RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CLTCQ00610 1675 aaKnown RBP24.54■■□□□ 1.52
CTTN-203ENST00000376561 IQGAP1P46940 1657 aa24.53■■□□□ 1.52
CTTN-203ENST00000376561 SLC52A1Q9NWF4 448 aa24.52■■□□□ 1.52
CTTN-203ENST00000376561 POLR3GLQ9BT43 218 aa24.51■■□□□ 1.51
CTTN-203ENST00000376561 RPGRIP1LQ68CZ1 1315 aa24.51■■□□□ 1.51
CTTN-203ENST00000376561 IDI1Q13907 227 aa24.5■■□□□ 1.51
CTTN-203ENST00000376561 MLECQ14165 292 aa24.5■■□□□ 1.51
CTTN-203ENST00000376561 ERVK-7P63135 1459 aa24.49■■□□□ 1.51
CTTN-203ENST00000376561 TESK2Q96S53 571 aa24.49■■□□□ 1.51
CTTN-203ENST00000376561 SCAF11Q99590 1463 aaKnown RBP24.48■■□□□ 1.51
CTTN-203ENST00000376561 TRHP20396 242 aaPredicted RBP24.48■■□□□ 1.51
CTTN-203ENST00000376561 FBXO31Q5XUX0 539 aaPredicted RBP24.47■■□□□ 1.51
CTTN-203ENST00000376561 CFAP70Q5T0N1 1121 aa24.47■■□□□ 1.51
CTTN-203ENST00000376561 NEXMIFQ5QGS0 1516 aa24.44■■□□□ 1.5
CTTN-203ENST00000376561 PIK3C2GO75747 1445 aa24.44■■□□□ 1.5
CTTN-203ENST00000376561 TMEM131LA2VDJ0 1609 aa24.43■■□□□ 1.5
CTTN-203ENST00000376561 MYO5BQ9ULV0 1848 aa24.42■■□□□ 1.5
CTTN-203ENST00000376561 SPATA31D1Q6ZQQ2 1576 aa24.41■■□□□ 1.5
CTTN-203ENST00000376561 PRKRIP1Q9H875 184 aaPredicted RBP24.41■■□□□ 1.5
CTTN-203ENST00000376561 DISP3Q9P2K9 1392 aa24.41■■□□□ 1.5
CTTN-203ENST00000376561 SETBP1Q9Y6X0 1596 aa24.41■■□□□ 1.5
CTTN-203ENST00000376561 EIF3AQ14152 1382 aaKnown RBP24.39■■□□□ 1.5
CTTN-203ENST00000376561 TMF1P82094 1093 aa24.39■■□□□ 1.5
CTTN-203ENST00000376561 VGFO15240 615 aaPredicted RBP24.39■■□□□ 1.49
CTTN-203ENST00000376561 ESF1Q9H501 851 aaKnown RBP24.39■■□□□ 1.49
CTTN-203ENST00000376561 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
CTTN-203ENST00000376561 C14orf93Q9H972 538 aaKnown RBP24.38■■□□□ 1.49
CTTN-203ENST00000376561 ZMYM3Q14202 1370 aa24.36■■□□□ 1.49
CTTN-203ENST00000376561 ZFYVE9O95405 1425 aa24.35■■□□□ 1.49
CTTN-203ENST00000376561 NUTM2DQ5VT03 806 aaPredicted RBP24.34■■□□□ 1.49
CTTN-203ENST00000376561 ADGRB1O14514 1584 aa24.33■■□□□ 1.49
CTTN-203ENST00000376561 MYO3AQ8NEV4 1616 aa24.3■■□□□ 1.48
CTTN-203ENST00000376561 STAG3Q9UJ98 1225 aa24.3■■□□□ 1.48
CTTN-203ENST00000376561 A2ML1A8K2U0 1454 aa24.27■■□□□ 1.48
CTTN-203ENST00000376561 CDCA8Q53HL2 280 aa24.26■■□□□ 1.47
CTTN-203ENST00000376561 TMEM132EQ6IEE7 984 aa24.26■■□□□ 1.47
CTTN-203ENST00000376561 SLC24A1O60721 1099 aa24.26■■□□□ 1.47
CTTN-203ENST00000376561 CCDC184Q52MB2 194 aa24.24■■□□□ 1.47
CTTN-203ENST00000376561 SBNO2Q9Y2G9 1366 aa24.24■■□□□ 1.47
CTTN-203ENST00000376561 TRAK1Q9UPV9 953 aa24.23■■□□□ 1.47
CTTN-203ENST00000376561 CENPJQ9HC77 1338 aaPredicted RBP24.22■■□□□ 1.47
CTTN-203ENST00000376561 PER1O15534 1290 aaPredicted RBP24.22■■□□□ 1.47
CTTN-203ENST00000376561 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
CTTN-203ENST00000376561 TNRQ92752 1358 aa24.21■■□□□ 1.47
CTTN-203ENST00000376561 KDM5AP29375 1690 aaKnown RBP24.2■■□□□ 1.47
CTTN-203ENST00000376561 PANK3Q9H999 370 aa24.19■■□□□ 1.46
CTTN-203ENST00000376561 MRS2Q9HD23 443 aa24.19■■□□□ 1.46
CTTN-203ENST00000376561 QRICH2Q9H0J4 1663 aa24.19■■□□□ 1.46
CTTN-203ENST00000376561 ASXL1Q8IXJ9 1541 aa24.18■■□□□ 1.46
CTTN-203ENST00000376561 KTN1Q86UP2 1357 aaKnown RBP24.18■■□□□ 1.46
CTTN-203ENST00000376561 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
CTTN-203ENST00000376561 ARHGEF28Q8N1W1 1705 aaKnown RBP24.18■■□□□ 1.46
CTTN-203ENST00000376561 MYOM1P52179 1685 aa24.17■■□□□ 1.46
CTTN-203ENST00000376561 SCAF1Q9H7N4 1312 aaKnown RBP24.17■■□□□ 1.46
CTTN-203ENST00000376561 FER1L4A9Z1Z3 1794 aa24.15■■□□□ 1.46
CTTN-203ENST00000376561 ALKQ9UM73 1620 aa24.15■■□□□ 1.46
CTTN-203ENST00000376561 RALBP1Q15311 655 aa24.15■■□□□ 1.46
CTTN-203ENST00000376561 SENP3Q9H4L4 574 aaPredicted RBP24.15■■□□□ 1.46
CTTN-203ENST00000376561 C3P01024 1663 aa24.13■■□□□ 1.45
CTTN-203ENST00000376561 UBR1Q8IWV7 1749 aa24.11■■□□□ 1.45
CTTN-203ENST00000376561 PARD3Q8TEW0 1356 aa24.11■■□□□ 1.45
CTTN-203ENST00000376561 CEBPAP49715 358 aaPredicted RBP24.11■■□□□ 1.45
CTTN-203ENST00000376561 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
CTTN-203ENST00000376561 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.1■■□□□ 1.45
CTTN-203ENST00000376561 YTHDC2Q9H6S0 1430 aaKnown RBP24.09■■□□□ 1.45
CTTN-203ENST00000376561 NLRP1Q9C000 1473 aa24.08■■□□□ 1.45
CTTN-203ENST00000376561 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
CTTN-203ENST00000376561 FAM9BQ8IZU0 186 aa24.07■■□□□ 1.44
CTTN-203ENST00000376561 STK26Q9P289 416 aa24.07■■□□□ 1.44
CTTN-203ENST00000376561 SETD1AO15047 1707 aaKnown RBP24.07■■□□□ 1.44
CTTN-203ENST00000376561 PTPRMP28827 1452 aa24.06■■□□□ 1.44
CTTN-203ENST00000376561 HDGFP51858 240 aaKnown RBP24.05■■□□□ 1.44
CTTN-203ENST00000376561 CC2D1BQ5T0F9 858 aaKnown RBP24.05■■□□□ 1.44
CTTN-203ENST00000376561 KNSTRNQ9Y448 316 aa24.05■■□□□ 1.44
CTTN-203ENST00000376561 NRXN3Q9Y4C0 1643 aa24.05■■□□□ 1.44
CTTN-203ENST00000376561 TMEM2Q9UHN6 1383 aa24.04■■□□□ 1.44
CTTN-203ENST00000376561 HNRNPUQ00839 825 aaKnown RBP eCLIP24.04■■□□□ 1.446e-9■□□□□ 10.5
CTTN-203ENST00000376561 BRD4O60885 1362 aaPredicted RBP24.04■■□□□ 1.44
CTTN-203ENST00000376561 TMC1Q8TDI8 760 aa24.03■■□□□ 1.44
CTTN-203ENST00000376561 TULP4Q9NRJ4 1543 aa24.02■■□□□ 1.44
CTTN-203ENST00000376561 EVC2Q86UK5 1308 aa24.01■■□□□ 1.43
CTTN-203ENST00000376561 AMER1Q5JTC6 1135 aaPredicted RBP24■■□□□ 1.43
CTTN-203ENST00000376561 NLRP13Q86W25 1043 aa24■■□□□ 1.43
CTTN-203ENST00000376561 PUS7Q96PZ0 661 aaKnown RBP24■■□□□ 1.43
CTTN-203ENST00000376561 SAFB2Q14151 953 aaKnown RBP eCLIP23.99■■□□□ 1.433e-7■■□□□ 13.3
CTTN-203ENST00000376561 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
CTTN-203ENST00000376561 PRAM1Q96QH2 718 aa23.99■■□□□ 1.43
CTTN-203ENST00000376561 PNISRQ8TF01 805 aaKnown RBP23.98■■□□□ 1.43
CTTN-203ENST00000376561 LRPPRCP42704 1394 aaKnown RBP23.97■■□□□ 1.43
CTTN-203ENST00000376561 DLC1Q96QB1 1528 aa23.97■■□□□ 1.43
CTTN-203ENST00000376561 POGKQ9P215 609 aa23.96■■□□□ 1.43
CTTN-203ENST00000376561 NPC1L1Q9UHC9 1359 aa23.96■■□□□ 1.43
CTTN-203ENST00000376561 ABCC11Q96J66 1382 aa23.94■■□□□ 1.42
CTTN-203ENST00000376561 CARD14Q9BXL6 1004 aa23.94■■□□□ 1.42
CTTN-203ENST00000376561 RIMS1Q86UR5 1692 aaKnown RBP23.94■■□□□ 1.42
CTTN-203ENST00000376561 METP08581 1390 aa23.94■■□□□ 1.42
CTTN-203ENST00000376561 SLC12A5Q9H2X9 1139 aa23.94■■□□□ 1.42
CTTN-203ENST00000376561 MINK1Q8N4C8 1332 aaPredicted RBP23.92■■□□□ 1.42
CTTN-203ENST00000376561 LTKP29376 864 aa23.92■■□□□ 1.42
CTTN-203ENST00000376561 SLIT1O75093 1534 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms