RNA–Protein interactions for RNA: ENST00000379370.6

AGRN-201, Transcript of agrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AGRN, Length 7,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-201ENST00000379370 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
AGRN-201ENST00000379370 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
AGRN-201ENST00000379370 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
AGRN-201ENST00000379370 AQRO60306 1485 aaKnown RBP eCLIP17.68■□□□□ 0.426e-7■■■■■ 36.4
AGRN-201ENST00000379370 MCTP1Q6DN14 999 aa17.68■□□□□ 0.42
AGRN-201ENST00000379370 AIMP1Q12904 312 aaKnown RBP17.67■□□□□ 0.42
AGRN-201ENST00000379370 SYNE3Q6ZMZ3 975 aa17.67■□□□□ 0.42
AGRN-201ENST00000379370 CCAR1Q8IX12 1150 aaKnown RBP17.67■□□□□ 0.42
AGRN-201ENST00000379370 NLRP2Q9NX02 1062 aa17.67■□□□□ 0.42
AGRN-201ENST00000379370 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
AGRN-201ENST00000379370 FAM184AQ8NB25 1140 aa17.67■□□□□ 0.42
AGRN-201ENST00000379370 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
AGRN-201ENST00000379370 ZNF428Q96B54 188 aa17.66■□□□□ 0.42
AGRN-201ENST00000379370 CCER2I3L3R5 266 aa17.66■□□□□ 0.42
AGRN-201ENST00000379370 CCDC43Q96MW1 224 aaKnown RBP17.66■□□□□ 0.42
AGRN-201ENST00000379370 ST20-MTHFSA0A0A6YYL1 179 aa17.66■□□□□ 0.42
AGRN-201ENST00000379370 PMFBP1Q8TBY8 1022 aa17.66■□□□□ 0.42
AGRN-201ENST00000379370 GBP4Q96PP9 640 aa17.65■□□□□ 0.42
AGRN-201ENST00000379370 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.65■□□□□ 0.426e-7■■□□□ 11.5
AGRN-201ENST00000379370 CENPJQ9HC77 1338 aaPredicted RBP17.65■□□□□ 0.42
AGRN-201ENST00000379370 KDM4AO75164 1064 aa17.63■□□□□ 0.41
AGRN-201ENST00000379370 FOSBP53539 338 aa17.63■□□□□ 0.41
AGRN-201ENST00000379370 IKQ13123 557 aaPredicted RBP17.63■□□□□ 0.41
AGRN-201ENST00000379370 ANKRD45Q5TZF3 282 aa17.63■□□□□ 0.41
AGRN-201ENST00000379370 ARHGAP5Q13017 1502 aa17.63■□□□□ 0.41
AGRN-201ENST00000379370 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
AGRN-201ENST00000379370 RAPGEF4Q8WZA2 1011 aa17.62■□□□□ 0.41
AGRN-201ENST00000379370 PCMTD1Q96MG8 357 aaPredicted RBP17.61■□□□□ 0.41
AGRN-201ENST00000379370 TPM3P06753 285 aa17.6■□□□□ 0.41
AGRN-201ENST00000379370 SYAP1Q96A49 352 aaPredicted RBP17.59■□□□□ 0.41
AGRN-201ENST00000379370 NFXL1Q6ZNB6 911 aa17.59■□□□□ 0.41
AGRN-201ENST00000379370 RBM42Q9BTD8 480 aaKnown RBP17.59■□□□□ 0.41
AGRN-201ENST00000379370 KIF15Q9NS87 1388 aa17.58■□□□□ 0.41
AGRN-201ENST00000379370 HMOX1P09601 288 aa17.57■□□□□ 0.4
AGRN-201ENST00000379370 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
AGRN-201ENST00000379370 DIAPH3Q9NSV4 1193 aa17.57■□□□□ 0.4
AGRN-201ENST00000379370 NEUROD6Q96NK8 337 aa17.57■□□□□ 0.4
AGRN-201ENST00000379370 TSR1Q2NL82 804 aaKnown RBP17.56■□□□□ 0.4
AGRN-201ENST00000379370 RIC3Q7Z5B4 369 aa17.56■□□□□ 0.4
AGRN-201ENST00000379370 NLRP13Q86W25 1043 aa17.56■□□□□ 0.4
AGRN-201ENST00000379370 TRIM29Q14134 588 aa17.55■□□□□ 0.4
AGRN-201ENST00000379370 IFIT2P09913 472 aaKnown RBP17.55■□□□□ 0.4
AGRN-201ENST00000379370 CCAR2Q8N163 923 aaKnown RBP17.55■□□□□ 0.4
AGRN-201ENST00000379370 KIF3AQ9Y496 699 aa17.55■□□□□ 0.4
AGRN-201ENST00000379370 TMEM132AQ24JP5 1023 aa17.54■□□□□ 0.4
AGRN-201ENST00000379370 DDX58O95786 925 aaKnown RBP17.54■□□□□ 0.4
AGRN-201ENST00000379370 CSPP1Q1MSJ5 1256 aa17.54■□□□□ 0.4
AGRN-201ENST00000379370 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
AGRN-201ENST00000379370 IBSPP21815 317 aaPredicted RBP17.54■□□□□ 0.4
AGRN-201ENST00000379370 FKBP5Q13451 457 aaPredicted RBP17.54■□□□□ 0.4
AGRN-201ENST00000379370 DIAPH1O60610 1272 aaKnown RBP17.53■□□□□ 0.4
AGRN-201ENST00000379370 ST18O60284 1047 aa17.53■□□□□ 0.4
AGRN-201ENST00000379370 PROSER2Q86WR7 435 aaPredicted RBP17.53■□□□□ 0.4
AGRN-201ENST00000379370 CABP2Q9NPB3 220 aa17.53■□□□□ 0.4
AGRN-201ENST00000379370 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.53■□□□□ 0.41e-6■■■■■ 89.6
AGRN-201ENST00000379370 TPM2P07951 284 aa17.52■□□□□ 0.4
AGRN-201ENST00000379370 ERICH2A1L162 156 aa17.52■□□□□ 0.4
AGRN-201ENST00000379370 TRDNQ13061 729 aa17.52■□□□□ 0.39
AGRN-201ENST00000379370 LRRFIP1Q32MZ4 808 aaKnown RBP17.52■□□□□ 0.39
AGRN-201ENST00000379370 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
AGRN-201ENST00000379370 ANO2Q9NQ90 1003 aa17.51■□□□□ 0.39
AGRN-201ENST00000379370 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
AGRN-201ENST00000379370 CPLX1O14810 134 aa17.51■□□□□ 0.39
AGRN-201ENST00000379370 G3BP1Q13283 466 aaKnown RBP eCLIP17.51■□□□□ 0.39
AGRN-201ENST00000379370 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
AGRN-201ENST00000379370 PAF1Q8N7H5 531 aa17.51■□□□□ 0.39
AGRN-201ENST00000379370 GOLGA6L1Q8N7Z2 621 aa17.51■□□□□ 0.39
AGRN-201ENST00000379370 ATP2B2Q01814 1243 aa17.51■□□□□ 0.39
AGRN-201ENST00000379370 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
AGRN-201ENST00000379370 DHX57Q6P158 1386 aaKnown RBP17.5■□□□□ 0.39
AGRN-201ENST00000379370 TXNDC2Q86VQ3 553 aa17.5■□□□□ 0.39
AGRN-201ENST00000379370 ABTB2Q8N961 1025 aa17.5■□□□□ 0.39
AGRN-201ENST00000379370 DDX54Q8TDD1 881 aaKnown RBP17.5■□□□□ 0.39
AGRN-201ENST00000379370 WASHC4Q2M389 1173 aa17.49■□□□□ 0.39
AGRN-201ENST00000379370 NLRP6P59044 892 aa17.49■□□□□ 0.39
AGRN-201ENST00000379370 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
AGRN-201ENST00000379370 STK11IPQ8N1F8 1099 aa17.49■□□□□ 0.39
AGRN-201ENST00000379370 USP47Q96K76 1375 aa17.49■□□□□ 0.39
AGRN-201ENST00000379370 PATL2C9JE40 543 aaKnown RBP17.49■□□□□ 0.39
AGRN-201ENST00000379370 RIPK4P57078 832 aa17.49■□□□□ 0.39
AGRN-201ENST00000379370 PHLDB1Q86UU1 1377 aa17.48■□□□□ 0.39
AGRN-201ENST00000379370 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
AGRN-201ENST00000379370 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
AGRN-201ENST00000379370 RBM5P52756 815 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■□□□ 12.6
AGRN-201ENST00000379370 ZFYVE27Q5T4F4 411 aa17.45■□□□□ 0.38
AGRN-201ENST00000379370 AFAP1Q8N556 730 aa17.45■□□□□ 0.38
AGRN-201ENST00000379370 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
AGRN-201ENST00000379370 NESP48681 1621 aa17.45■□□□□ 0.38
AGRN-201ENST00000379370 PAXIP1Q6ZW49 1069 aaPredicted RBP17.44■□□□□ 0.38
AGRN-201ENST00000379370 GOLGA6L19H0YKK7 550 aa17.44■□□□□ 0.38
AGRN-201ENST00000379370 MYOM3Q5VTT5 1437 aa17.44■□□□□ 0.38
AGRN-201ENST00000379370 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
AGRN-201ENST00000379370 BECN2A8MW95 431 aa17.43■□□□□ 0.38
AGRN-201ENST00000379370 KIF6Q6ZMV9 814 aa17.43■□□□□ 0.38
AGRN-201ENST00000379370 CUX1P39880 1505 aa17.43■□□□□ 0.38
AGRN-201ENST00000379370 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
AGRN-201ENST00000379370 TOM1L2Q6ZVM7 507 aa17.42■□□□□ 0.38
AGRN-201ENST00000379370 GRIN2BQ13224 1484 aa17.42■□□□□ 0.38
AGRN-201ENST00000379370 CCDC47Q96A33 483 aaKnown RBP17.42■□□□□ 0.38
AGRN-201ENST00000379370 PTMSP20962 102 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms