RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 NRXN1Q9ULB1 1477 aa18.1■□□□□ 0.49
LCMT1-201ENST00000380962 PER1O15534 1290 aaPredicted RBP18.1■□□□□ 0.49
LCMT1-201ENST00000380962 IFT172Q9UG01 1749 aa18.1■□□□□ 0.49
LCMT1-201ENST00000380962 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
LCMT1-201ENST00000380962 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
LCMT1-201ENST00000380962 NLRP13Q86W25 1043 aa18.08■□□□□ 0.49
LCMT1-201ENST00000380962 ADGRB3O60242 1522 aa18.08■□□□□ 0.49
LCMT1-201ENST00000380962 ABCA6Q8N139 1617 aa18.08■□□□□ 0.48
LCMT1-201ENST00000380962 SYNMO15061 1565 aa18.06■□□□□ 0.48
LCMT1-201ENST00000380962 ABCC3O15438 1527 aa18.06■□□□□ 0.48
LCMT1-201ENST00000380962 SETBP1Q9Y6X0 1596 aa18.04■□□□□ 0.48
LCMT1-201ENST00000380962 ZC3H13Q5T200 1668 aaKnown RBP18.04■□□□□ 0.48
LCMT1-201ENST00000380962 NPATQ14207 1427 aa18.04■□□□□ 0.48
LCMT1-201ENST00000380962 DIP2CQ9Y2E4 1556 aa18.03■□□□□ 0.48
LCMT1-201ENST00000380962 RPGRIP1LQ68CZ1 1315 aa18.03■□□□□ 0.48
LCMT1-201ENST00000380962 ARHGAP31Q2M1Z3 1444 aa18.03■□□□□ 0.48
LCMT1-201ENST00000380962 RICTORQ6R327 1708 aa18.03■□□□□ 0.48
LCMT1-201ENST00000380962 MYO3AQ8NEV4 1616 aa18.02■□□□□ 0.48
LCMT1-201ENST00000380962 NPC1L1Q9UHC9 1359 aa18.02■□□□□ 0.47
LCMT1-201ENST00000380962 SBNO2Q9Y2G9 1366 aa18.02■□□□□ 0.47
LCMT1-201ENST00000380962 MROH2AA6NES4 1674 aa18.01■□□□□ 0.47
LCMT1-201ENST00000380962 UGGT1Q9NYU2 1555 aa18.01■□□□□ 0.47
LCMT1-201ENST00000380962 NOS1P29475 1434 aa18.01■□□□□ 0.47
LCMT1-201ENST00000380962 PANK3Q9H999 370 aa18■□□□□ 0.47
LCMT1-201ENST00000380962 NUDCQ9Y266 331 aa18■□□□□ 0.47
LCMT1-201ENST00000380962 CAMSAP1Q5T5Y3 1602 aa18■□□□□ 0.47
LCMT1-201ENST00000380962 BCANQ96GW7 911 aa17.98■□□□□ 0.47
LCMT1-201ENST00000380962 PIK3C2BO00750 1634 aa17.97■□□□□ 0.47
LCMT1-201ENST00000380962 KDM5AP29375 1690 aaKnown RBP17.97■□□□□ 0.47
LCMT1-201ENST00000380962 PPLO60437 1756 aa17.97■□□□□ 0.47
LCMT1-201ENST00000380962 RNF123Q5XPI4 1314 aa17.96■□□□□ 0.47
LCMT1-201ENST00000380962 TSHZ2Q9NRE2 1034 aa17.96■□□□□ 0.47
LCMT1-201ENST00000380962 PIK3C2GO75747 1445 aa17.95■□□□□ 0.46
LCMT1-201ENST00000380962 ADGRF5Q8IZF2 1346 aa17.95■□□□□ 0.46
LCMT1-201ENST00000380962 PDE3BQ13370 1112 aa17.94■□□□□ 0.46
LCMT1-201ENST00000380962 PPP4R2Q9NY27 417 aa17.94■□□□□ 0.46
LCMT1-201ENST00000380962 MYOM1P52179 1685 aa17.94■□□□□ 0.46
LCMT1-201ENST00000380962 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
LCMT1-201ENST00000380962 BLMP54132 1417 aaPredicted RBP17.93■□□□□ 0.46
LCMT1-201ENST00000380962 GGT6Q6P531 493 aa17.93■□□□□ 0.46
LCMT1-201ENST00000380962 KNSTRNQ9Y448 316 aa17.93■□□□□ 0.46
LCMT1-201ENST00000380962 REREQ9P2R6 1566 aa17.92■□□□□ 0.46
LCMT1-201ENST00000380962 CFAP70Q5T0N1 1121 aa17.92■□□□□ 0.46
LCMT1-201ENST00000380962 ERVK-7P63135 1459 aa17.92■□□□□ 0.46
LCMT1-201ENST00000380962 RAPGEF3O95398 923 aa17.91■□□□□ 0.46
LCMT1-201ENST00000380962 DIP2BQ9P265 1576 aa17.9■□□□□ 0.46
LCMT1-201ENST00000380962 CNGB1Q14028 1251 aaPredicted RBP17.9■□□□□ 0.46
LCMT1-201ENST00000380962 C14orf93Q9H972 538 aaKnown RBP17.9■□□□□ 0.46
LCMT1-201ENST00000380962 ADGRB1O14514 1584 aa17.9■□□□□ 0.46
LCMT1-201ENST00000380962 ZFYVE9O95405 1425 aa17.89■□□□□ 0.46
LCMT1-201ENST00000380962 AMER1Q5JTC6 1135 aaPredicted RBP17.89■□□□□ 0.45
LCMT1-201ENST00000380962 SIGLEC1Q9BZZ2 1709 aa17.88■□□□□ 0.45
LCMT1-201ENST00000380962 MYT1Q01538 1121 aa17.88■□□□□ 0.45
LCMT1-201ENST00000380962 CC2D1BQ5T0F9 858 aaKnown RBP17.88■□□□□ 0.45
LCMT1-201ENST00000380962 SLC52A1Q9NWF4 448 aa17.88■□□□□ 0.45
LCMT1-201ENST00000380962 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
LCMT1-201ENST00000380962 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
LCMT1-201ENST00000380962 AGLP35573 1532 aa17.86■□□□□ 0.45
LCMT1-201ENST00000380962 NEXMIFQ5QGS0 1516 aa17.86■□□□□ 0.45
LCMT1-201ENST00000380962 YEATS2Q9ULM3 1422 aa17.86■□□□□ 0.45
LCMT1-201ENST00000380962 CENPJQ9HC77 1338 aaPredicted RBP17.85■□□□□ 0.45
LCMT1-201ENST00000380962 VGFO15240 615 aaPredicted RBP17.85■□□□□ 0.45
LCMT1-201ENST00000380962 PPP2R1AP30153 589 aa17.82■□□□□ 0.44
LCMT1-201ENST00000380962 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
LCMT1-201ENST00000380962 PREX1Q8TCU6 1659 aa17.81■□□□□ 0.44
LCMT1-201ENST00000380962 QRICH2Q9H0J4 1663 aa17.81■□□□□ 0.44
LCMT1-201ENST00000380962 IRX6P78412 446 aaPredicted RBP17.8■□□□□ 0.44
LCMT1-201ENST00000380962 KIF13AQ9H1H9 1805 aa17.8■□□□□ 0.44
LCMT1-201ENST00000380962 USP32Q8NFA0 1604 aa17.78■□□□□ 0.44
LCMT1-201ENST00000380962 FAM69CQ0P6D2 419 aa17.78■□□□□ 0.44
LCMT1-201ENST00000380962 CFAP65Q6ZU64 1925 aaKnown RBP17.78■□□□□ 0.44
LCMT1-201ENST00000380962 TMEM131LA2VDJ0 1609 aa17.77■□□□□ 0.44
LCMT1-201ENST00000380962 IDI1Q13907 227 aa17.75■□□□□ 0.43
LCMT1-201ENST00000380962 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
LCMT1-201ENST00000380962 NGEFQ8N5V2 710 aa17.75■□□□□ 0.43
LCMT1-201ENST00000380962 ARHGEF28Q8N1W1 1705 aaKnown RBP17.75■□□□□ 0.43
LCMT1-201ENST00000380962 NINLQ9Y2I6 1382 aa17.73■□□□□ 0.43
LCMT1-201ENST00000380962 RCAN3Q9UKA8 241 aa17.72■□□□□ 0.43
LCMT1-201ENST00000380962 TRAK1Q9UPV9 953 aa17.72■□□□□ 0.43
LCMT1-201ENST00000380962 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
LCMT1-201ENST00000380962 RRP1P56182 461 aaKnown RBP17.71■□□□□ 0.43
LCMT1-201ENST00000380962 CARD14Q9BXL6 1004 aa17.71■□□□□ 0.43
LCMT1-201ENST00000380962 ADAMTS8Q9UP79 889 aa17.71■□□□□ 0.43
LCMT1-201ENST00000380962 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
LCMT1-201ENST00000380962 NSD2O96028 1365 aa17.71■□□□□ 0.43
LCMT1-201ENST00000380962 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
LCMT1-201ENST00000380962 ARHGEF40Q8TER5 1519 aa17.69■□□□□ 0.42
LCMT1-201ENST00000380962 TULP4Q9NRJ4 1543 aa17.68■□□□□ 0.42
LCMT1-201ENST00000380962 NSD3Q9BZ95 1437 aa17.68■□□□□ 0.42
LCMT1-201ENST00000380962 ZNF521Q96K83 1311 aa17.68■□□□□ 0.42
LCMT1-201ENST00000380962 RBM19Q9Y4C8 960 aaKnown RBP17.67■□□□□ 0.42
LCMT1-201ENST00000380962 ANKRD36BQ8N2N9 1353 aa17.67■□□□□ 0.42
LCMT1-201ENST00000380962 TMEM132EQ6IEE7 984 aa17.66■□□□□ 0.42
LCMT1-201ENST00000380962 B4GALNT3Q6L9W6 998 aa17.66■□□□□ 0.42
LCMT1-201ENST00000380962 MYO5BQ9ULV0 1848 aa17.65■□□□□ 0.42
LCMT1-201ENST00000380962 TSPOAP1O95153 1857 aa17.65■□□□□ 0.42
LCMT1-201ENST00000380962 CGNL1Q0VF96 1302 aa17.64■□□□□ 0.41
LCMT1-201ENST00000380962 CLTCQ00610 1675 aaKnown RBP17.64■□□□□ 0.41
LCMT1-201ENST00000380962 PTPRMP28827 1452 aa17.63■□□□□ 0.41
LCMT1-201ENST00000380962 KDM4FA0A1W2PPD8 638 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 375.9 ms