RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 POLR1AO95602 1720 aaPredicted RBP20.24■□□□□ 0.83
TCEA3-201ENST00000374601 RIMS2Q9UQ26 1411 aa20.24■□□□□ 0.83
TCEA3-201ENST00000374601 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
TCEA3-201ENST00000374601 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
TCEA3-201ENST00000374601 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
TCEA3-201ENST00000374601 ZEB1P37275 1124 aaPredicted RBP20.23■□□□□ 0.83
TCEA3-201ENST00000374601 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
TCEA3-201ENST00000374601 RPGRIP1LQ68CZ1 1315 aa20.23■□□□□ 0.83
TCEA3-201ENST00000374601 DCAF11Q8TEB1 546 aa20.22■□□□□ 0.83
TCEA3-201ENST00000374601 TRPM1Q7Z4N2 1603 aa20.22■□□□□ 0.83
TCEA3-201ENST00000374601 IQGAP1P46940 1657 aa20.21■□□□□ 0.83
TCEA3-201ENST00000374601 KIAA1210Q9ULL0 1709 aa20.21■□□□□ 0.83
TCEA3-201ENST00000374601 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
TCEA3-201ENST00000374601 PRAG1Q86YV5 1406 aa20.2■□□□□ 0.82
TCEA3-201ENST00000374601 SETD1AO15047 1707 aaKnown RBP20.19■□□□□ 0.82
TCEA3-201ENST00000374601 PPP1R15AO75807 674 aaPredicted RBP20.19■□□□□ 0.82
TCEA3-201ENST00000374601 LAMC1P11047 1609 aa20.18■□□□□ 0.82
TCEA3-201ENST00000374601 ILDR1Q86SU0 546 aaPredicted RBP20.18■□□□□ 0.82
TCEA3-201ENST00000374601 KDM2AQ9Y2K7 1162 aa20.18■□□□□ 0.82
TCEA3-201ENST00000374601 THEMISQ8N1K5 641 aaPredicted RBP20.17■□□□□ 0.82
TCEA3-201ENST00000374601 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
TCEA3-201ENST00000374601 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
TCEA3-201ENST00000374601 SCAF11Q99590 1463 aaKnown RBP20.16■□□□□ 0.82
TCEA3-201ENST00000374601 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
TCEA3-201ENST00000374601 NBPF8Q3BBV2 869 aa20.15■□□□□ 0.82
TCEA3-201ENST00000374601 NUTM2DQ5VT03 806 aaPredicted RBP20.15■□□□□ 0.82
TCEA3-201ENST00000374601 STAC3Q96MF2 364 aa20.14■□□□□ 0.81
TCEA3-201ENST00000374601 STRCQ7RTU9 1775 aa20.13■□□□□ 0.81
TCEA3-201ENST00000374601 RALGAPBQ86X10 1494 aa20.13■□□□□ 0.81
TCEA3-201ENST00000374601 LTKP29376 864 aa20.13■□□□□ 0.81
TCEA3-201ENST00000374601 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
TCEA3-201ENST00000374601 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.11■□□□□ 0.81
TCEA3-201ENST00000374601 PLEKHG1Q9ULL1 1385 aa20.1■□□□□ 0.81
TCEA3-201ENST00000374601 ALKQ9UM73 1620 aa20.1■□□□□ 0.81
TCEA3-201ENST00000374601 ASXL1Q8IXJ9 1541 aa20.1■□□□□ 0.81
TCEA3-201ENST00000374601 TXNDC2Q86VQ3 553 aa20.09■□□□□ 0.81
TCEA3-201ENST00000374601 ADGRB1O14514 1584 aa20.08■□□□□ 0.8
TCEA3-201ENST00000374601 DIP2AQ14689 1571 aa20.08■□□□□ 0.8
TCEA3-201ENST00000374601 MED14O60244 1454 aa20.07■□□□□ 0.8
TCEA3-201ENST00000374601 HDGFP51858 240 aaKnown RBP20.07■□□□□ 0.8
TCEA3-201ENST00000374601 HSPA2P54652 639 aa20.07■□□□□ 0.8
TCEA3-201ENST00000374601 EID1Q9Y6B2 187 aa20.07■□□□□ 0.8
TCEA3-201ENST00000374601 ADAMTS13Q76LX8 1427 aa20.07■□□□□ 0.8
TCEA3-201ENST00000374601 ANKLE2Q86XL3 938 aa20.04■□□□□ 0.8
TCEA3-201ENST00000374601 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
TCEA3-201ENST00000374601 NPHP4O75161 1426 aaPredicted RBP20.03■□□□□ 0.8
TCEA3-201ENST00000374601 GPRASP1Q5JY77 1395 aa20.03■□□□□ 0.8
TCEA3-201ENST00000374601 CFAP70Q5T0N1 1121 aa20.02■□□□□ 0.8
TCEA3-201ENST00000374601 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
TCEA3-201ENST00000374601 KNDC1Q76NI1 1749 aa20.02■□□□□ 0.79
TCEA3-201ENST00000374601 NCKAP5LQ9HCH0 1330 aa20.02■□□□□ 0.79
TCEA3-201ENST00000374601 NBPF1Q3BBV0 1214 aa20.01■□□□□ 0.79
TCEA3-201ENST00000374601 ROCK2O75116 1388 aaKnown RBP20■□□□□ 0.79
TCEA3-201ENST00000374601 ARHGEF28Q8N1W1 1705 aaKnown RBP20■□□□□ 0.79
TCEA3-201ENST00000374601 CHD2O14647 1828 aaKnown RBP19.99■□□□□ 0.79
TCEA3-201ENST00000374601 XRN1Q8IZH2 1706 aaKnown RBP19.99■□□□□ 0.79
TCEA3-201ENST00000374601 METP08581 1390 aa19.96■□□□□ 0.79
TCEA3-201ENST00000374601 BCANQ96GW7 911 aa19.95■□□□□ 0.78
TCEA3-201ENST00000374601 SLC26A8Q96RN1 970 aa19.94■□□□□ 0.78
TCEA3-201ENST00000374601 YTHDC2Q9H6S0 1430 aaKnown RBP19.93■□□□□ 0.78
TCEA3-201ENST00000374601 STRCP1A6NGW2 1772 aa19.93■□□□□ 0.78
TCEA3-201ENST00000374601 NWD1Q149M9 1564 aa19.93■□□□□ 0.78
TCEA3-201ENST00000374601 TMEM132EQ6IEE7 984 aa19.93■□□□□ 0.78
TCEA3-201ENST00000374601 TBX22Q9Y458 520 aa19.93■□□□□ 0.78
TCEA3-201ENST00000374601 CPS1P31327 1500 aa19.92■□□□□ 0.78
TCEA3-201ENST00000374601 CARD11Q9BXL7 1154 aa19.92■□□□□ 0.78
TCEA3-201ENST00000374601 PTPRUQ92729 1446 aa19.92■□□□□ 0.78
TCEA3-201ENST00000374601 QRICH2Q9H0J4 1663 aa19.91■□□□□ 0.78
TCEA3-201ENST00000374601 LRPPRCP42704 1394 aaKnown RBP19.91■□□□□ 0.78
TCEA3-201ENST00000374601 USP47Q96K76 1375 aa19.91■□□□□ 0.78
TCEA3-201ENST00000374601 DLC1Q96QB1 1528 aa19.91■□□□□ 0.78
TCEA3-201ENST00000374601 TECPR2O15040 1411 aa19.9■□□□□ 0.78
TCEA3-201ENST00000374601 PIK3R4Q99570 1358 aa19.89■□□□□ 0.77
TCEA3-201ENST00000374601 ABCC11Q96J66 1382 aa19.85■□□□□ 0.77
TCEA3-201ENST00000374601 STK26Q9P289 416 aa19.84■□□□□ 0.77
TCEA3-201ENST00000374601 PTCH1Q13635 1447 aa19.84■□□□□ 0.77
TCEA3-201ENST00000374601 HSPA5P11021 654 aaKnown RBP19.83■□□□□ 0.77
TCEA3-201ENST00000374601 TRAK1Q9UPV9 953 aa19.83■□□□□ 0.77
TCEA3-201ENST00000374601 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.76
TCEA3-201ENST00000374601 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.76
TCEA3-201ENST00000374601 ROBO2Q9HCK4 1378 aa19.82■□□□□ 0.76
TCEA3-201ENST00000374601 FAM135BQ49AJ0 1406 aa19.81■□□□□ 0.76
TCEA3-201ENST00000374601 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.81■□□□□ 0.76
TCEA3-201ENST00000374601 XIRP1Q702N8 1843 aaKnown RBP19.81■□□□□ 0.76
TCEA3-201ENST00000374601 NKTRP30414 1462 aaKnown RBP19.8■□□□□ 0.76
TCEA3-201ENST00000374601 AMOTL2Q9Y2J4 779 aa19.8■□□□□ 0.76
TCEA3-201ENST00000374601 NALCNQ8IZF0 1738 aa19.79■□□□□ 0.76
TCEA3-201ENST00000374601 PLEKHH1Q9ULM0 1364 aa19.79■□□□□ 0.76
TCEA3-201ENST00000374601 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
TCEA3-201ENST00000374601 KCNA6P17658 529 aa19.78■□□□□ 0.76
TCEA3-201ENST00000374601 HIRIP3Q9BW71 556 aaPredicted RBP19.78■□□□□ 0.76
TCEA3-201ENST00000374601 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
TCEA3-201ENST00000374601 ADGRB2O60241 1585 aa19.77■□□□□ 0.76
TCEA3-201ENST00000374601 CENPJQ9HC77 1338 aaPredicted RBP19.76■□□□□ 0.75
TCEA3-201ENST00000374601 SBNO2Q9Y2G9 1366 aa19.76■□□□□ 0.75
TCEA3-201ENST00000374601 SIRT1Q96EB6 747 aa19.76■□□□□ 0.75
TCEA3-201ENST00000374601 PRAM1Q96QH2 718 aa19.76■□□□□ 0.75
TCEA3-201ENST00000374601 TESK2Q96S53 571 aa19.75■□□□□ 0.75
TCEA3-201ENST00000374601 TULP4Q9NRJ4 1543 aa19.75■□□□□ 0.75
TCEA3-201ENST00000374601 WAPLQ7Z5K2 1190 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 450.9 ms