RNA–Protein interactions for RNA: ENST00000377351.8

UBA1-203, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-203ENST00000377351 USP47Q96K76 1375 aa12.51□□□□□ -0.41
UBA1-203ENST00000377351 IPO4Q8TEX9 1081 aaKnown RBP12.51□□□□□ -0.41
UBA1-203ENST00000377351 IQGAP3Q86VI3 1631 aa12.51□□□□□ -0.41
UBA1-203ENST00000377351 KIF7Q2M1P5 1343 aa12.5□□□□□ -0.41
UBA1-203ENST00000377351 UHRF1BP1Q6BDS2 1440 aa12.5□□□□□ -0.41
UBA1-203ENST00000377351 ZFYVE16Q7Z3T8 1539 aa12.5□□□□□ -0.41
UBA1-203ENST00000377351 HOMEZQ8IX15 550 aa12.5□□□□□ -0.41
UBA1-203ENST00000377351 PLA2R1Q13018 1463 aa12.5□□□□□ -0.41
UBA1-203ENST00000377351 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
UBA1-203ENST00000377351 KIF3BO15066 747 aa12.49□□□□□ -0.41
UBA1-203ENST00000377351 ANP32BQ92688 251 aaKnown RBP12.49□□□□□ -0.41
UBA1-203ENST00000377351 CNTLNQ9NXG0 1405 aa12.48□□□□□ -0.41
UBA1-203ENST00000377351 ATP7AQ04656 1500 aa12.48□□□□□ -0.41
UBA1-203ENST00000377351 FAM9BQ8IZU0 186 aa12.48□□□□□ -0.41
UBA1-203ENST00000377351 CD109Q6YHK3 1445 aa12.48□□□□□ -0.41
UBA1-203ENST00000377351 MAGI2Q86UL8 1455 aa12.47□□□□□ -0.41
UBA1-203ENST00000377351 RALGAPBQ86X10 1494 aa12.47□□□□□ -0.41
UBA1-203ENST00000377351 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.41
UBA1-203ENST00000377351 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.41
UBA1-203ENST00000377351 RRAGDQ9NQL2 400 aaPredicted RBP12.46□□□□□ -0.41
UBA1-203ENST00000377351 ROCK2O75116 1388 aaKnown RBP12.46□□□□□ -0.41
UBA1-203ENST00000377351 KANK1Q14678 1352 aa12.46□□□□□ -0.42
UBA1-203ENST00000377351 STAC3Q96MF2 364 aa12.45□□□□□ -0.42
UBA1-203ENST00000377351 INO80Q9ULG1 1556 aaPredicted RBP12.44□□□□□ -0.42
UBA1-203ENST00000377351 DHX29Q7Z478 1369 aaKnown RBP12.44□□□□□ -0.42
UBA1-203ENST00000377351 ST20-MTHFSA0A0A6YYL1 179 aa12.44□□□□□ -0.42
UBA1-203ENST00000377351 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
UBA1-203ENST00000377351 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
UBA1-203ENST00000377351 E9PSI1 815 aa12.43□□□□□ -0.42
UBA1-203ENST00000377351 NFKBIBQ15653 356 aa12.43□□□□□ -0.42
UBA1-203ENST00000377351 PDCL3Q9H2J4 239 aa12.43□□□□□ -0.42
UBA1-203ENST00000377351 KDM5CP41229 1560 aa12.43□□□□□ -0.42
UBA1-203ENST00000377351 FTSJ3Q8IY81 847 aaKnown RBP12.43□□□□□ -0.42
UBA1-203ENST00000377351 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
UBA1-203ENST00000377351 PRAG1Q86YV5 1406 aa12.43□□□□□ -0.42
UBA1-203ENST00000377351 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
UBA1-203ENST00000377351 ATP10AO60312 1499 aa12.42□□□□□ -0.42
UBA1-203ENST00000377351 A2MP01023 1474 aa12.42□□□□□ -0.42
UBA1-203ENST00000377351 ZNF518AQ6AHZ1 1483 aa12.42□□□□□ -0.42
UBA1-203ENST00000377351 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
UBA1-203ENST00000377351 BCORL1Q5H9F3 1711 aa12.41□□□□□ -0.42
UBA1-203ENST00000377351 SECISBP2LQ93073 1101 aaKnown RBP12.41□□□□□ -0.42
UBA1-203ENST00000377351 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
UBA1-203ENST00000377351 E9PCH4 1651 aa12.4□□□□□ -0.42
UBA1-203ENST00000377351 POLR1AO95602 1720 aaPredicted RBP12.4□□□□□ -0.42
UBA1-203ENST00000377351 FAM13BQ9NYF5 915 aa12.4□□□□□ -0.42
UBA1-203ENST00000377351 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
UBA1-203ENST00000377351 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
UBA1-203ENST00000377351 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
UBA1-203ENST00000377351 PRDM4Q9UKN5 801 aa12.39□□□□□ -0.43
UBA1-203ENST00000377351 KIDINS220Q9ULH0 1771 aa12.39□□□□□ -0.43
UBA1-203ENST00000377351 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
UBA1-203ENST00000377351 DEPDC5O75140 1603 aa12.38□□□□□ -0.43
UBA1-203ENST00000377351 CFAP74Q9C0B2 1584 aa12.38□□□□□ -0.43
UBA1-203ENST00000377351 POGZQ7Z3K3 1410 aa12.38□□□□□ -0.43
UBA1-203ENST00000377351 APPP05067 770 aa12.38□□□□□ -0.43
UBA1-203ENST00000377351 GGT6Q6P531 493 aa12.38□□□□□ -0.43
UBA1-203ENST00000377351 TRPM1Q7Z4N2 1603 aa12.37□□□□□ -0.43
UBA1-203ENST00000377351 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
UBA1-203ENST00000377351 TET3O43151 1660 aa12.37□□□□□ -0.43
UBA1-203ENST00000377351 PATL2C9JE40 543 aaKnown RBP12.36□□□□□ -0.43
UBA1-203ENST00000377351 PTPRTO14522 1441 aa12.36□□□□□ -0.43
UBA1-203ENST00000377351 TRPM2O94759 1503 aa12.36□□□□□ -0.43
UBA1-203ENST00000377351 EIF2AK4Q9P2K8 1649 aaKnown RBP12.36□□□□□ -0.43
UBA1-203ENST00000377351 AEBP1Q8IUX7 1158 aa12.35□□□□□ -0.43
UBA1-203ENST00000377351 PDE4AP27815 886 aa12.35□□□□□ -0.43
UBA1-203ENST00000377351 SPHKAPQ2M3C7 1700 aa12.35□□□□□ -0.43
UBA1-203ENST00000377351 WWC1Q8IX03 1113 aa12.35□□□□□ -0.43
UBA1-203ENST00000377351 VWDEQ8N2E2 1590 aa12.34□□□□□ -0.43
UBA1-203ENST00000377351 CNPY4Q8N129 248 aa12.34□□□□□ -0.43
UBA1-203ENST00000377351 TRIM44Q96DX7 344 aaPredicted RBP12.34□□□□□ -0.43
UBA1-203ENST00000377351 PRDM15P57071 1507 aaPredicted RBP12.34□□□□□ -0.43
UBA1-203ENST00000377351 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
UBA1-203ENST00000377351 GPRASP1Q5JY77 1395 aa12.34□□□□□ -0.43
UBA1-203ENST00000377351 NEO1Q92859 1461 aa12.33□□□□□ -0.43
UBA1-203ENST00000377351 MROH1Q8NDA8 1641 aa12.33□□□□□ -0.44
UBA1-203ENST00000377351 SKAP1Q86WV1 359 aa12.33□□□□□ -0.44
UBA1-203ENST00000377351 CLTCL1P53675 1640 aa12.33□□□□□ -0.44
UBA1-203ENST00000377351 L1TD1Q5T7N2 865 aaKnown RBP12.32□□□□□ -0.44
UBA1-203ENST00000377351 DDRGK1Q96HY6 314 aa12.32□□□□□ -0.44
UBA1-203ENST00000377351 HECW2Q9P2P5 1572 aa12.32□□□□□ -0.44
UBA1-203ENST00000377351 FAM69CQ0P6D2 419 aa12.32□□□□□ -0.44
UBA1-203ENST00000377351 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
UBA1-203ENST00000377351 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
UBA1-203ENST00000377351 RIMBP3CA6NJZ7 1639 aa12.32□□□□□ -0.44
UBA1-203ENST00000377351 RIMBP3BA6NNM3 1639 aa12.32□□□□□ -0.44
UBA1-203ENST00000377351 RIMBP3Q9UFD9 1639 aa12.32□□□□□ -0.44
UBA1-203ENST00000377351 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
UBA1-203ENST00000377351 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
UBA1-203ENST00000377351 CEP152O94986 1710 aa12.3□□□□□ -0.44
UBA1-203ENST00000377351 FRAT2O75474 233 aaPredicted RBP12.3□□□□□ -0.44
UBA1-203ENST00000377351 UGGT1Q9NYU2 1555 aa12.3□□□□□ -0.44
UBA1-203ENST00000377351 EFCAB6Q5THR3 1501 aa12.29□□□□□ -0.44
UBA1-203ENST00000377351 CFAP65Q6ZU64 1925 aaKnown RBP12.29□□□□□ -0.44
UBA1-203ENST00000377351 TESK2Q96S53 571 aa12.29□□□□□ -0.44
UBA1-203ENST00000377351 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
UBA1-203ENST00000377351 FRMPD1Q5SYB0 1578 aa12.28□□□□□ -0.44
UBA1-203ENST00000377351 TMF1P82094 1093 aa12.28□□□□□ -0.44
UBA1-203ENST00000377351 SMG6Q86US8 1419 aaKnown RBP12.28□□□□□ -0.44
UBA1-203ENST00000377351 ABCA6Q8N139 1617 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms