RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 YEATS2Q9ULM3 1422 aa34.07■■■■□ 3.04
NDEL1-202ENST00000380025 NRXN1Q9ULB1 1477 aa34.06■■■■□ 3.04
NDEL1-202ENST00000380025 ADGRF5Q8IZF2 1346 aa34.05■■■■□ 3.04
NDEL1-202ENST00000380025 MYBBP1AQ9BQG0 1328 aaKnown RBP34.05■■■■□ 3.04
NDEL1-202ENST00000380025 SIGLEC1Q9BZZ2 1709 aa34.04■■■■□ 3.04
NDEL1-202ENST00000380025 PARD3Q8TEW0 1356 aa34.02■■■■□ 3.04
NDEL1-202ENST00000380025 NEFLP07196 543 aa34.01■■■■□ 3.04
NDEL1-202ENST00000380025 FAM69CQ0P6D2 419 aa34.01■■■■□ 3.04
NDEL1-202ENST00000380025 ZC3H13Q5T200 1668 aaKnown RBP34.01■■■■□ 3.04
NDEL1-202ENST00000380025 BRD4O60885 1362 aaPredicted RBP34.01■■■■□ 3.03
NDEL1-202ENST00000380025 ZMYM4Q5VZL5 1548 aa34■■■■□ 3.03
NDEL1-202ENST00000380025 PPLO60437 1756 aa34■■■■□ 3.03
NDEL1-202ENST00000380025 PNISRQ8TF01 805 aaKnown RBP33.99■■■■□ 3.03
NDEL1-202ENST00000380025 NOS1P29475 1434 aa33.99■■■■□ 3.03
NDEL1-202ENST00000380025 CFAP70Q5T0N1 1121 aa33.99■■■■□ 3.03
NDEL1-202ENST00000380025 TMC1Q8TDI8 760 aa33.99■■■■□ 3.03
NDEL1-202ENST00000380025 EIF3AQ14152 1382 aaKnown RBP33.98■■■■□ 3.03
NDEL1-202ENST00000380025 PANK3Q9H999 370 aa33.97■■■■□ 3.03
NDEL1-202ENST00000380025 PIK3C2BO00750 1634 aa33.96■■■■□ 3.03
NDEL1-202ENST00000380025 SYNMO15061 1565 aa33.95■■■■□ 3.03
NDEL1-202ENST00000380025 TSPOAP1O95153 1857 aa33.94■■■■□ 3.02
NDEL1-202ENST00000380025 ARHGAP31Q2M1Z3 1444 aa33.94■■■■□ 3.02
NDEL1-202ENST00000380025 CHGAP10645 457 aaKnown RBP33.94■■■■□ 3.02
NDEL1-202ENST00000380025 LRPPRCP42704 1394 aaKnown RBP33.91■■■■□ 3.02
NDEL1-202ENST00000380025 SETBP1Q9Y6X0 1596 aa33.9■■■■□ 3.02
NDEL1-202ENST00000380025 BCANQ96GW7 911 aa33.89■■■■□ 3.02
NDEL1-202ENST00000380025 MYOM1P52179 1685 aa33.89■■■■□ 3.02
NDEL1-202ENST00000380025 PIK3C2GO75747 1445 aa33.88■■■■□ 3.01
NDEL1-202ENST00000380025 CDCA8Q53HL2 280 aa33.88■■■■□ 3.01
NDEL1-202ENST00000380025 NLRP13Q86W25 1043 aa33.88■■■■□ 3.01
NDEL1-202ENST00000380025 MYO3AQ8NEV4 1616 aa33.87■■■■□ 3.01
NDEL1-202ENST00000380025 PELP1Q8IZL8 1130 aaKnown RBP33.85■■■■□ 3.01
NDEL1-202ENST00000380025 RPGRIP1LQ68CZ1 1315 aa33.85■■■■□ 3.01
NDEL1-202ENST00000380025 KDM5AP29375 1690 aaKnown RBP33.85■■■■□ 3.01
NDEL1-202ENST00000380025 CC2D1BQ5T0F9 858 aaKnown RBP33.84■■■■□ 3.01
NDEL1-202ENST00000380025 ERVK-7P63135 1459 aa33.8■■■■□ 3
NDEL1-202ENST00000380025 PREX1Q8TCU6 1659 aa33.79■■■■□ 3
NDEL1-202ENST00000380025 NEXMIFQ5QGS0 1516 aa33.79■■■■□ 3
NDEL1-202ENST00000380025 ADGRB1O14514 1584 aa33.79■■■■□ 3
NDEL1-202ENST00000380025 C14orf93Q9H972 538 aaKnown RBP33.78■■■■□ 3
NDEL1-202ENST00000380025 REREQ9P2R6 1566 aa33.78■■■■□ 3
NDEL1-202ENST00000380025 SLC24A1O60721 1099 aa33.76■■■□□ 2.99
NDEL1-202ENST00000380025 SBNO2Q9Y2G9 1366 aa33.75■■■□□ 2.99
NDEL1-202ENST00000380025 SMG6Q86US8 1419 aaKnown RBP33.74■■■□□ 2.99
NDEL1-202ENST00000380025 KIF13AQ9H1H9 1805 aa33.72■■■□□ 2.99
NDEL1-202ENST00000380025 KNSTRNQ9Y448 316 aa33.72■■■□□ 2.99
NDEL1-202ENST00000380025 IDI1Q13907 227 aa33.71■■■□□ 2.99
NDEL1-202ENST00000380025 AGLP35573 1532 aa33.7■■■□□ 2.99
NDEL1-202ENST00000380025 AMER1Q5JTC6 1135 aaPredicted RBP33.7■■■□□ 2.98
NDEL1-202ENST00000380025 SLC52A1Q9NWF4 448 aa33.7■■■□□ 2.98
NDEL1-202ENST00000380025 ASXL1Q8IXJ9 1541 aa33.69■■■□□ 2.98
NDEL1-202ENST00000380025 MYO5BQ9ULV0 1848 aa33.69■■■□□ 2.98
NDEL1-202ENST00000380025 QRICH2Q9H0J4 1663 aa33.68■■■□□ 2.98
NDEL1-202ENST00000380025 CENPJQ9HC77 1338 aaPredicted RBP33.68■■■□□ 2.98
NDEL1-202ENST00000380025 TMEM131LA2VDJ0 1609 aa33.66■■■□□ 2.98
NDEL1-202ENST00000380025 VGFO15240 615 aaPredicted RBP33.65■■■□□ 2.98
NDEL1-202ENST00000380025 IRX6P78412 446 aaPredicted RBP33.65■■■□□ 2.98
NDEL1-202ENST00000380025 TRAK1Q9UPV9 953 aa33.64■■■□□ 2.98
NDEL1-202ENST00000380025 NUDCQ9Y266 331 aa33.64■■■□□ 2.98
NDEL1-202ENST00000380025 SENP3-EIF4A1A0A087X0R7 540 aa33.63■■■□□ 2.97
NDEL1-202ENST00000380025 TMEM132EQ6IEE7 984 aa33.63■■■□□ 2.97
NDEL1-202ENST00000380025 NPC1L1Q9UHC9 1359 aa33.63■■■□□ 2.97
NDEL1-202ENST00000380025 NUTM2DQ5VT03 806 aaPredicted RBP33.62■■■□□ 2.97
NDEL1-202ENST00000380025 ZFYVE9O95405 1425 aa33.62■■■□□ 2.97
NDEL1-202ENST00000380025 INSRP06213 1382 aa33.6■■■□□ 2.97
NDEL1-202ENST00000380025 ARHGEF28Q8N1W1 1705 aaKnown RBP33.58■■■□□ 2.97
NDEL1-202ENST00000380025 CLTCQ00610 1675 aaKnown RBP33.58■■■□□ 2.97
NDEL1-202ENST00000380025 FBXO31Q5XUX0 539 aaPredicted RBP33.57■■■□□ 2.96
NDEL1-202ENST00000380025 ARHGEF40Q8TER5 1519 aa33.57■■■□□ 2.96
NDEL1-202ENST00000380025 PPP2R1AP30153 589 aa33.57■■■□□ 2.96
NDEL1-202ENST00000380025 ERICH6BQ5W0A0 696 aa33.57■■■□□ 2.96
NDEL1-202ENST00000380025 PPP6R1Q9UPN7 881 aa33.57■■■□□ 2.96
NDEL1-202ENST00000380025 BLMP54132 1417 aaPredicted RBP33.56■■■□□ 2.96
NDEL1-202ENST00000380025 CARD14Q9BXL6 1004 aa33.5■■■□□ 2.95
NDEL1-202ENST00000380025 SPATA31D1Q6ZQQ2 1576 aa33.47■■■□□ 2.95
NDEL1-202ENST00000380025 RNF123Q5XPI4 1314 aa33.46■■■□□ 2.95
NDEL1-202ENST00000380025 TSHZ2Q9NRE2 1034 aa33.44■■■□□ 2.94
NDEL1-202ENST00000380025 TULP4Q9NRJ4 1543 aa33.44■■■□□ 2.94
NDEL1-202ENST00000380025 PPP4R2Q9NY27 417 aa33.4■■■□□ 2.94
NDEL1-202ENST00000380025 SALL2Q9Y467 1007 aaPredicted RBP33.4■■■□□ 2.94
NDEL1-202ENST00000380025 MLECQ14165 292 aa33.39■■■□□ 2.94
NDEL1-202ENST00000380025 ADAMTS8Q9UP79 889 aa33.39■■■□□ 2.94
NDEL1-202ENST00000380025 PDE3BQ13370 1112 aa33.38■■■□□ 2.93
NDEL1-202ENST00000380025 PUS7Q96PZ0 661 aaKnown RBP33.37■■■□□ 2.93
NDEL1-202ENST00000380025 SLC12A5Q9H2X9 1139 aa33.36■■■□□ 2.93
NDEL1-202ENST00000380025 EVC2Q86UK5 1308 aa33.36■■■□□ 2.93
NDEL1-202ENST00000380025 NSD3Q9BZ95 1437 aa33.36■■■□□ 2.93
NDEL1-202ENST00000380025 A2ML1A8K2U0 1454 aa33.35■■■□□ 2.93
NDEL1-202ENST00000380025 ALKQ9UM73 1620 aa33.35■■■□□ 2.93
NDEL1-202ENST00000380025 SENP3Q9H4L4 574 aaPredicted RBP33.34■■■□□ 2.93
NDEL1-202ENST00000380025 PTPRMP28827 1452 aa33.34■■■□□ 2.93
NDEL1-202ENST00000380025 STAG3Q9UJ98 1225 aa33.34■■■□□ 2.93
NDEL1-202ENST00000380025 USP32Q8NFA0 1604 aa33.34■■■□□ 2.93
NDEL1-202ENST00000380025 WDR43Q15061 677 aaKnown RBP eCLIP33.33■■■□□ 2.93
NDEL1-202ENST00000380025 YTHDC2Q9H6S0 1430 aaKnown RBP33.31■■■□□ 2.92
NDEL1-202ENST00000380025 STK26Q9P289 416 aa33.31■■■□□ 2.92
NDEL1-202ENST00000380025 SAFB2Q14151 953 aaKnown RBP eCLIP33.26■■■□□ 2.92
NDEL1-202ENST00000380025 CDCA7LQ96GN5 454 aa33.26■■■□□ 2.92
NDEL1-202ENST00000380025 RIMS2Q9UQ26 1411 aa33.24■■■□□ 2.91
NDEL1-202ENST00000380025 ZMYM3Q14202 1370 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms