RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 CFAP70Q5T0N1 1121 aa17.23■□□□□ 0.35
TSC22D3-206ENST00000372397 MYOM2P54296 1465 aa17.23■□□□□ 0.35
TSC22D3-206ENST00000372397 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
TSC22D3-206ENST00000372397 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
TSC22D3-206ENST00000372397 RICTORQ6R327 1708 aa17.22■□□□□ 0.35
TSC22D3-206ENST00000372397 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
TSC22D3-206ENST00000372397 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
TSC22D3-206ENST00000372397 ABCC3O15438 1527 aa17.21■□□□□ 0.35
TSC22D3-206ENST00000372397 DIP2CQ9Y2E4 1556 aa17.21■□□□□ 0.35
TSC22D3-206ENST00000372397 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.34
TSC22D3-206ENST00000372397 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
TSC22D3-206ENST00000372397 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
TSC22D3-206ENST00000372397 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
TSC22D3-206ENST00000372397 ADGRB3O60242 1522 aa17.19■□□□□ 0.34
TSC22D3-206ENST00000372397 SENP3-EIF4A1A0A087X0R7 540 aa17.19■□□□□ 0.34
TSC22D3-206ENST00000372397 CDCA8Q53HL2 280 aa17.19■□□□□ 0.34
TSC22D3-206ENST00000372397 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
TSC22D3-206ENST00000372397 GLI2P10070 1586 aa17.18■□□□□ 0.34
TSC22D3-206ENST00000372397 CAMSAP1Q5T5Y3 1602 aa17.18■□□□□ 0.34
TSC22D3-206ENST00000372397 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
TSC22D3-206ENST00000372397 NOS1P29475 1434 aa17.17■□□□□ 0.34
TSC22D3-206ENST00000372397 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
TSC22D3-206ENST00000372397 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
TSC22D3-206ENST00000372397 SIGLEC1Q9BZZ2 1709 aa17.15■□□□□ 0.34
TSC22D3-206ENST00000372397 PPLO60437 1756 aa17.15■□□□□ 0.34
TSC22D3-206ENST00000372397 FAM69CQ0P6D2 419 aa17.14■□□□□ 0.34
TSC22D3-206ENST00000372397 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.34
TSC22D3-206ENST00000372397 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
TSC22D3-206ENST00000372397 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
TSC22D3-206ENST00000372397 SYNMO15061 1565 aa17.13■□□□□ 0.33
TSC22D3-206ENST00000372397 KDM5AP29375 1690 aaKnown RBP17.11■□□□□ 0.33
TSC22D3-206ENST00000372397 MYOM1P52179 1685 aa17.11■□□□□ 0.33
TSC22D3-206ENST00000372397 ERICH6BQ5W0A0 696 aa17.11■□□□□ 0.33
TSC22D3-206ENST00000372397 RPGRIP1LQ68CZ1 1315 aa17.11■□□□□ 0.33
TSC22D3-206ENST00000372397 SLC24A1O60721 1099 aa17.11■□□□□ 0.33
TSC22D3-206ENST00000372397 C14orf93Q9H972 538 aaKnown RBP17.1■□□□□ 0.33
TSC22D3-206ENST00000372397 TSPOAP1O95153 1857 aa17.1■□□□□ 0.33
TSC22D3-206ENST00000372397 DIP2BQ9P265 1576 aa17.1■□□□□ 0.33
TSC22D3-206ENST00000372397 SETBP1Q9Y6X0 1596 aa17.1■□□□□ 0.33
TSC22D3-206ENST00000372397 AMER1Q5JTC6 1135 aaPredicted RBP17.09■□□□□ 0.33
TSC22D3-206ENST00000372397 PIK3C2GO75747 1445 aa17.09■□□□□ 0.33
TSC22D3-206ENST00000372397 ZC3H13Q5T200 1668 aaKnown RBP17.09■□□□□ 0.33
TSC22D3-206ENST00000372397 ERVK-7P63135 1459 aa17.09■□□□□ 0.33
TSC22D3-206ENST00000372397 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
TSC22D3-206ENST00000372397 ARHGAP31Q2M1Z3 1444 aa17.09■□□□□ 0.33
TSC22D3-206ENST00000372397 MYO3AQ8NEV4 1616 aa17.07■□□□□ 0.32
TSC22D3-206ENST00000372397 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
TSC22D3-206ENST00000372397 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
TSC22D3-206ENST00000372397 ASXL1Q8IXJ9 1541 aa17.06■□□□□ 0.32
TSC22D3-206ENST00000372397 IDI1Q13907 227 aa17.06■□□□□ 0.32
TSC22D3-206ENST00000372397 NUTM2DQ5VT03 806 aaPredicted RBP17.06■□□□□ 0.32
TSC22D3-206ENST00000372397 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
TSC22D3-206ENST00000372397 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
TSC22D3-206ENST00000372397 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
TSC22D3-206ENST00000372397 CENPJQ9HC77 1338 aaPredicted RBP17.06■□□□□ 0.32
TSC22D3-206ENST00000372397 PPP2R1AP30153 589 aa17.05■□□□□ 0.32
TSC22D3-206ENST00000372397 ANP32EQ9BTT0 268 aa17.05■□□□□ 0.32
TSC22D3-206ENST00000372397 ADGRB1O14514 1584 aa17.04■□□□□ 0.32
TSC22D3-206ENST00000372397 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
TSC22D3-206ENST00000372397 SBNO2Q9Y2G9 1366 aa17.04■□□□□ 0.32
TSC22D3-206ENST00000372397 NEXMIFQ5QGS0 1516 aa17.03■□□□□ 0.32
TSC22D3-206ENST00000372397 INSRP06213 1382 aa17.02■□□□□ 0.32
TSC22D3-206ENST00000372397 RNF123Q5XPI4 1314 aa17.02■□□□□ 0.32
TSC22D3-206ENST00000372397 SLC52A1Q9NWF4 448 aa17.02■□□□□ 0.32
TSC22D3-206ENST00000372397 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.32
TSC22D3-206ENST00000372397 PREX1Q8TCU6 1659 aa17.01■□□□□ 0.31
TSC22D3-206ENST00000372397 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
TSC22D3-206ENST00000372397 BLMP54132 1417 aaPredicted RBP17.01■□□□□ 0.31
TSC22D3-206ENST00000372397 CARD14Q9BXL6 1004 aa17.01■□□□□ 0.31
TSC22D3-206ENST00000372397 MYO5BQ9ULV0 1848 aa17■□□□□ 0.31
TSC22D3-206ENST00000372397 ADAMTS8Q9UP79 889 aa16.99■□□□□ 0.31
TSC22D3-206ENST00000372397 PDE3BQ13370 1112 aa16.98■□□□□ 0.31
TSC22D3-206ENST00000372397 FBXO31Q5XUX0 539 aaPredicted RBP16.98■□□□□ 0.31
TSC22D3-206ENST00000372397 B4GALNT3Q6L9W6 998 aa16.97■□□□□ 0.31
TSC22D3-206ENST00000372397 TMEM131LA2VDJ0 1609 aa16.96■□□□□ 0.31
TSC22D3-206ENST00000372397 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.3
TSC22D3-206ENST00000372397 ZFYVE9O95405 1425 aa16.95■□□□□ 0.3
TSC22D3-206ENST00000372397 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
TSC22D3-206ENST00000372397 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
TSC22D3-206ENST00000372397 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
TSC22D3-206ENST00000372397 ARHGEF28Q8N1W1 1705 aaKnown RBP16.94■□□□□ 0.3
TSC22D3-206ENST00000372397 SLC12A5Q9H2X9 1139 aa16.94■□□□□ 0.3
TSC22D3-206ENST00000372397 AGLP35573 1532 aa16.93■□□□□ 0.3
TSC22D3-206ENST00000372397 RCAN3Q9UKA8 241 aa16.92■□□□□ 0.3
TSC22D3-206ENST00000372397 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
TSC22D3-206ENST00000372397 KIF13AQ9H1H9 1805 aa16.91■□□□□ 0.3
TSC22D3-206ENST00000372397 CLTCQ00610 1675 aaKnown RBP16.91■□□□□ 0.3
TSC22D3-206ENST00000372397 STK26Q9P289 416 aa16.91■□□□□ 0.3
TSC22D3-206ENST00000372397 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
TSC22D3-206ENST00000372397 NSD3Q9BZ95 1437 aa16.9■□□□□ 0.3
TSC22D3-206ENST00000372397 MLECQ14165 292 aa16.89■□□□□ 0.29
TSC22D3-206ENST00000372397 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
TSC22D3-206ENST00000372397 RRP1P56182 461 aaKnown RBP16.88■□□□□ 0.29
TSC22D3-206ENST00000372397 STAG3Q9UJ98 1225 aa16.88■□□□□ 0.29
TSC22D3-206ENST00000372397 RBM19Q9Y4C8 960 aaKnown RBP16.88■□□□□ 0.29
TSC22D3-206ENST00000372397 TULP4Q9NRJ4 1543 aa16.88■□□□□ 0.29
TSC22D3-206ENST00000372397 PUS7Q96PZ0 661 aaKnown RBP16.87■□□□□ 0.29
TSC22D3-206ENST00000372397 PLEKHH1Q9ULM0 1364 aa16.86■□□□□ 0.29
TSC22D3-206ENST00000372397 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
TSC22D3-206ENST00000372397 CABP2Q9NPB3 220 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms