RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 RIMS2Q9UQ26 1411 aa33.44■■■□□ 2.94
YIF1A-202ENST00000376899 ANKRD30BQ9BXX2 1392 aa33.39■■■□□ 2.94
YIF1A-202ENST00000376899 NEXMIFQ5QGS0 1516 aa33.36■■■□□ 2.93
YIF1A-202ENST00000376899 HDGFP51858 240 aaKnown RBP33.35■■■□□ 2.93
YIF1A-202ENST00000376899 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.34■■■□□ 2.93
YIF1A-202ENST00000376899 SPATA31E1Q6ZUB1 1445 aa33.33■■■□□ 2.93
YIF1A-202ENST00000376899 PLEKHG1Q9ULL1 1385 aa33.32■■■□□ 2.92
YIF1A-202ENST00000376899 ZNF326Q5BKZ1 582 aaKnown RBP33.29■■■□□ 2.92
YIF1A-202ENST00000376899 PPLO60437 1756 aa33.29■■■□□ 2.92
YIF1A-202ENST00000376899 LTBP4Q8N2S1 1624 aa33.28■■■□□ 2.92
YIF1A-202ENST00000376899 PPP1R15AO75807 674 aaPredicted RBP33.26■■■□□ 2.91
YIF1A-202ENST00000376899 IFT172Q9UG01 1749 aa33.25■■■□□ 2.91
YIF1A-202ENST00000376899 RPGRIP1LQ68CZ1 1315 aa33.25■■■□□ 2.91
YIF1A-202ENST00000376899 ZNF335Q9H4Z2 1342 aaPredicted RBP33.23■■■□□ 2.91
YIF1A-202ENST00000376899 SETBP1Q9Y6X0 1596 aa33.21■■■□□ 2.91
YIF1A-202ENST00000376899 NRXN3Q9Y4C0 1643 aa33.21■■■□□ 2.91
YIF1A-202ENST00000376899 NUTM2DQ5VT03 806 aaPredicted RBP33.21■■■□□ 2.91
YIF1A-202ENST00000376899 DIP2AQ14689 1571 aa33.21■■■□□ 2.91
YIF1A-202ENST00000376899 DHX57Q6P158 1386 aaKnown RBP33.21■■■□□ 2.91
YIF1A-202ENST00000376899 ADAMTS13Q76LX8 1427 aa33.19■■■□□ 2.9
YIF1A-202ENST00000376899 STRCP1A6NGW2 1772 aa33.18■■■□□ 2.9
YIF1A-202ENST00000376899 PCGF6Q9BYE7 350 aa33.16■■■□□ 2.9
YIF1A-202ENST00000376899 CPS1P31327 1500 aa33.15■■■□□ 2.9
YIF1A-202ENST00000376899 SLC26A8Q96RN1 970 aa33.15■■■□□ 2.9
YIF1A-202ENST00000376899 VGFO15240 615 aaPredicted RBP33.13■■■□□ 2.89
YIF1A-202ENST00000376899 RGL3Q3MIN7 710 aa33.13■■■□□ 2.89
YIF1A-202ENST00000376899 TBX22Q9Y458 520 aa33.12■■■□□ 2.89
YIF1A-202ENST00000376899 NWD1Q149M9 1564 aa33.12■■■□□ 2.89
YIF1A-202ENST00000376899 BCANQ96GW7 911 aa33.11■■■□□ 2.89
YIF1A-202ENST00000376899 CHD2O14647 1828 aaKnown RBP33.09■■■□□ 2.89
YIF1A-202ENST00000376899 SETD1AO15047 1707 aaKnown RBP33.08■■■□□ 2.89
YIF1A-202ENST00000376899 MYOM2P54296 1465 aa33.07■■■□□ 2.88
YIF1A-202ENST00000376899 IQSEC2Q5JU85 1478 aa33.07■■■□□ 2.88
YIF1A-202ENST00000376899 CERKQ8TCT0 537 aa33.07■■■□□ 2.88
YIF1A-202ENST00000376899 SENP3Q9H4L4 574 aaPredicted RBP33.06■■■□□ 2.88
YIF1A-202ENST00000376899 PIK3R4Q99570 1358 aa33.06■■■□□ 2.88
YIF1A-202ENST00000376899 KCNA6P17658 529 aa33.03■■■□□ 2.88
YIF1A-202ENST00000376899 NRXN1Q9ULB1 1477 aa33.03■■■□□ 2.88
YIF1A-202ENST00000376899 ADGRF5Q8IZF2 1346 aa33.02■■■□□ 2.88
YIF1A-202ENST00000376899 ALKQ9UM73 1620 aa33.02■■■□□ 2.88
YIF1A-202ENST00000376899 NKTRP30414 1462 aaKnown RBP33■■■□□ 2.87
YIF1A-202ENST00000376899 PIK3C2GO75747 1445 aa33■■■□□ 2.87
YIF1A-202ENST00000376899 LRRC7Q96NW7 1537 aa32.99■■■□□ 2.87
YIF1A-202ENST00000376899 XRN1Q8IZH2 1706 aaKnown RBP32.97■■■□□ 2.87
YIF1A-202ENST00000376899 PTPRUQ92729 1446 aa32.95■■■□□ 2.87
YIF1A-202ENST00000376899 XIRP1Q702N8 1843 aaKnown RBP32.95■■■□□ 2.86
YIF1A-202ENST00000376899 METP08581 1390 aa32.95■■■□□ 2.86
YIF1A-202ENST00000376899 STAC3Q96MF2 364 aa32.93■■■□□ 2.86
YIF1A-202ENST00000376899 LAMC1P11047 1609 aa32.92■■■□□ 2.86
YIF1A-202ENST00000376899 SIN3AQ96ST3 1273 aa32.92■■■□□ 2.86
YIF1A-202ENST00000376899 DCAF11Q8TEB1 546 aa32.89■■■□□ 2.86
YIF1A-202ENST00000376899 ASXL1Q8IXJ9 1541 aa32.87■■■□□ 2.85
YIF1A-202ENST00000376899 PRAG1Q86YV5 1406 aa32.87■■■□□ 2.85
YIF1A-202ENST00000376899 AMOTL2Q9Y2J4 779 aa32.85■■■□□ 2.85
YIF1A-202ENST00000376899 C14orf93Q9H972 538 aaKnown RBP32.83■■■□□ 2.85
YIF1A-202ENST00000376899 TMEM94Q12767 1356 aa32.83■■■□□ 2.85
YIF1A-202ENST00000376899 KDM2AQ9Y2K7 1162 aa32.82■■■□□ 2.84
YIF1A-202ENST00000376899 NEUROD1Q13562 356 aa32.81■■■□□ 2.84
YIF1A-202ENST00000376899 PROSER2Q86WR7 435 aaPredicted RBP32.81■■■□□ 2.84
YIF1A-202ENST00000376899 NCOA3Q9Y6Q9 1424 aa32.8■■■□□ 2.84
YIF1A-202ENST00000376899 KNDC1Q76NI1 1749 aa32.79■■■□□ 2.84
YIF1A-202ENST00000376899 PTCH1Q13635 1447 aa32.78■■■□□ 2.84
YIF1A-202ENST00000376899 FBXO41Q8TF61 875 aa32.78■■■□□ 2.84
YIF1A-202ENST00000376899 L3MBTL2Q969R5 705 aa32.77■■■□□ 2.84
YIF1A-202ENST00000376899 CFAP70Q5T0N1 1121 aa32.76■■■□□ 2.83
YIF1A-202ENST00000376899 KIAA1210Q9ULL0 1709 aa32.76■■■□□ 2.83
YIF1A-202ENST00000376899 ADGRB1O14514 1584 aa32.75■■■□□ 2.83
YIF1A-202ENST00000376899 TECPR2O15040 1411 aa32.75■■■□□ 2.83
YIF1A-202ENST00000376899 CLSPNQ9HAW4 1339 aa32.75■■■□□ 2.83
YIF1A-202ENST00000376899 LRPPRCP42704 1394 aaKnown RBP32.74■■■□□ 2.83
YIF1A-202ENST00000376899 YTHDC2Q9H6S0 1430 aaKnown RBP32.71■■■□□ 2.83
YIF1A-202ENST00000376899 ABCC11Q96J66 1382 aa32.7■■■□□ 2.83
YIF1A-202ENST00000376899 TMEM132EQ6IEE7 984 aa32.7■■■□□ 2.83
YIF1A-202ENST00000376899 RBM33Q96EV2 1170 aaKnown RBP32.7■■■□□ 2.83
YIF1A-202ENST00000376899 ROBO2Q9HCK4 1378 aa32.7■■■□□ 2.82
YIF1A-202ENST00000376899 UBAP1LF5GYI3 381 aa32.66■■■□□ 2.82
YIF1A-202ENST00000376899 MSH6P52701 1360 aa32.66■■■□□ 2.82
YIF1A-202ENST00000376899 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.65■■■□□ 2.82
YIF1A-202ENST00000376899 TONSLQ96HA7 1378 aa32.65■■■□□ 2.82
YIF1A-202ENST00000376899 NALCNQ8IZF0 1738 aa32.65■■■□□ 2.82
YIF1A-202ENST00000376899 TOM1O60784 492 aa32.64■■■□□ 2.82
YIF1A-202ENST00000376899 DLC1Q96QB1 1528 aa32.63■■■□□ 2.81
YIF1A-202ENST00000376899 ADGRL3Q9HAR2 1447 aa32.62■■■□□ 2.81
YIF1A-202ENST00000376899 STK26Q9P289 416 aa32.61■■■□□ 2.81
YIF1A-202ENST00000376899 TRPM1Q7Z4N2 1603 aa32.61■■■□□ 2.81
YIF1A-202ENST00000376899 DCCP43146 1447 aa32.6■■■□□ 2.81
YIF1A-202ENST00000376899 FAM135BQ49AJ0 1406 aa32.6■■■□□ 2.81
YIF1A-202ENST00000376899 ILDR1Q86SU0 546 aaPredicted RBP32.6■■■□□ 2.81
YIF1A-202ENST00000376899 SIRT1Q96EB6 747 aa32.6■■■□□ 2.81
YIF1A-202ENST00000376899 C19orf44Q9H6X5 657 aa32.59■■■□□ 2.81
YIF1A-202ENST00000376899 C14orf37Q86TY3 774 aa32.56■■■□□ 2.8
YIF1A-202ENST00000376899 CCER1Q8TC90 406 aaPredicted RBP32.55■■■□□ 2.8
YIF1A-202ENST00000376899 ARHGEF28Q8N1W1 1705 aaKnown RBP32.54■■■□□ 2.8
YIF1A-202ENST00000376899 PLEKHH1Q9ULM0 1364 aa32.52■■■□□ 2.8
YIF1A-202ENST00000376899 WAPLQ7Z5K2 1190 aa32.51■■■□□ 2.79
YIF1A-202ENST00000376899 CADPS2Q86UW7 1296 aa32.51■■■□□ 2.79
YIF1A-202ENST00000376899 NBPF1Q3BBV0 1214 aa32.5■■■□□ 2.79
YIF1A-202ENST00000376899 NBPF8Q3BBV2 869 aa32.5■■■□□ 2.79
YIF1A-202ENST00000376899 CDC42BPGQ6DT37 1551 aa32.49■■■□□ 2.79
YIF1A-202ENST00000376899 TIMELESSQ9UNS1 1208 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms