RNA–Protein interactions for RNA: ENST00000380665.3

CDCA2-202, Transcript of cell division cycle associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCA2, Length 3,565 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-202ENST00000380665 MAPK8IP3Q9UPT6 1336 aa16.81■□□□□ 0.28
CDCA2-202ENST00000380665 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
CDCA2-202ENST00000380665 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
CDCA2-202ENST00000380665 GCC2Q8IWJ2 1684 aa16.8■□□□□ 0.28
CDCA2-202ENST00000380665 NUP160Q12769 1436 aa16.79■□□□□ 0.28
CDCA2-202ENST00000380665 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
CDCA2-202ENST00000380665 TSR2Q969E8 191 aaKnown RBP16.78■□□□□ 0.28
CDCA2-202ENST00000380665 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
CDCA2-202ENST00000380665 APBB1O00213 710 aa16.77■□□□□ 0.28
CDCA2-202ENST00000380665 TCP11L2Q8N4U5 519 aa16.77■□□□□ 0.28
CDCA2-202ENST00000380665 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
CDCA2-202ENST00000380665 C14orf37Q86TY3 774 aa16.77■□□□□ 0.27
CDCA2-202ENST00000380665 RALGAPBQ86X10 1494 aa16.76■□□□□ 0.27
CDCA2-202ENST00000380665 EIF3AQ14152 1382 aaKnown RBP16.75■□□□□ 0.27
CDCA2-202ENST00000380665 TNNQ9UQP3 1299 aa16.75■□□□□ 0.27
CDCA2-202ENST00000380665 ITPRIPQ8IWB1 547 aa16.74■□□□□ 0.27
CDCA2-202ENST00000380665 HMOX1P09601 288 aa16.74■□□□□ 0.27
CDCA2-202ENST00000380665 ERCC6L2Q5T890 1561 aa16.74■□□□□ 0.27
CDCA2-202ENST00000380665 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
CDCA2-202ENST00000380665 SMC4Q9NTJ3 1288 aa16.74■□□□□ 0.27
CDCA2-202ENST00000380665 A2MP01023 1474 aa16.74■□□□□ 0.27
CDCA2-202ENST00000380665 CARD14Q9BXL6 1004 aa16.73■□□□□ 0.27
CDCA2-202ENST00000380665 MBD5Q9P267 1494 aa16.72■□□□□ 0.27
CDCA2-202ENST00000380665 BCORL1Q5H9F3 1711 aa16.72■□□□□ 0.27
CDCA2-202ENST00000380665 CFAP65Q6ZU64 1925 aaKnown RBP16.72■□□□□ 0.27
CDCA2-202ENST00000380665 FBXO31Q5XUX0 539 aaPredicted RBP16.72■□□□□ 0.27
CDCA2-202ENST00000380665 UPF2Q9HAU5 1272 aaKnown RBP16.72■□□□□ 0.27
CDCA2-202ENST00000380665 DUSP27Q5VZP5 1158 aa16.71■□□□□ 0.27
CDCA2-202ENST00000380665 ABCC10Q5T3U5 1492 aa16.71■□□□□ 0.27
CDCA2-202ENST00000380665 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
CDCA2-202ENST00000380665 ITSN2Q9NZM3 1697 aa16.7■□□□□ 0.26
CDCA2-202ENST00000380665 PRAM1Q96QH2 718 aa16.69■□□□□ 0.26
CDCA2-202ENST00000380665 BACH2Q9BYV9 841 aa16.69■□□□□ 0.26
CDCA2-202ENST00000380665 E9PSI1 815 aa16.69■□□□□ 0.26
CDCA2-202ENST00000380665 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
CDCA2-202ENST00000380665 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
CDCA2-202ENST00000380665 THUMPD2Q9BTF0 503 aaKnown RBP16.67■□□□□ 0.26
CDCA2-202ENST00000380665 ADGRL2O95490 1459 aa16.67■□□□□ 0.26
CDCA2-202ENST00000380665 HSP90AA1P07900 732 aaKnown RBP16.67■□□□□ 0.26
CDCA2-202ENST00000380665 DDRGK1Q96HY6 314 aa16.67■□□□□ 0.26
CDCA2-202ENST00000380665 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
CDCA2-202ENST00000380665 PLA2R1Q13018 1463 aa16.66■□□□□ 0.26
CDCA2-202ENST00000380665 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
CDCA2-202ENST00000380665 SLFN5Q08AF3 891 aa16.66■□□□□ 0.26
CDCA2-202ENST00000380665 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
CDCA2-202ENST00000380665 WAPLQ7Z5K2 1190 aa16.66■□□□□ 0.26
CDCA2-202ENST00000380665 VGFO15240 615 aaPredicted RBP16.66■□□□□ 0.26
CDCA2-202ENST00000380665 IDI1Q13907 227 aa16.65■□□□□ 0.26
CDCA2-202ENST00000380665 NOS1P29475 1434 aa16.65■□□□□ 0.26
CDCA2-202ENST00000380665 NSD3Q9BZ95 1437 aa16.65■□□□□ 0.26
CDCA2-202ENST00000380665 WWC1Q8IX03 1113 aa16.64■□□□□ 0.26
CDCA2-202ENST00000380665 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.26
CDCA2-202ENST00000380665 EVC2Q86UK5 1308 aa16.64■□□□□ 0.26
CDCA2-202ENST00000380665 PLCH2O75038 1416 aa16.64■□□□□ 0.26
CDCA2-202ENST00000380665 ADGRL1O94910 1474 aa16.64■□□□□ 0.26
CDCA2-202ENST00000380665 FANCAO15360 1455 aa16.64■□□□□ 0.25
CDCA2-202ENST00000380665 TPRNQ4KMQ1 711 aa16.64■□□□□ 0.25
CDCA2-202ENST00000380665 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
CDCA2-202ENST00000380665 RIPK4P57078 832 aa16.63■□□□□ 0.25
CDCA2-202ENST00000380665 FAM161AQ3B820 660 aa16.63■□□□□ 0.25
CDCA2-202ENST00000380665 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
CDCA2-202ENST00000380665 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
CDCA2-202ENST00000380665 ARHGEF12Q9NZN5 1544 aa16.62■□□□□ 0.25
CDCA2-202ENST00000380665 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
CDCA2-202ENST00000380665 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
CDCA2-202ENST00000380665 IGHDP01880 384 aa16.62■□□□□ 0.25
CDCA2-202ENST00000380665 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
CDCA2-202ENST00000380665 SAMD9LQ8IVG5 1584 aa16.62■□□□□ 0.25
CDCA2-202ENST00000380665 LRPPRCP42704 1394 aaKnown RBP16.61■□□□□ 0.25
CDCA2-202ENST00000380665 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
CDCA2-202ENST00000380665 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
CDCA2-202ENST00000380665 LMOD2Q6P5Q4 547 aa16.6■□□□□ 0.25
CDCA2-202ENST00000380665 ABCA8O94911 1581 aa16.6■□□□□ 0.25
CDCA2-202ENST00000380665 KDM5CP41229 1560 aa16.6■□□□□ 0.25
CDCA2-202ENST00000380665 TTC37Q6PGP7 1564 aa16.6■□□□□ 0.25
CDCA2-202ENST00000380665 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDCA2-202ENST00000380665 UGGT1Q9NYU2 1555 aa16.6■□□□□ 0.25
CDCA2-202ENST00000380665 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
CDCA2-202ENST00000380665 MYH16Q9H6N6 1097 aa16.59■□□□□ 0.25
CDCA2-202ENST00000380665 TERF2IPQ9NYB0 399 aa16.59■□□□□ 0.25
CDCA2-202ENST00000380665 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.25
CDCA2-202ENST00000380665 NUTM2GQ5VZR2 741 aa16.57■□□□□ 0.24
CDCA2-202ENST00000380665 CDC42BPAQ5VT25 1732 aa16.57■□□□□ 0.24
CDCA2-202ENST00000380665 NECTIN2Q92692 538 aa16.57■□□□□ 0.24
CDCA2-202ENST00000380665 MAGI2Q86UL8 1455 aa16.56■□□□□ 0.24
CDCA2-202ENST00000380665 NCKAP5LQ9HCH0 1330 aa16.56■□□□□ 0.24
CDCA2-202ENST00000380665 SHANK2Q9UPX8 1470 aa16.56■□□□□ 0.24
CDCA2-202ENST00000380665 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
CDCA2-202ENST00000380665 LNPKQ9C0E8 428 aa16.56■□□□□ 0.24
CDCA2-202ENST00000380665 SCAF11Q99590 1463 aaKnown RBP16.55■□□□□ 0.24
CDCA2-202ENST00000380665 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
CDCA2-202ENST00000380665 IL27Q8NEV9 243 aa16.55■□□□□ 0.24
CDCA2-202ENST00000380665 ZNF428Q96B54 188 aa16.55■□□□□ 0.24
CDCA2-202ENST00000380665 COL17A1Q9UMD9 1497 aaPredicted RBP16.55■□□□□ 0.24
CDCA2-202ENST00000380665 RLBP1P12271 317 aa16.54■□□□□ 0.24
CDCA2-202ENST00000380665 DIAPH1O60610 1272 aaKnown RBP16.54■□□□□ 0.24
CDCA2-202ENST00000380665 FRAT2O75474 233 aaPredicted RBP16.54■□□□□ 0.24
CDCA2-202ENST00000380665 MS4A1P11836 297 aa16.54■□□□□ 0.24
CDCA2-202ENST00000380665 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
CDCA2-202ENST00000380665 CDK19Q9BWU1 502 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms