RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
HSPG2-202ENST00000374676 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
HSPG2-202ENST00000374676 ZFYVE9O95405 1425 aa16.58■□□□□ 0.24
HSPG2-202ENST00000374676 RIMS2Q9UQ26 1411 aa16.58■□□□□ 0.24
HSPG2-202ENST00000374676 POLR1AO95602 1720 aaPredicted RBP16.58■□□□□ 0.24
HSPG2-202ENST00000374676 MED14O60244 1454 aa16.56■□□□□ 0.24
HSPG2-202ENST00000374676 SCAF11Q99590 1463 aaKnown RBP16.56■□□□□ 0.24
HSPG2-202ENST00000374676 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
HSPG2-202ENST00000374676 NEXMIFQ5QGS0 1516 aa16.54■□□□□ 0.24
HSPG2-202ENST00000374676 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
HSPG2-202ENST00000374676 PPLO60437 1756 aa16.53■□□□□ 0.24
HSPG2-202ENST00000374676 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
HSPG2-202ENST00000374676 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
HSPG2-202ENST00000374676 VGFO15240 615 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-202ENST00000374676 PPP1R15AO75807 674 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-202ENST00000374676 PLEKHG1Q9ULL1 1385 aa16.51■□□□□ 0.23
HSPG2-202ENST00000374676 STAC3Q96MF2 364 aa16.5■□□□□ 0.23
HSPG2-202ENST00000374676 IFT172Q9UG01 1749 aa16.5■□□□□ 0.23
HSPG2-202ENST00000374676 IQGAP1P46940 1657 aa16.5■□□□□ 0.23
HSPG2-202ENST00000374676 NUTM2DQ5VT03 806 aaPredicted RBP16.49■□□□□ 0.23
HSPG2-202ENST00000374676 NEUROD1Q13562 356 aa16.48■□□□□ 0.23
HSPG2-202ENST00000374676 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-202ENST00000374676 TBX22Q9Y458 520 aa16.46■□□□□ 0.23
HSPG2-202ENST00000374676 BCANQ96GW7 911 aa16.45■□□□□ 0.22
HSPG2-202ENST00000374676 ADGRF5Q8IZF2 1346 aa16.45■□□□□ 0.22
HSPG2-202ENST00000374676 SETBP1Q9Y6X0 1596 aa16.44■□□□□ 0.22
HSPG2-202ENST00000374676 MYOM2P54296 1465 aa16.44■□□□□ 0.22
HSPG2-202ENST00000374676 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
HSPG2-202ENST00000374676 ADAMTS13Q76LX8 1427 aa16.44■□□□□ 0.22
HSPG2-202ENST00000374676 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
HSPG2-202ENST00000374676 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
HSPG2-202ENST00000374676 NRXN1Q9ULB1 1477 aa16.42■□□□□ 0.22
HSPG2-202ENST00000374676 NRXN3Q9Y4C0 1643 aa16.42■□□□□ 0.22
HSPG2-202ENST00000374676 DIP2AQ14689 1571 aa16.42■□□□□ 0.22
HSPG2-202ENST00000374676 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
HSPG2-202ENST00000374676 PIK3R4Q99570 1358 aa16.39■□□□□ 0.21
HSPG2-202ENST00000374676 PIK3C2GO75747 1445 aa16.39■□□□□ 0.21
HSPG2-202ENST00000374676 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
HSPG2-202ENST00000374676 TIMELESSQ9UNS1 1208 aa16.39■□□□□ 0.21
HSPG2-202ENST00000374676 TONSLQ96HA7 1378 aa16.38■□□□□ 0.21
HSPG2-202ENST00000374676 ALKQ9UM73 1620 aa16.38■□□□□ 0.21
HSPG2-202ENST00000374676 C14orf93Q9H972 538 aaKnown RBP16.38■□□□□ 0.21
HSPG2-202ENST00000374676 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
HSPG2-202ENST00000374676 SETD1AO15047 1707 aaKnown RBP16.37■□□□□ 0.21
HSPG2-202ENST00000374676 KCNA6P17658 529 aa16.37■□□□□ 0.21
HSPG2-202ENST00000374676 ZNF335Q9H4Z2 1342 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-202ENST00000374676 METP08581 1390 aa16.35■□□□□ 0.21
HSPG2-202ENST00000374676 CFAP70Q5T0N1 1121 aa16.34■□□□□ 0.21
HSPG2-202ENST00000374676 PRAG1Q86YV5 1406 aa16.34■□□□□ 0.21
HSPG2-202ENST00000374676 LAMC1P11047 1609 aa16.34■□□□□ 0.21
HSPG2-202ENST00000374676 LTBP4Q8N2S1 1624 aa16.34■□□□□ 0.21
HSPG2-202ENST00000374676 STRCP1A6NGW2 1772 aa16.33■□□□□ 0.21
HSPG2-202ENST00000374676 NWD1Q149M9 1564 aa16.32■□□□□ 0.2
HSPG2-202ENST00000374676 KIAA1210Q9ULL0 1709 aa16.32■□□□□ 0.2
HSPG2-202ENST00000374676 CPS1P31327 1500 aa16.31■□□□□ 0.2
HSPG2-202ENST00000374676 PTPRUQ92729 1446 aa16.31■□□□□ 0.2
HSPG2-202ENST00000374676 AMOTL2Q9Y2J4 779 aa16.31■□□□□ 0.2
HSPG2-202ENST00000374676 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
HSPG2-202ENST00000374676 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
HSPG2-202ENST00000374676 XRN1Q8IZH2 1706 aaKnown RBP16.28■□□□□ 0.2
HSPG2-202ENST00000374676 NBPF8Q3BBV2 869 aa16.28■□□□□ 0.2
HSPG2-202ENST00000374676 ASXL1Q8IXJ9 1541 aa16.28■□□□□ 0.2
HSPG2-202ENST00000374676 LRPPRCP42704 1394 aaKnown RBP16.27■□□□□ 0.2
HSPG2-202ENST00000374676 ABCC11Q96J66 1382 aa16.27■□□□□ 0.2
HSPG2-202ENST00000374676 ADGRB1O14514 1584 aa16.27■□□□□ 0.2
HSPG2-202ENST00000374676 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-202ENST00000374676 YTHDC2Q9H6S0 1430 aaKnown RBP16.27■□□□□ 0.19
HSPG2-202ENST00000374676 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
HSPG2-202ENST00000374676 SIRT1Q96EB6 747 aa16.26■□□□□ 0.19
HSPG2-202ENST00000374676 NBPF1Q3BBV0 1214 aa16.25■□□□□ 0.19
HSPG2-202ENST00000374676 CERKQ8TCT0 537 aa16.25■□□□□ 0.19
HSPG2-202ENST00000374676 TRPM1Q7Z4N2 1603 aa16.25■□□□□ 0.19
HSPG2-202ENST00000374676 TECPR2O15040 1411 aa16.25■□□□□ 0.19
HSPG2-202ENST00000374676 PTCH1Q13635 1447 aa16.24■□□□□ 0.19
HSPG2-202ENST00000374676 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
HSPG2-202ENST00000374676 KNDC1Q76NI1 1749 aa16.24■□□□□ 0.19
HSPG2-202ENST00000374676 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
HSPG2-202ENST00000374676 STK26Q9P289 416 aa16.23■□□□□ 0.19
HSPG2-202ENST00000374676 XIRP1Q702N8 1843 aaKnown RBP16.23■□□□□ 0.19
HSPG2-202ENST00000374676 TMEM94Q12767 1356 aa16.22■□□□□ 0.19
HSPG2-202ENST00000374676 DLC1Q96QB1 1528 aa16.21■□□□□ 0.19
HSPG2-202ENST00000374676 GPRASP1Q5JY77 1395 aa16.21■□□□□ 0.19
HSPG2-202ENST00000374676 ROBO2Q9HCK4 1378 aa16.21■□□□□ 0.19
HSPG2-202ENST00000374676 FAM135BQ49AJ0 1406 aa16.2■□□□□ 0.18
HSPG2-202ENST00000374676 RALGAPBQ86X10 1494 aa16.2■□□□□ 0.18
HSPG2-202ENST00000374676 ROCK2O75116 1388 aaKnown RBP16.19■□□□□ 0.18
HSPG2-202ENST00000374676 TRAK1Q9UPV9 953 aa16.19■□□□□ 0.18
HSPG2-202ENST00000374676 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
HSPG2-202ENST00000374676 RBM33Q96EV2 1170 aaKnown RBP16.17■□□□□ 0.18
HSPG2-202ENST00000374676 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
HSPG2-202ENST00000374676 ARHGEF28Q8N1W1 1705 aaKnown RBP16.15■□□□□ 0.18
HSPG2-202ENST00000374676 PRAM1Q96QH2 718 aa16.15■□□□□ 0.18
HSPG2-202ENST00000374676 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
HSPG2-202ENST00000374676 POGKQ9P215 609 aa16.15■□□□□ 0.18
HSPG2-202ENST00000374676 MSH6P52701 1360 aa16.14■□□□□ 0.17
HSPG2-202ENST00000374676 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
HSPG2-202ENST00000374676 ADGRL3Q9HAR2 1447 aa16.14■□□□□ 0.17
HSPG2-202ENST00000374676 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
HSPG2-202ENST00000374676 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.13■□□□□ 0.17
HSPG2-202ENST00000374676 DCCP43146 1447 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms