RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 RGL3Q3MIN7 710 aa27.68■■■□□ 2.02
SPSB1-203ENST00000377399 ZNF326Q5BKZ1 582 aaKnown RBP27.67■■■□□ 2.02
SPSB1-203ENST00000377399 TIMELESSQ9UNS1 1208 aa27.67■■■□□ 2.02
SPSB1-203ENST00000377399 MYO5BQ9ULV0 1848 aa27.66■■■□□ 2.02
SPSB1-203ENST00000377399 UBR1Q8IWV7 1749 aa27.66■■■□□ 2.02
SPSB1-203ENST00000377399 ZEB1P37275 1124 aaPredicted RBP27.65■■■□□ 2.02
SPSB1-203ENST00000377399 UBAP1LF5GYI3 381 aa27.61■■■□□ 2.01
SPSB1-203ENST00000377399 THEMISQ8N1K5 641 aaPredicted RBP27.6■■■□□ 2.01
SPSB1-203ENST00000377399 L3MBTL2Q969R5 705 aa27.6■■■□□ 2.01
SPSB1-203ENST00000377399 RPGRIP1LQ68CZ1 1315 aa27.59■■■□□ 2.01
SPSB1-203ENST00000377399 ANKLE2Q86XL3 938 aa27.57■■■□□ 2
SPSB1-203ENST00000377399 IFT172Q9UG01 1749 aa27.56■■■□□ 2
SPSB1-203ENST00000377399 DCAF11Q8TEB1 546 aa27.56■■■□□ 2
SPSB1-203ENST00000377399 PPLO60437 1756 aa27.55■■■□□ 2
SPSB1-203ENST00000377399 NEXMIFQ5QGS0 1516 aa27.55■■■□□ 2
SPSB1-203ENST00000377399 POLR1AO95602 1720 aaPredicted RBP27.55■■■□□ 2
SPSB1-203ENST00000377399 RIMS2Q9UQ26 1411 aa27.53■■■□□ 2
SPSB1-203ENST00000377399 KDM2AQ9Y2K7 1162 aa27.53■■■□□ 2
SPSB1-203ENST00000377399 TMEM2Q9UHN6 1383 aa27.52■■■□□ 2
SPSB1-203ENST00000377399 STAC3Q96MF2 364 aa27.52■■■□□ 2
SPSB1-203ENST00000377399 MYOM2P54296 1465 aa27.51■■■□□ 2
SPSB1-203ENST00000377399 HDGFP51858 240 aaKnown RBP27.51■■□□□ 1.99
SPSB1-203ENST00000377399 ILDR2Q71H61 639 aa27.51■■□□□ 1.99
SPSB1-203ENST00000377399 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.5■■□□□ 1.99
SPSB1-203ENST00000377399 SLIT1O75093 1534 aa27.5■■□□□ 1.99
SPSB1-203ENST00000377399 CPS1P31327 1500 aa27.49■■□□□ 1.99
SPSB1-203ENST00000377399 ZFYVE9O95405 1425 aa27.49■■□□□ 1.99
SPSB1-203ENST00000377399 PPP1R15AO75807 674 aaPredicted RBP27.48■■□□□ 1.99
SPSB1-203ENST00000377399 ARHGAP23Q9P227 1491 aa27.48■■□□□ 1.99
SPSB1-203ENST00000377399 VGFO15240 615 aaPredicted RBP27.47■■□□□ 1.99
SPSB1-203ENST00000377399 EID1Q9Y6B2 187 aa27.47■■□□□ 1.99
SPSB1-203ENST00000377399 MED14O60244 1454 aa27.45■■□□□ 1.99
SPSB1-203ENST00000377399 NUTM2DQ5VT03 806 aaPredicted RBP27.45■■□□□ 1.98
SPSB1-203ENST00000377399 SOCS7O14512 581 aa27.44■■□□□ 1.98
SPSB1-203ENST00000377399 NPHP4O75161 1426 aaPredicted RBP27.43■■□□□ 1.98
SPSB1-203ENST00000377399 TOM1O60784 492 aa27.43■■□□□ 1.98
SPSB1-203ENST00000377399 PRAG1Q86YV5 1406 aa27.42■■□□□ 1.98
SPSB1-203ENST00000377399 SCAF11Q99590 1463 aaKnown RBP27.42■■□□□ 1.98
SPSB1-203ENST00000377399 NRXN1Q9ULB1 1477 aa27.41■■□□□ 1.98
SPSB1-203ENST00000377399 TXNDC2Q86VQ3 553 aa27.41■■□□□ 1.98
SPSB1-203ENST00000377399 ADGRF5Q8IZF2 1346 aa27.41■■□□□ 1.98
SPSB1-203ENST00000377399 PIK3C2GO75747 1445 aa27.38■■□□□ 1.97
SPSB1-203ENST00000377399 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
SPSB1-203ENST00000377399 PLEKHG1Q9ULL1 1385 aa27.35■■□□□ 1.97
SPSB1-203ENST00000377399 LTKP29376 864 aa27.35■■□□□ 1.97
SPSB1-203ENST00000377399 PIP4K2BP78356 416 aa27.35■■□□□ 1.97
SPSB1-203ENST00000377399 NBPF8Q3BBV2 869 aa27.35■■□□□ 1.97
SPSB1-203ENST00000377399 BCANQ96GW7 911 aa27.35■■□□□ 1.97
SPSB1-203ENST00000377399 LAMC1P11047 1609 aa27.34■■□□□ 1.97
SPSB1-203ENST00000377399 IQGAP1P46940 1657 aa27.34■■□□□ 1.97
SPSB1-203ENST00000377399 TRPM1Q7Z4N2 1603 aa27.33■■□□□ 1.97
SPSB1-203ENST00000377399 SETBP1Q9Y6X0 1596 aa27.32■■□□□ 1.96
SPSB1-203ENST00000377399 KIAA1210Q9ULL0 1709 aa27.32■■□□□ 1.96
SPSB1-203ENST00000377399 RALGAPBQ86X10 1494 aa27.32■■□□□ 1.96
SPSB1-203ENST00000377399 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
SPSB1-203ENST00000377399 HSPA1LP34931 641 aa27.3■■□□□ 1.96
SPSB1-203ENST00000377399 NRXN3Q9Y4C0 1643 aa27.27■■□□□ 1.96
SPSB1-203ENST00000377399 ROCK2O75116 1388 aaKnown RBP27.27■■□□□ 1.96
SPSB1-203ENST00000377399 ALKQ9UM73 1620 aa27.27■■□□□ 1.96
SPSB1-203ENST00000377399 CFAP70Q5T0N1 1121 aa27.26■■□□□ 1.95
SPSB1-203ENST00000377399 C14orf93Q9H972 538 aaKnown RBP27.26■■□□□ 1.95
SPSB1-203ENST00000377399 DIP2AQ14689 1571 aa27.25■■□□□ 1.95
SPSB1-203ENST00000377399 LRRC7Q96NW7 1537 aa27.21■■□□□ 1.95
SPSB1-203ENST00000377399 ADAMTS13Q76LX8 1427 aa27.21■■□□□ 1.95
SPSB1-203ENST00000377399 SETD1AO15047 1707 aaKnown RBP27.21■■□□□ 1.95
SPSB1-203ENST00000377399 NBPF1Q3BBV0 1214 aa27.19■■□□□ 1.94
SPSB1-203ENST00000377399 CARD11Q9BXL7 1154 aa27.19■■□□□ 1.94
SPSB1-203ENST00000377399 GPRASP1Q5JY77 1395 aa27.19■■□□□ 1.94
SPSB1-203ENST00000377399 STRCP1A6NGW2 1772 aa27.18■■□□□ 1.94
SPSB1-203ENST00000377399 SLC26A8Q96RN1 970 aa27.18■■□□□ 1.94
SPSB1-203ENST00000377399 ADGRB1O14514 1584 aa27.17■■□□□ 1.94
SPSB1-203ENST00000377399 TBX22Q9Y458 520 aa27.16■■□□□ 1.94
SPSB1-203ENST00000377399 ASXL1Q8IXJ9 1541 aa27.16■■□□□ 1.94
SPSB1-203ENST00000377399 TMEM132EQ6IEE7 984 aa27.13■■□□□ 1.93
SPSB1-203ENST00000377399 MED1Q15648 1581 aaPredicted RBP27.13■■□□□ 1.93
SPSB1-203ENST00000377399 METP08581 1390 aa27.11■■□□□ 1.93
SPSB1-203ENST00000377399 YTHDC2Q9H6S0 1430 aaKnown RBP27.1■■□□□ 1.93
SPSB1-203ENST00000377399 PIK3R4Q99570 1358 aa27.09■■□□□ 1.93
SPSB1-203ENST00000377399 EIF3AQ14152 1382 aaKnown RBP27.09■■□□□ 1.93
SPSB1-203ENST00000377399 USP47Q96K76 1375 aa27.09■■□□□ 1.93
SPSB1-203ENST00000377399 LRPPRCP42704 1394 aaKnown RBP27.08■■□□□ 1.93
SPSB1-203ENST00000377399 EIF4G2P78344 907 aaKnown RBP eCLIP27.06■■□□□ 1.92
SPSB1-203ENST00000377399 STK26Q9P289 416 aa27.06■■□□□ 1.92
SPSB1-203ENST00000377399 KNDC1Q76NI1 1749 aa27.05■■□□□ 1.92
SPSB1-203ENST00000377399 TRAK1Q9UPV9 953 aa27.04■■□□□ 1.92
SPSB1-203ENST00000377399 PHF23Q9BUL5 403 aaPredicted RBP27.03■■□□□ 1.92
SPSB1-203ENST00000377399 ARHGEF28Q8N1W1 1705 aaKnown RBP27.02■■□□□ 1.92
SPSB1-203ENST00000377399 ABCC11Q96J66 1382 aa27.02■■□□□ 1.92
SPSB1-203ENST00000377399 DLC1Q96QB1 1528 aa27.01■■□□□ 1.91
SPSB1-203ENST00000377399 PTPRUQ92729 1446 aa27.01■■□□□ 1.91
SPSB1-203ENST00000377399 CHD2O14647 1828 aaKnown RBP27.01■■□□□ 1.91
SPSB1-203ENST00000377399 XRN1Q8IZH2 1706 aaKnown RBP27.01■■□□□ 1.91
SPSB1-203ENST00000377399 TECPR2O15040 1411 aa27■■□□□ 1.91
SPSB1-203ENST00000377399 KCNA6P17658 529 aa27■■□□□ 1.91
SPSB1-203ENST00000377399 HSPA5P11021 654 aaKnown RBP26.99■■□□□ 1.91
SPSB1-203ENST00000377399 AMOTL2Q9Y2J4 779 aa26.99■■□□□ 1.91
SPSB1-203ENST00000377399 NWD1Q149M9 1564 aa26.99■■□□□ 1.91
SPSB1-203ENST00000377399 PTCH1Q13635 1447 aa26.97■■□□□ 1.91
SPSB1-203ENST00000377399 XIRP1Q702N8 1843 aaKnown RBP26.97■■□□□ 1.91
SPSB1-203ENST00000377399 CENPJQ9HC77 1338 aaPredicted RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms