203ENST00000381209 HNRNPUQ00839 825 aaKnown RBP eCLIP23.52■■□□□ 1.36
RPAIN-203ENST00000381209 MLECQ14165 292 aa23.52■■□□□ 1.36
RPAIN-203ENST00000381209 MYO3AQ8NEV4 1616 aa23.52■■□□□ 1.36
RPAIN-203ENST00000381209 CENPJQ9HC77 1338 aaPredicted RBP23.51■■□□□ 1.35
RPAIN-203ENST00000381209 BRD4O60885 1362 aaPredicted RBP23.51■■□□□ 1.35
RPAIN-203ENST00000381209 CLTCQ00610 1675 aaKnown RBP23.5■■□□□ 1.35
RPAIN-203ENST00000381209 ESF1Q9H501 851 aaKnown RBP23.5■■□□□ 1.35
RPAIN-203ENST00000381209 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
RPAIN-203ENST00000381209 ZMYM3Q14202 1370 aa23.47■■□□□ 1.35
RPAIN-203ENST00000381209 CNGB1Q14028 1251 aaPredicted RBP23.47■■□□□ 1.35
RPAIN-203ENST00000381209 TMC1Q8TDI8 760 aa23.46■■□□□ 1.35
RPAIN-203ENST00000381209 TRAK1Q9UPV9 953 aa23.46■■□□□ 1.35
RPAIN-203ENST00000381209 TMEM132EQ6IEE7 984 aa23.45■■□□□ 1.34
RPAIN-203ENST00000381209 STAG3Q9UJ98 1225 aa23.45■■□□□ 1.34
RPAIN-203ENST00000381209 NUTM2DQ5VT03 806 aaPredicted RBP23.44■■□□□ 1.34
RPAIN-203ENST00000381209 NLRP13Q86W25 1043 aa23.44■■□□□ 1.34
RPAIN-203ENST00000381209 PNISRQ8TF01 805 aaKnown RBP23.43■■□□□ 1.34
RPAIN-203ENST00000381209 A2ML1A8K2U0 1454 aa23.43■■□□□ 1.34
RPAIN-203ENST00000381209 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
RPAIN-203ENST00000381209 PUS7Q96PZ0 661 aaKnown RBP23.41■■□□□ 1.34
RPAIN-203ENST00000381209 KDM5AP29375 1690 aaKnown RBP23.41■■□□□ 1.34
RPAIN-203ENST00000381209 NPC1L1Q9UHC9 1359 aa23.41■■□□□ 1.34
RPAIN-203ENST00000381209 ZBED9Q6R2W3 1325 aa23.4■■□□□ 1.34
RPAIN-203ENST00000381209 AMER1Q5JTC6 1135 aaPredicted RBP23.38■■□□□ 1.33
RPAIN-203ENST00000381209 CC2D1BQ5T0F9 858 aaKnown RBP23.38■■□□□ 1.33
RPAIN-203ENST00000381209 LRPPRCP42704 1394 aaKnown RBP23.37■■□□□ 1.33
RPAIN-203ENST00000381209 RIMS2Q9UQ26 1411 aa23.36■■□□□ 1.33
RPAIN-203ENST00000381209 TNRQ92752 1358 aa23.36■■□□□ 1.33
RPAIN-203ENST00000381209 ASXL1Q8IXJ9 1541 aa23.35■■□□□ 1.33
RPAIN-203ENST00000381209 TRHP20396 242 aaPredicted RBP23.35■■□□□ 1.33
RPAIN-203ENST00000381209 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
RPAIN-203ENST00000381209 MYOM1P52179 1685 aa23.34■■□□□ 1.33
RPAIN-203ENST00000381209 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.33
RPAIN-203ENST00000381209 QRICH2Q9H0J4 1663 aa23.32■■□□□ 1.32
RPAIN-203ENST00000381209 EVC2Q86UK5 1308 aa23.31■■□□□ 1.32
RPAIN-203ENST00000381209 ALKQ9UM73 1620 aa23.31■■□□□ 1.32
RPAIN-203ENST00000381209 HDGFP51858 240 aaKnown RBP23.31■■□□□ 1.32
RPAIN-203ENST00000381209 YTHDC2Q9H6S0 1430 aaKnown RBP23.31■■□□□ 1.32
RPAIN-203ENST00000381209 INSRP06213 1382 aa23.3■■□□□ 1.32
RPAIN-203ENST00000381209 ARHGEF28Q8N1W1 1705 aaKnown RBP23.29■■□□□ 1.32
RPAIN-203ENST00000381209 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
RPAIN-203ENST00000381209 PTPRMP28827 1452 aa23.26■■□□□ 1.31
RPAIN-203ENST00000381209 CARD14Q9BXL6 1004 aa23.26■■□□□ 1.31
RPAIN-203ENST00000381209 STK26Q9P289 416 aa23.26■■□□□ 1.31
RPAIN-203ENST00000381209 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
RPAIN-203ENST00000381209 TULP4Q9NRJ4 1543 aa23.24■■□□□ 1.31
RPAIN-203ENST00000381209 NLRP1Q9C000 1473 aa23.23■■□□□ 1.31
RPAIN-203ENST00000381209 DLC1Q96QB1 1528 aa23.23■■□□□ 1.31
RPAIN-203ENST00000381209 NINLQ9Y2I6 1382 aa23.22■■□□□ 1.31
RPAIN-203ENST00000381209 NEFLP07196 543 aa23.22■■□□□ 1.31
RPAIN-203ENST00000381209 TMEM2Q9UHN6 1383 aa23.21■■□□□ 1.31
RPAIN-203ENST00000381209 PRAM1Q96QH2 718 aa23.21■■□□□ 1.31
RPAIN-203ENST00000381209 SLC12A5Q9H2X9 1139 aa23.21■■□□□ 1.31
RPAIN-203ENST00000381209 POGKQ9P215 609 aa23.21■■□□□ 1.31
RPAIN-203ENST00000381209 ABCC11Q96J66 1382 aa23.2■■□□□ 1.31
RPAIN-203ENST00000381209 ATAD2Q6PL18 1390 aa23.17■■□□□ 1.3
RPAIN-203ENST00000381209 ANKRD36BQ8N2N9 1353 aa23.17■■□□□ 1.3
RPAIN-203ENST00000381209 NSD3Q9BZ95 1437 aa23.17■■□□□ 1.3
RPAIN-203ENST00000381209 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
RPAIN-203ENST00000381209 SAFB2Q14151 953 aaKnown RBP eCLIP23.16■■□□□ 1.3
RPAIN-203ENST00000381209 SIRT1Q96EB6 747 aa23.16■■□□□ 1.3
RPAIN-203ENST00000381209 CABP2Q9NPB3 220 aa23.16■■□□□ 1.3
RPAIN-203ENST00000381209 SMG6Q86US8 1419 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms