RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 RIMBP3Q9UFD9 1639 aa29.51■■■□□ 2.31
RNF39-202ENST00000376751 TMC1Q8TDI8 760 aa29.5■■■□□ 2.31
RNF39-202ENST00000376751 GGT6Q6P531 493 aa29.5■■■□□ 2.31
RNF39-202ENST00000376751 CYB5RLQ6IPT4 315 aa29.48■■■□□ 2.31
RNF39-202ENST00000376751 ADGRF5Q8IZF2 1346 aa29.48■■■□□ 2.31
RNF39-202ENST00000376751 GLI2P10070 1586 aa29.47■■■□□ 2.31
RNF39-202ENST00000376751 CAMSAP1Q5T5Y3 1602 aa29.47■■■□□ 2.31
RNF39-202ENST00000376751 NRXN1Q9ULB1 1477 aa29.46■■■□□ 2.31
RNF39-202ENST00000376751 LRPPRCP42704 1394 aaKnown RBP29.46■■■□□ 2.31
RNF39-202ENST00000376751 PANK3Q9H999 370 aa29.46■■■□□ 2.31
RNF39-202ENST00000376751 SIGLEC1Q9BZZ2 1709 aa29.45■■■□□ 2.31
RNF39-202ENST00000376751 CFAP70Q5T0N1 1121 aa29.43■■■□□ 2.3
RNF39-202ENST00000376751 PPLO60437 1756 aa29.42■■■□□ 2.3
RNF39-202ENST00000376751 NOS1P29475 1434 aa29.41■■■□□ 2.3
RNF39-202ENST00000376751 YEATS2Q9ULM3 1422 aa29.41■■■□□ 2.3
RNF39-202ENST00000376751 MYOM1P52179 1685 aa29.41■■■□□ 2.3
RNF39-202ENST00000376751 IRX6P78412 446 aaPredicted RBP29.4■■■□□ 2.3
RNF39-202ENST00000376751 WASHC2CQ9Y4E1 1318 aa29.4■■■□□ 2.3
RNF39-202ENST00000376751 NLRP13Q86W25 1043 aa29.39■■■□□ 2.3
RNF39-202ENST00000376751 EIF3AQ14152 1382 aaKnown RBP29.39■■■□□ 2.29
RNF39-202ENST00000376751 SYNMO15061 1565 aa29.39■■■□□ 2.29
RNF39-202ENST00000376751 CC2D1BQ5T0F9 858 aaKnown RBP29.37■■■□□ 2.29
RNF39-202ENST00000376751 SMG6Q86US8 1419 aaKnown RBP29.36■■■□□ 2.29
RNF39-202ENST00000376751 DIP2BQ9P265 1576 aa29.36■■■□□ 2.29
RNF39-202ENST00000376751 PIK3C2BO00750 1634 aa29.35■■■□□ 2.29
RNF39-202ENST00000376751 SENP3-EIF4A1A0A087X0R7 540 aa29.35■■■□□ 2.29
RNF39-202ENST00000376751 CHGAP10645 457 aaKnown RBP29.35■■■□□ 2.29
RNF39-202ENST00000376751 KDM5AP29375 1690 aaKnown RBP29.33■■■□□ 2.29
RNF39-202ENST00000376751 ZC3H13Q5T200 1668 aaKnown RBP29.33■■■□□ 2.29
RNF39-202ENST00000376751 MYO3AQ8NEV4 1616 aa29.32■■■□□ 2.28
RNF39-202ENST00000376751 SETBP1Q9Y6X0 1596 aa29.31■■■□□ 2.28
RNF39-202ENST00000376751 PIK3C2GO75747 1445 aa29.3■■■□□ 2.28
RNF39-202ENST00000376751 TSHZ2Q9NRE2 1034 aa29.3■■■□□ 2.28
RNF39-202ENST00000376751 ZMYM4Q5VZL5 1548 aa29.3■■■□□ 2.28
RNF39-202ENST00000376751 ERVK-7P63135 1459 aa29.3■■■□□ 2.28
RNF39-202ENST00000376751 CDCA8Q53HL2 280 aa29.29■■■□□ 2.28
RNF39-202ENST00000376751 TSPOAP1O95153 1857 aa29.27■■■□□ 2.28
RNF39-202ENST00000376751 ARHGAP31Q2M1Z3 1444 aa29.27■■■□□ 2.28
RNF39-202ENST00000376751 FAM69CQ0P6D2 419 aa29.26■■■□□ 2.28
RNF39-202ENST00000376751 NUDCQ9Y266 331 aa29.26■■■□□ 2.27
RNF39-202ENST00000376751 ADGRB1O14514 1584 aa29.24■■■□□ 2.27
RNF39-202ENST00000376751 AMER1Q5JTC6 1135 aaPredicted RBP29.22■■■□□ 2.27
RNF39-202ENST00000376751 NEXMIFQ5QGS0 1516 aa29.22■■■□□ 2.27
RNF39-202ENST00000376751 RPGRIP1LQ68CZ1 1315 aa29.22■■■□□ 2.27
RNF39-202ENST00000376751 KNSTRNQ9Y448 316 aa29.21■■■□□ 2.27
RNF39-202ENST00000376751 ASXL1Q8IXJ9 1541 aa29.21■■■□□ 2.27
RNF39-202ENST00000376751 C14orf93Q9H972 538 aaKnown RBP29.2■■■□□ 2.26
RNF39-202ENST00000376751 ERICH6BQ5W0A0 696 aa29.19■■■□□ 2.26
RNF39-202ENST00000376751 PREX1Q8TCU6 1659 aa29.18■■■□□ 2.26
RNF39-202ENST00000376751 SBNO2Q9Y2G9 1366 aa29.18■■■□□ 2.26
RNF39-202ENST00000376751 QRICH2Q9H0J4 1663 aa29.17■■■□□ 2.26
RNF39-202ENST00000376751 MYO5BQ9ULV0 1848 aa29.16■■■□□ 2.26
RNF39-202ENST00000376751 BLMP54132 1417 aaPredicted RBP29.16■■■□□ 2.26
RNF39-202ENST00000376751 CENPJQ9HC77 1338 aaPredicted RBP29.14■■■□□ 2.26
RNF39-202ENST00000376751 INSRP06213 1382 aa29.13■■■□□ 2.25
RNF39-202ENST00000376751 PPP2R1AP30153 589 aa29.13■■■□□ 2.25
RNF39-202ENST00000376751 RNF123Q5XPI4 1314 aa29.12■■■□□ 2.25
RNF39-202ENST00000376751 TRAK1Q9UPV9 953 aa29.12■■■□□ 2.25
RNF39-202ENST00000376751 NPC1L1Q9UHC9 1359 aa29.12■■■□□ 2.25
RNF39-202ENST00000376751 SLC24A1O60721 1099 aa29.12■■■□□ 2.25
RNF39-202ENST00000376751 IDI1Q13907 227 aa29.12■■■□□ 2.25
RNF39-202ENST00000376751 NUTM2DQ5VT03 806 aaPredicted RBP29.12■■■□□ 2.25
RNF39-202ENST00000376751 TMEM132EQ6IEE7 984 aa29.12■■■□□ 2.25
RNF39-202ENST00000376751 PPP4R2Q9NY27 417 aa29.1■■■□□ 2.25
RNF39-202ENST00000376751 TMEM131LA2VDJ0 1609 aa29.08■■■□□ 2.25
RNF39-202ENST00000376751 REREQ9P2R6 1566 aa29.08■■■□□ 2.25
RNF39-202ENST00000376751 ARHGEF28Q8N1W1 1705 aaKnown RBP29.07■■■□□ 2.24
RNF39-202ENST00000376751 SALL2Q9Y467 1007 aaPredicted RBP29.06■■■□□ 2.24
RNF39-202ENST00000376751 CARD14Q9BXL6 1004 aa29.05■■■□□ 2.24
RNF39-202ENST00000376751 SLC52A1Q9NWF4 448 aa29.04■■■□□ 2.24
RNF39-202ENST00000376751 VGFO15240 615 aaPredicted RBP29.04■■■□□ 2.24
RNF39-202ENST00000376751 AGLP35573 1532 aa29.03■■■□□ 2.24
RNF39-202ENST00000376751 KIF13AQ9H1H9 1805 aa29.03■■■□□ 2.24
RNF39-202ENST00000376751 ZFYVE9O95405 1425 aa29.02■■■□□ 2.24
RNF39-202ENST00000376751 FBXO31Q5XUX0 539 aaPredicted RBP29.01■■■□□ 2.23
RNF39-202ENST00000376751 ADAMTS8Q9UP79 889 aa28.99■■■□□ 2.23
RNF39-202ENST00000376751 CLTCQ00610 1675 aaKnown RBP28.99■■■□□ 2.23
RNF39-202ENST00000376751 TULP4Q9NRJ4 1543 aa28.97■■■□□ 2.23
RNF39-202ENST00000376751 PDE3BQ13370 1112 aa28.97■■■□□ 2.23
RNF39-202ENST00000376751 B4GALNT3Q6L9W6 998 aa28.96■■■□□ 2.23
RNF39-202ENST00000376751 CDCA7LQ96GN5 454 aa28.95■■■□□ 2.22
RNF39-202ENST00000376751 ARHGEF40Q8TER5 1519 aa28.93■■■□□ 2.22
RNF39-202ENST00000376751 NSD3Q9BZ95 1437 aa28.92■■■□□ 2.22
RNF39-202ENST00000376751 SENP3Q9H4L4 574 aaPredicted RBP28.92■■■□□ 2.22
RNF39-202ENST00000376751 WDR43Q15061 677 aaKnown RBP eCLIP28.91■■■□□ 2.22
RNF39-202ENST00000376751 SLC12A5Q9H2X9 1139 aa28.91■■■□□ 2.22
RNF39-202ENST00000376751 USP32Q8NFA0 1604 aa28.88■■■□□ 2.21
RNF39-202ENST00000376751 RCAN3Q9UKA8 241 aa28.87■■■□□ 2.21
RNF39-202ENST00000376751 SPATA31D1Q6ZQQ2 1576 aa28.87■■■□□ 2.21
RNF39-202ENST00000376751 PPP6R1Q9UPN7 881 aa28.86■■■□□ 2.21
RNF39-202ENST00000376751 PLEKHH1Q9ULM0 1364 aa28.86■■■□□ 2.21
RNF39-202ENST00000376751 RRP1P56182 461 aaKnown RBP28.85■■■□□ 2.21
RNF39-202ENST00000376751 PTPRMP28827 1452 aa28.84■■■□□ 2.21
RNF39-202ENST00000376751 EVC2Q86UK5 1308 aa28.84■■■□□ 2.21
RNF39-202ENST00000376751 STK26Q9P289 416 aa28.83■■■□□ 2.21
RNF39-202ENST00000376751 ALKQ9UM73 1620 aa28.83■■■□□ 2.21
RNF39-202ENST00000376751 SAFB2Q14151 953 aaKnown RBP eCLIP28.81■■■□□ 2.2
RNF39-202ENST00000376751 MLECQ14165 292 aa28.81■■■□□ 2.2
RNF39-202ENST00000376751 PUS7Q96PZ0 661 aaKnown RBP28.81■■■□□ 2.2
RNF39-202ENST00000376751 RBM19Q9Y4C8 960 aaKnown RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms