RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 ERBINQ96RT1 1412 aa11.92□□□□□ -0.5
SP140-202ENST00000373645 EFCAB6Q5THR3 1501 aa11.91□□□□□ -0.5
SP140-202ENST00000373645 SLC26A8Q96RN1 970 aa11.91□□□□□ -0.5
SP140-202ENST00000373645 TET3O43151 1660 aa11.91□□□□□ -0.5
SP140-202ENST00000373645 IDI1Q13907 227 aa11.9□□□□□ -0.5
SP140-202ENST00000373645 EID1Q9Y6B2 187 aa11.9□□□□□ -0.5
SP140-202ENST00000373645 PTPN23Q9H3S7 1636 aa11.89□□□□□ -0.51
SP140-202ENST00000373645 DAPK1P53355 1430 aa11.89□□□□□ -0.51
SP140-202ENST00000373645 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
SP140-202ENST00000373645 ADGRB3O60242 1522 aa11.87□□□□□ -0.51
SP140-202ENST00000373645 LMTK2Q8IWU2 1503 aa11.87□□□□□ -0.51
SP140-202ENST00000373645 KCNA6P17658 529 aa11.87□□□□□ -0.51
SP140-202ENST00000373645 PROSER2Q86WR7 435 aaPredicted RBP11.87□□□□□ -0.51
SP140-202ENST00000373645 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
SP140-202ENST00000373645 CHIC2Q9UKJ5 165 aa11.87□□□□□ -0.51
SP140-202ENST00000373645 KDM5AP29375 1690 aaKnown RBP11.87□□□□□ -0.51
SP140-202ENST00000373645 NOS1P29475 1434 aa11.86□□□□□ -0.51
SP140-202ENST00000373645 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
SP140-202ENST00000373645 PPARGC1BQ86YN6 1023 aaKnown RBP11.85□□□□□ -0.51
SP140-202ENST00000373645 FGD6Q6ZV73 1430 aa11.85□□□□□ -0.51
SP140-202ENST00000373645 MYO5BQ9ULV0 1848 aa11.84□□□□□ -0.51
SP140-202ENST00000373645 KANK1Q14678 1352 aa11.84□□□□□ -0.51
SP140-202ENST00000373645 PHLPP1O60346 1717 aa11.84□□□□□ -0.51
SP140-202ENST00000373645 LRP6O75581 1613 aa11.84□□□□□ -0.51
SP140-202ENST00000373645 COL16A1Q07092 1604 aaPredicted RBP11.83□□□□□ -0.52
SP140-202ENST00000373645 ZFYVE9O95405 1425 aa11.83□□□□□ -0.52
SP140-202ENST00000373645 MSH6P52701 1360 aa11.81□□□□□ -0.52
SP140-202ENST00000373645 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
SP140-202ENST00000373645 ANKRD30AQ9BXX3 1397 aa11.8□□□□□ -0.52
SP140-202ENST00000373645 BCANQ96GW7 911 aa11.8□□□□□ -0.52
SP140-202ENST00000373645 SLAIN2Q9P270 581 aa11.8□□□□□ -0.52
SP140-202ENST00000373645 JCADQ9P266 1359 aa11.79□□□□□ -0.52
SP140-202ENST00000373645 CHD2O14647 1828 aaKnown RBP11.79□□□□□ -0.52
SP140-202ENST00000373645 RIMS2Q9UQ26 1411 aa11.79□□□□□ -0.52
SP140-202ENST00000373645 PLEKHG1Q9ULL1 1385 aa11.79□□□□□ -0.52
SP140-202ENST00000373645 TMEM131LA2VDJ0 1609 aa11.78□□□□□ -0.52
SP140-202ENST00000373645 ADGRL2O95490 1459 aa11.78□□□□□ -0.52
SP140-202ENST00000373645 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
SP140-202ENST00000373645 ADAMTS13Q76LX8 1427 aa11.77□□□□□ -0.52
SP140-202ENST00000373645 ABCB7O75027 752 aa11.76□□□□□ -0.53
SP140-202ENST00000373645 SLC52A1Q9NWF4 448 aa11.76□□□□□ -0.53
SP140-202ENST00000373645 ANKRD50Q9ULJ7 1429 aa11.76□□□□□ -0.53
SP140-202ENST00000373645 RPRD2Q5VT52 1461 aaKnown RBP11.76□□□□□ -0.53
SP140-202ENST00000373645 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.75□□□□□ -0.53
SP140-202ENST00000373645 PPP1R15AO75807 674 aaPredicted RBP11.75□□□□□ -0.53
SP140-202ENST00000373645 TRIM52Q96A61 297 aa11.75□□□□□ -0.53
SP140-202ENST00000373645 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
SP140-202ENST00000373645 E9PCH4 1651 aa11.73□□□□□ -0.53
SP140-202ENST00000373645 FAM50AQ14320 339 aaKnown RBP11.73□□□□□ -0.53
SP140-202ENST00000373645 DIP2AQ14689 1571 aa11.73□□□□□ -0.53
SP140-202ENST00000373645 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
SP140-202ENST00000373645 PTPRUQ92729 1446 aa11.73□□□□□ -0.53
SP140-202ENST00000373645 UPF1Q92900 1129 aaKnown RBP eCLIP11.73□□□□□ -0.53
SP140-202ENST00000373645 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
SP140-202ENST00000373645 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
SP140-202ENST00000373645 UNC13BO14795 1591 aa11.72□□□□□ -0.53
SP140-202ENST00000373645 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
SP140-202ENST00000373645 MEX3CQ5U5Q3 659 aaKnown RBP11.72□□□□□ -0.53
SP140-202ENST00000373645 SPATA31A6Q5VVP1 1343 aa11.71□□□□□ -0.53
SP140-202ENST00000373645 TBX22Q9Y458 520 aa11.71□□□□□ -0.53
SP140-202ENST00000373645 BRINP3Q76B58 766 aa11.7□□□□□ -0.54
SP140-202ENST00000373645 NCOA3Q9Y6Q9 1424 aa11.69□□□□□ -0.54
SP140-202ENST00000373645 NRXN3Q9Y4C0 1643 aa11.69□□□□□ -0.54
SP140-202ENST00000373645 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
SP140-202ENST00000373645 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
SP140-202ENST00000373645 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
SP140-202ENST00000373645 ASXL1Q8IXJ9 1541 aa11.69□□□□□ -0.54
SP140-202ENST00000373645 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
SP140-202ENST00000373645 ZNF772Q68DY9 489 aaPredicted RBP11.68□□□□□ -0.54
SP140-202ENST00000373645 CADPS2Q86UW7 1296 aa11.68□□□□□ -0.54
SP140-202ENST00000373645 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
SP140-202ENST00000373645 C19orf44Q9H6X5 657 aa11.68□□□□□ -0.54
SP140-202ENST00000373645 XRN1Q8IZH2 1706 aaKnown RBP11.68□□□□□ -0.54
SP140-202ENST00000373645 TRPM2O94759 1503 aa11.67□□□□□ -0.54
SP140-202ENST00000373645 ATF3P18847 181 aa11.67□□□□□ -0.54
SP140-202ENST00000373645 AMOTL2Q9Y2J4 779 aa11.67□□□□□ -0.54
SP140-202ENST00000373645 MST1RQ04912 1400 aa11.67□□□□□ -0.54
SP140-202ENST00000373645 IQGAP3Q86VI3 1631 aa11.67□□□□□ -0.54
SP140-202ENST00000373645 AFF2P51816 1311 aa11.66□□□□□ -0.54
SP140-202ENST00000373645 RGS12O14924 1447 aa11.66□□□□□ -0.54
SP140-202ENST00000373645 PIK3R4Q99570 1358 aa11.66□□□□□ -0.54
SP140-202ENST00000373645 NHSL1Q5SYE7 1610 aa11.65□□□□□ -0.54
SP140-202ENST00000373645 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.65□□□□□ -0.54
SP140-202ENST00000373645 RBM42Q9BTD8 480 aaKnown RBP11.65□□□□□ -0.54
SP140-202ENST00000373645 METP08581 1390 aa11.65□□□□□ -0.55
SP140-202ENST00000373645 DCCP43146 1447 aa11.64□□□□□ -0.55
SP140-202ENST00000373645 RXRBP28702 533 aa11.64□□□□□ -0.55
SP140-202ENST00000373645 HDGFP51858 240 aaKnown RBP11.64□□□□□ -0.55
SP140-202ENST00000373645 CDK12Q9NYV4 1490 aaPredicted RBP11.63□□□□□ -0.55
SP140-202ENST00000373645 SETBP1Q9Y6X0 1596 aa11.63□□□□□ -0.55
SP140-202ENST00000373645 SETD5Q9C0A6 1442 aa11.63□□□□□ -0.55
SP140-202ENST00000373645 RRBP1Q9P2E9 1410 aaKnown RBP11.63□□□□□ -0.55
SP140-202ENST00000373645 NALCNQ8IZF0 1738 aa11.63□□□□□ -0.55
SP140-202ENST00000373645 NUP155O75694 1391 aa11.62□□□□□ -0.55
SP140-202ENST00000373645 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
SP140-202ENST00000373645 SRCAPQ6ZRS2 3230 aa11.61□□□□□ -0.55
SP140-202ENST00000373645 C8orf37Q96NL8 207 aa11.61□□□□□ -0.55
SP140-202ENST00000373645 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
SP140-202ENST00000373645 ROCK1Q13464 1354 aa11.59□□□□□ -0.55
SP140-202ENST00000373645 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms