RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 SYNMO15061 1565 aa24.01■■□□□ 1.43
NKX2-2-201ENST00000377142 DISP3Q9P2K9 1392 aa24■■□□□ 1.43
NKX2-2-201ENST00000377142 TMF1P82094 1093 aa24■■□□□ 1.43
NKX2-2-201ENST00000377142 MRS2Q9HD23 443 aa24■■□□□ 1.43
NKX2-2-201ENST00000377142 EIF3AQ14152 1382 aaKnown RBP24■■□□□ 1.43
NKX2-2-201ENST00000377142 KTN1Q86UP2 1357 aaKnown RBP24■■□□□ 1.43
NKX2-2-201ENST00000377142 CCDC184Q52MB2 194 aa23.98■■□□□ 1.43
NKX2-2-201ENST00000377142 AGLP35573 1532 aa23.98■■□□□ 1.43
NKX2-2-201ENST00000377142 SETBP1Q9Y6X0 1596 aa23.96■■□□□ 1.43
NKX2-2-201ENST00000377142 ADGRF5Q8IZF2 1346 aa23.95■■□□□ 1.42
NKX2-2-201ENST00000377142 PREX1Q8TCU6 1659 aa23.95■■□□□ 1.42
NKX2-2-201ENST00000377142 RPGRIP1LQ68CZ1 1315 aa23.94■■□□□ 1.42
NKX2-2-201ENST00000377142 HNRNPUQ00839 825 aaKnown RBP eCLIP23.93■■□□□ 1.42
NKX2-2-201ENST00000377142 CHGAP10645 457 aaKnown RBP23.92■■□□□ 1.42
NKX2-2-201ENST00000377142 MYO3AQ8NEV4 1616 aa23.92■■□□□ 1.42
NKX2-2-201ENST00000377142 PIK3C2GO75747 1445 aa23.92■■□□□ 1.42
NKX2-2-201ENST00000377142 ARHGEF40Q8TER5 1519 aa23.91■■□□□ 1.42
NKX2-2-201ENST00000377142 RALBP1Q15311 655 aa23.9■■□□□ 1.42
NKX2-2-201ENST00000377142 CDCA8Q53HL2 280 aa23.89■■□□□ 1.41
NKX2-2-201ENST00000377142 CFAP70Q5T0N1 1121 aa23.89■■□□□ 1.41
NKX2-2-201ENST00000377142 NEXMIFQ5QGS0 1516 aa23.88■■□□□ 1.41
NKX2-2-201ENST00000377142 KDM5AP29375 1690 aaKnown RBP23.87■■□□□ 1.41
NKX2-2-201ENST00000377142 SLC24A1O60721 1099 aa23.87■■□□□ 1.41
NKX2-2-201ENST00000377142 FAM9BQ8IZU0 186 aa23.87■■□□□ 1.41
NKX2-2-201ENST00000377142 PPP6R1Q9UPN7 881 aa23.87■■□□□ 1.41
NKX2-2-201ENST00000377142 SLC52A1Q9NWF4 448 aa23.86■■□□□ 1.41
NKX2-2-201ENST00000377142 MYBBP1AQ9BQG0 1328 aaKnown RBP23.86■■□□□ 1.41
NKX2-2-201ENST00000377142 PARD3Q8TEW0 1356 aa23.84■■□□□ 1.41
NKX2-2-201ENST00000377142 PER1O15534 1290 aaPredicted RBP23.84■■□□□ 1.41
NKX2-2-201ENST00000377142 MYOM1P52179 1685 aa23.84■■□□□ 1.41
NKX2-2-201ENST00000377142 BRD4O60885 1362 aaPredicted RBP23.83■■□□□ 1.41
NKX2-2-201ENST00000377142 CNGB1Q14028 1251 aaPredicted RBP23.83■■□□□ 1.41
NKX2-2-201ENST00000377142 ADGRB1O14514 1584 aa23.83■■□□□ 1.4
NKX2-2-201ENST00000377142 TMEM131LA2VDJ0 1609 aa23.82■■□□□ 1.4
NKX2-2-201ENST00000377142 CLTCQ00610 1675 aaKnown RBP23.82■■□□□ 1.4
NKX2-2-201ENST00000377142 ERVK-7P63135 1459 aa23.82■■□□□ 1.4
NKX2-2-201ENST00000377142 SBNO2Q9Y2G9 1366 aa23.82■■□□□ 1.4
NKX2-2-201ENST00000377142 MYO5BQ9ULV0 1848 aa23.81■■□□□ 1.4
NKX2-2-201ENST00000377142 C14orf93Q9H972 538 aaKnown RBP23.8■■□□□ 1.4
NKX2-2-201ENST00000377142 PANK3Q9H999 370 aa23.8■■□□□ 1.4
NKX2-2-201ENST00000377142 ZFYVE9O95405 1425 aa23.79■■□□□ 1.4
NKX2-2-201ENST00000377142 ZBED9Q6R2W3 1325 aa23.79■■□□□ 1.4
NKX2-2-201ENST00000377142 IDI1Q13907 227 aa23.79■■□□□ 1.4
NKX2-2-201ENST00000377142 SUPT16HQ9Y5B9 1047 aaKnown RBP23.79■■□□□ 1.4
NKX2-2-201ENST00000377142 VGFO15240 615 aaPredicted RBP23.78■■□□□ 1.4
NKX2-2-201ENST00000377142 TMC1Q8TDI8 760 aa23.78■■□□□ 1.4
NKX2-2-201ENST00000377142 QRICH2Q9H0J4 1663 aa23.76■■□□□ 1.39
NKX2-2-201ENST00000377142 SPATA31D1Q6ZQQ2 1576 aa23.75■■□□□ 1.39
NKX2-2-201ENST00000377142 NLRP13Q86W25 1043 aa23.74■■□□□ 1.39
NKX2-2-201ENST00000377142 PNISRQ8TF01 805 aaKnown RBP23.74■■□□□ 1.39
NKX2-2-201ENST00000377142 CENPJQ9HC77 1338 aaPredicted RBP23.73■■□□□ 1.39
NKX2-2-201ENST00000377142 LRPPRCP42704 1394 aaKnown RBP23.72■■□□□ 1.39
NKX2-2-201ENST00000377142 ARHGEF28Q8N1W1 1705 aaKnown RBP23.71■■□□□ 1.39
NKX2-2-201ENST00000377142 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
NKX2-2-201ENST00000377142 NEFLP07196 543 aa23.69■■□□□ 1.38
NKX2-2-201ENST00000377142 CC2D1BQ5T0F9 858 aaKnown RBP23.68■■□□□ 1.38
NKX2-2-201ENST00000377142 FBXO31Q5XUX0 539 aaPredicted RBP23.68■■□□□ 1.38
NKX2-2-201ENST00000377142 KNSTRNQ9Y448 316 aa23.68■■□□□ 1.38
NKX2-2-201ENST00000377142 NPC1L1Q9UHC9 1359 aa23.66■■□□□ 1.38
NKX2-2-201ENST00000377142 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
NKX2-2-201ENST00000377142 NUTM2DQ5VT03 806 aaPredicted RBP23.63■■□□□ 1.37
NKX2-2-201ENST00000377142 TMEM132EQ6IEE7 984 aa23.63■■□□□ 1.37
NKX2-2-201ENST00000377142 FKBP8Q14318 412 aa23.62■■□□□ 1.37
NKX2-2-201ENST00000377142 AMER1Q5JTC6 1135 aaPredicted RBP23.62■■□□□ 1.37
NKX2-2-201ENST00000377142 MLECQ14165 292 aa23.61■■□□□ 1.37
NKX2-2-201ENST00000377142 INSRP06213 1382 aa23.6■■□□□ 1.37
NKX2-2-201ENST00000377142 A2ML1A8K2U0 1454 aa23.6■■□□□ 1.37
NKX2-2-201ENST00000377142 STAG3Q9UJ98 1225 aa23.59■■□□□ 1.37
NKX2-2-201ENST00000377142 ESF1Q9H501 851 aaKnown RBP23.58■■□□□ 1.37
NKX2-2-201ENST00000377142 ALKQ9UM73 1620 aa23.57■■□□□ 1.36
NKX2-2-201ENST00000377142 TULP4Q9NRJ4 1543 aa23.55■■□□□ 1.36
NKX2-2-201ENST00000377142 ZMYM3Q14202 1370 aa23.55■■□□□ 1.36
NKX2-2-201ENST00000377142 PUS7Q96PZ0 661 aaKnown RBP23.55■■□□□ 1.36
NKX2-2-201ENST00000377142 SMG6Q86US8 1419 aaKnown RBP23.55■■□□□ 1.36
NKX2-2-201ENST00000377142 RIMS2Q9UQ26 1411 aa23.53■■□□□ 1.36
NKX2-2-201ENST00000377142 USP32Q8NFA0 1604 aa23.52■■□□□ 1.36
NKX2-2-201ENST00000377142 EVC2Q86UK5 1308 aa23.52■■□□□ 1.36
NKX2-2-201ENST00000377142 PTPRMP28827 1452 aa23.52■■□□□ 1.36
NKX2-2-201ENST00000377142 BLMP54132 1417 aaPredicted RBP23.51■■□□□ 1.35
NKX2-2-201ENST00000377142 YTHDC2Q9H6S0 1430 aaKnown RBP23.51■■□□□ 1.35
NKX2-2-201ENST00000377142 PPP2R1AP30153 589 aa23.51■■□□□ 1.35
NKX2-2-201ENST00000377142 SETD1AO15047 1707 aaKnown RBP23.51■■□□□ 1.35
NKX2-2-201ENST00000377142 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
NKX2-2-201ENST00000377142 CARD14Q9BXL6 1004 aa23.47■■□□□ 1.35
NKX2-2-201ENST00000377142 NUDCQ9Y266 331 aa23.47■■□□□ 1.35
NKX2-2-201ENST00000377142 TNRQ92752 1358 aa23.47■■□□□ 1.35
NKX2-2-201ENST00000377142 DLC1Q96QB1 1528 aa23.46■■□□□ 1.35
NKX2-2-201ENST00000377142 NSD3Q9BZ95 1437 aa23.45■■□□□ 1.35
NKX2-2-201ENST00000377142 NINLQ9Y2I6 1382 aa23.44■■□□□ 1.34
NKX2-2-201ENST00000377142 NRXN3Q9Y4C0 1643 aa23.44■■□□□ 1.34
NKX2-2-201ENST00000377142 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.44■■□□□ 1.34
NKX2-2-201ENST00000377142 BCANQ96GW7 911 aa23.44■■□□□ 1.34
NKX2-2-201ENST00000377142 STK26Q9P289 416 aa23.44■■□□□ 1.34
NKX2-2-201ENST00000377142 UBR1Q8IWV7 1749 aa23.43■■□□□ 1.34
NKX2-2-201ENST00000377142 ANKRD36BQ8N2N9 1353 aa23.42■■□□□ 1.34
NKX2-2-201ENST00000377142 ERICH6BQ5W0A0 696 aa23.42■■□□□ 1.34
NKX2-2-201ENST00000377142 SLC12A5Q9H2X9 1139 aa23.41■■□□□ 1.34
NKX2-2-201ENST00000377142 PRAM1Q96QH2 718 aa23.39■■□□□ 1.34
NKX2-2-201ENST00000377142 ATAD2Q6PL18 1390 aa23.38■■□□□ 1.33
NKX2-2-201ENST00000377142 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms