RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 L3MBTL2Q969R5 705 aa28.25■■■□□ 2.11
AUP1-201ENST00000377526 RIMS2Q9UQ26 1411 aa28.24■■■□□ 2.11
AUP1-201ENST00000377526 RPGRIP1LQ68CZ1 1315 aa28.21■■■□□ 2.11
AUP1-201ENST00000377526 HSPA2P54652 639 aa28.19■■■□□ 2.1
AUP1-201ENST00000377526 NUTM2DQ5VT03 806 aaPredicted RBP28.19■■■□□ 2.1
AUP1-201ENST00000377526 DCAF11Q8TEB1 546 aa28.19■■■□□ 2.1
AUP1-201ENST00000377526 MYOM2P54296 1465 aa28.16■■■□□ 2.1
AUP1-201ENST00000377526 LTKP29376 864 aa28.16■■■□□ 2.1
AUP1-201ENST00000377526 TIMELESSQ9UNS1 1208 aa28.16■■■□□ 2.1
AUP1-201ENST00000377526 KDM2AQ9Y2K7 1162 aa28.15■■■□□ 2.1
AUP1-201ENST00000377526 POLR1AO95602 1720 aaPredicted RBP28.14■■■□□ 2.09
AUP1-201ENST00000377526 SCAF11Q99590 1463 aaKnown RBP28.14■■■□□ 2.09
AUP1-201ENST00000377526 AEBP2Q6ZN18 517 aaPredicted RBP28.13■■■□□ 2.09
AUP1-201ENST00000377526 ADGRF5Q8IZF2 1346 aa28.13■■■□□ 2.09
AUP1-201ENST00000377526 TXNDC2Q86VQ3 553 aa28.12■■■□□ 2.09
AUP1-201ENST00000377526 NRXN1Q9ULB1 1477 aa28.12■■■□□ 2.09
AUP1-201ENST00000377526 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.11■■■□□ 2.09
AUP1-201ENST00000377526 EID1Q9Y6B2 187 aa28.1■■■□□ 2.09
AUP1-201ENST00000377526 VGFO15240 615 aaPredicted RBP28.09■■■□□ 2.09
AUP1-201ENST00000377526 PPP1R15AO75807 674 aaPredicted RBP28.09■■■□□ 2.09
AUP1-201ENST00000377526 HDGFP51858 240 aaKnown RBP28.08■■■□□ 2.09
AUP1-201ENST00000377526 ANKLE2Q86XL3 938 aa28.08■■■□□ 2.09
AUP1-201ENST00000377526 STRCQ7RTU9 1775 aa28.08■■■□□ 2.09
AUP1-201ENST00000377526 PRAG1Q86YV5 1406 aa28.07■■■□□ 2.08
AUP1-201ENST00000377526 PIK3C2GO75747 1445 aa28.07■■■□□ 2.08
AUP1-201ENST00000377526 SENP3Q9H4L4 574 aaPredicted RBP28.07■■■□□ 2.08
AUP1-201ENST00000377526 NRXN3Q9Y4C0 1643 aa28.06■■■□□ 2.08
AUP1-201ENST00000377526 IQGAP1P46940 1657 aa28.06■■■□□ 2.08
AUP1-201ENST00000377526 NCKAP5LQ9HCH0 1330 aa28.06■■■□□ 2.08
AUP1-201ENST00000377526 STAC3Q96MF2 364 aa28.06■■■□□ 2.08
AUP1-201ENST00000377526 PLEKHG1Q9ULL1 1385 aa28.05■■■□□ 2.08
AUP1-201ENST00000377526 SETBP1Q9Y6X0 1596 aa28.04■■■□□ 2.08
AUP1-201ENST00000377526 MED14O60244 1454 aa28.03■■■□□ 2.08
AUP1-201ENST00000377526 NBPF8Q3BBV2 869 aa28.03■■■□□ 2.08
AUP1-201ENST00000377526 NPHP4O75161 1426 aaPredicted RBP28■■■□□ 2.07
AUP1-201ENST00000377526 SETD1AO15047 1707 aaKnown RBP27.99■■■□□ 2.07
AUP1-201ENST00000377526 TRPM1Q7Z4N2 1603 aa27.99■■■□□ 2.07
AUP1-201ENST00000377526 ADAMTS13Q76LX8 1427 aa27.98■■■□□ 2.07
AUP1-201ENST00000377526 ALKQ9UM73 1620 aa27.97■■■□□ 2.07
AUP1-201ENST00000377526 LAMC1P11047 1609 aa27.96■■■□□ 2.07
AUP1-201ENST00000377526 KIAA1210Q9ULL0 1709 aa27.96■■■□□ 2.07
AUP1-201ENST00000377526 ZEB1P37275 1124 aaPredicted RBP27.94■■■□□ 2.06
AUP1-201ENST00000377526 CFAP70Q5T0N1 1121 aa27.94■■■□□ 2.06
AUP1-201ENST00000377526 BCANQ96GW7 911 aa27.94■■■□□ 2.06
AUP1-201ENST00000377526 DIP2AQ14689 1571 aa27.93■■■□□ 2.06
AUP1-201ENST00000377526 SLC26A8Q96RN1 970 aa27.92■■■□□ 2.06
AUP1-201ENST00000377526 C14orf93Q9H972 538 aaKnown RBP27.92■■■□□ 2.06
AUP1-201ENST00000377526 ASXL1Q8IXJ9 1541 aa27.92■■■□□ 2.06
AUP1-201ENST00000377526 RALGAPBQ86X10 1494 aa27.91■■■□□ 2.06
AUP1-201ENST00000377526 ADGRB1O14514 1584 aa27.88■■■□□ 2.05
AUP1-201ENST00000377526 NBPF1Q3BBV0 1214 aa27.88■■■□□ 2.05
AUP1-201ENST00000377526 METP08581 1390 aa27.87■■■□□ 2.05
AUP1-201ENST00000377526 TBX22Q9Y458 520 aa27.86■■■□□ 2.05
AUP1-201ENST00000377526 TMEM132EQ6IEE7 984 aa27.84■■■□□ 2.05
AUP1-201ENST00000377526 ROCK2O75116 1388 aaKnown RBP27.83■■■□□ 2.05
AUP1-201ENST00000377526 GPRASP1Q5JY77 1395 aa27.82■■■□□ 2.04
AUP1-201ENST00000377526 PTPRUQ92729 1446 aa27.8■■■□□ 2.04
AUP1-201ENST00000377526 CHD2O14647 1828 aaKnown RBP27.79■■■□□ 2.04
AUP1-201ENST00000377526 DMRT2Q9Y5R5 561 aa27.78■■■□□ 2.04
AUP1-201ENST00000377526 YTHDC2Q9H6S0 1430 aaKnown RBP27.77■■■□□ 2.04
AUP1-201ENST00000377526 PIK3R4Q99570 1358 aa27.77■■■□□ 2.04
AUP1-201ENST00000377526 XRN1Q8IZH2 1706 aaKnown RBP27.76■■■□□ 2.03
AUP1-201ENST00000377526 LRPPRCP42704 1394 aaKnown RBP27.75■■■□□ 2.03
AUP1-201ENST00000377526 CARD11Q9BXL7 1154 aa27.75■■■□□ 2.03
AUP1-201ENST00000377526 KNDC1Q76NI1 1749 aa27.74■■■□□ 2.03
AUP1-201ENST00000377526 STRCP1A6NGW2 1772 aa27.74■■■□□ 2.03
AUP1-201ENST00000377526 NWD1Q149M9 1564 aa27.74■■■□□ 2.03
AUP1-201ENST00000377526 STK26Q9P289 416 aa27.72■■■□□ 2.03
AUP1-201ENST00000377526 ARHGEF28Q8N1W1 1705 aaKnown RBP27.71■■■□□ 2.03
AUP1-201ENST00000377526 AMOTL2Q9Y2J4 779 aa27.7■■■□□ 2.02
AUP1-201ENST00000377526 TECPR2O15040 1411 aa27.7■■■□□ 2.02
AUP1-201ENST00000377526 TRAK1Q9UPV9 953 aa27.69■■■□□ 2.02
AUP1-201ENST00000377526 CPS1P31327 1500 aa27.69■■■□□ 2.02
AUP1-201ENST00000377526 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
AUP1-201ENST00000377526 DLC1Q96QB1 1528 aa27.67■■■□□ 2.02
AUP1-201ENST00000377526 KCNA6P17658 529 aa27.67■■■□□ 2.02
AUP1-201ENST00000377526 ZNF335Q9H4Z2 1342 aaPredicted RBP27.67■■■□□ 2.02
AUP1-201ENST00000377526 USP47Q96K76 1375 aa27.65■■■□□ 2.02
AUP1-201ENST00000377526 ROBO2Q9HCK4 1378 aa27.65■■■□□ 2.02
AUP1-201ENST00000377526 PTCH1Q13635 1447 aa27.64■■■□□ 2.02
AUP1-201ENST00000377526 NKTRP30414 1462 aaKnown RBP27.62■■■□□ 2.01
AUP1-201ENST00000377526 PLEKHH1Q9ULM0 1364 aa27.61■■■□□ 2.01
AUP1-201ENST00000377526 FAM135BQ49AJ0 1406 aa27.6■■■□□ 2.01
AUP1-201ENST00000377526 WAPLQ7Z5K2 1190 aa27.58■■■□□ 2.01
AUP1-201ENST00000377526 PRAM1Q96QH2 718 aa27.58■■■□□ 2.01
AUP1-201ENST00000377526 EIF3AQ14152 1382 aaKnown RBP27.58■■■□□ 2.01
AUP1-201ENST00000377526 QRICH2Q9H0J4 1663 aa27.57■■■□□ 2
AUP1-201ENST00000377526 SIRT1Q96EB6 747 aa27.57■■■□□ 2
AUP1-201ENST00000377526 EIF4G2P78344 907 aaKnown RBP eCLIP27.56■■■□□ 2
AUP1-201ENST00000377526 LTBP4Q8N2S1 1624 aa27.56■■■□□ 2
AUP1-201ENST00000377526 HSPA5P11021 654 aaKnown RBP27.56■■■□□ 2
AUP1-201ENST00000377526 CENPJQ9HC77 1338 aaPredicted RBP27.54■■■□□ 2
AUP1-201ENST00000377526 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.54■■■□□ 2
AUP1-201ENST00000377526 ST20-MTHFSA0A0A6YYL1 179 aa27.54■■■□□ 2
AUP1-201ENST00000377526 SAFB2Q14151 953 aaKnown RBP eCLIP27.54■■■□□ 2
AUP1-201ENST00000377526 RBM33Q96EV2 1170 aaKnown RBP27.53■■■□□ 2
AUP1-201ENST00000377526 POGKQ9P215 609 aa27.53■■■□□ 2
AUP1-201ENST00000377526 XIRP1Q702N8 1843 aaKnown RBP27.53■■■□□ 2
AUP1-201ENST00000377526 LRRC7Q96NW7 1537 aa27.52■■■□□ 2
AUP1-201ENST00000377526 HIRIP3Q9BW71 556 aaPredicted RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms