RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
SHC1-203ENST00000368449 ZNF521Q96K83 1311 aa16.53■□□□□ 0.24
SHC1-203ENST00000368449 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.237e-6■■■■■ 27.3
SHC1-203ENST00000368449 KDM2BQ8NHM5 1336 aa16.52■□□□□ 0.23
SHC1-203ENST00000368449 IQGAP1P46940 1657 aa16.51■□□□□ 0.23
SHC1-203ENST00000368449 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
SHC1-203ENST00000368449 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
SHC1-203ENST00000368449 ABCC1P33527 1531 aa16.49■□□□□ 0.23
SHC1-203ENST00000368449 SCAF11Q99590 1463 aaKnown RBP16.48■□□□□ 0.23
SHC1-203ENST00000368449 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
SHC1-203ENST00000368449 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
SHC1-203ENST00000368449 TRPM2O94759 1503 aa16.46■□□□□ 0.23
SHC1-203ENST00000368449 CLTCL1P53675 1640 aa16.46■□□□□ 0.23
SHC1-203ENST00000368449 SLFN5Q08AF3 891 aa16.46■□□□□ 0.23
SHC1-203ENST00000368449 PTPRTO14522 1441 aa16.46■□□□□ 0.23
SHC1-203ENST00000368449 ASXL1Q8IXJ9 1541 aa16.46■□□□□ 0.23
SHC1-203ENST00000368449 SYNMO15061 1565 aa16.45■□□□□ 0.22
SHC1-203ENST00000368449 ZCCHC11Q5TAX3 1644 aaKnown RBP16.45■□□□□ 0.22
SHC1-203ENST00000368449 SPHKAPQ2M3C7 1700 aa16.45■□□□□ 0.22
SHC1-203ENST00000368449 SCAPERQ9BY12 1400 aa16.44■□□□□ 0.22
SHC1-203ENST00000368449 MYOM1P52179 1685 aa16.44■□□□□ 0.22
SHC1-203ENST00000368449 APAF1O14727 1248 aa16.44■□□□□ 0.22
SHC1-203ENST00000368449 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
SHC1-203ENST00000368449 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
SHC1-203ENST00000368449 PIK3C2GO75747 1445 aa16.44■□□□□ 0.22
SHC1-203ENST00000368449 SLC4A3P48751 1232 aa16.44■□□□□ 0.22
SHC1-203ENST00000368449 CDCA8Q53HL2 280 aa16.44■□□□□ 0.22
SHC1-203ENST00000368449 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
SHC1-203ENST00000368449 TRMT2AQ8IZ69 625 aaKnown RBP16.43■□□□□ 0.22
SHC1-203ENST00000368449 USP35Q9P2H5 1018 aa16.43■□□□□ 0.22
SHC1-203ENST00000368449 CENPQQ7L2Z9 268 aaPredicted RBP16.43■□□□□ 0.22
SHC1-203ENST00000368449 ZFYVE16Q7Z3T8 1539 aa16.42■□□□□ 0.22
SHC1-203ENST00000368449 CARD14Q9BXL6 1004 aa16.42■□□□□ 0.22
SHC1-203ENST00000368449 CEP152O94986 1710 aa16.42■□□□□ 0.22
SHC1-203ENST00000368449 BCAR3O75815 825 aa16.41■□□□□ 0.22
SHC1-203ENST00000368449 C8orf34Q49A92 452 aa16.4■□□□□ 0.22
SHC1-203ENST00000368449 ADGRF5Q8IZF2 1346 aa16.4■□□□□ 0.22
SHC1-203ENST00000368449 UGGT1Q9NYU2 1555 aa16.4■□□□□ 0.22
SHC1-203ENST00000368449 NPC1L1Q9UHC9 1359 aa16.4■□□□□ 0.22
SHC1-203ENST00000368449 RTEL1-TNFRSF6BF6WH68 1400 aa16.39■□□□□ 0.21
SHC1-203ENST00000368449 UBE2Q2Q8WVN8 375 aa16.39■□□□□ 0.21
SHC1-203ENST00000368449 CLASP1Q7Z460 1538 aa16.39■□□□□ 0.21
SHC1-203ENST00000368449 KIF3BO15066 747 aa16.39■□□□□ 0.21
SHC1-203ENST00000368449 RGS3P49796 1198 aa16.38■□□□□ 0.21
SHC1-203ENST00000368449 ERVK-7P63135 1459 aa16.38■□□□□ 0.21
SHC1-203ENST00000368449 STAC3Q96MF2 364 aa16.37■□□□□ 0.21
SHC1-203ENST00000368449 DEPDC5O75140 1603 aa16.37■□□□□ 0.21
SHC1-203ENST00000368449 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
SHC1-203ENST00000368449 FAM161AQ3B820 660 aa16.36■□□□□ 0.21
SHC1-203ENST00000368449 DDRGK1Q96HY6 314 aa16.36■□□□□ 0.21
SHC1-203ENST00000368449 EIF3AQ14152 1382 aaKnown RBP16.36■□□□□ 0.21
SHC1-203ENST00000368449 UHRF1BP1LA0JNW5 1464 aa16.36■□□□□ 0.21
SHC1-203ENST00000368449 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
SHC1-203ENST00000368449 TET3O43151 1660 aa16.36■□□□□ 0.21
SHC1-203ENST00000368449 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
SHC1-203ENST00000368449 EIF5BO60841 1220 aaKnown RBP16.35■□□□□ 0.21
SHC1-203ENST00000368449 KDM5AP29375 1690 aaKnown RBP16.34■□□□□ 0.21
SHC1-203ENST00000368449 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
SHC1-203ENST00000368449 IGHDP01880 384 aa16.33■□□□□ 0.21
SHC1-203ENST00000368449 GSE1Q14687 1217 aa16.33■□□□□ 0.21
SHC1-203ENST00000368449 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
SHC1-203ENST00000368449 ATP7AQ04656 1500 aa16.32■□□□□ 0.2
SHC1-203ENST00000368449 KANK1Q14678 1352 aa16.32■□□□□ 0.2
SHC1-203ENST00000368449 E9PSI1 815 aa16.32■□□□□ 0.2
SHC1-203ENST00000368449 MAP3K4Q9Y6R4 1608 aa16.31■□□□□ 0.2
SHC1-203ENST00000368449 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
SHC1-203ENST00000368449 NFKBIBQ15653 356 aa16.31■□□□□ 0.2
SHC1-203ENST00000368449 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
SHC1-203ENST00000368449 FANCAO15360 1455 aa16.3■□□□□ 0.2
SHC1-203ENST00000368449 INO80Q9ULG1 1556 aaPredicted RBP16.3■□□□□ 0.2
SHC1-203ENST00000368449 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
SHC1-203ENST00000368449 WWC1Q8IX03 1113 aa16.29■□□□□ 0.2
SHC1-203ENST00000368449 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
SHC1-203ENST00000368449 PANK1Q8TE04 598 aa16.29■□□□□ 0.2
SHC1-203ENST00000368449 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
SHC1-203ENST00000368449 MYOM2P54296 1465 aa16.28■□□□□ 0.2
SHC1-203ENST00000368449 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
SHC1-203ENST00000368449 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
SHC1-203ENST00000368449 COG6Q9Y2V7 657 aa16.27■□□□□ 0.2
SHC1-203ENST00000368449 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.19
SHC1-203ENST00000368449 TRAK1Q9UPV9 953 aa16.26■□□□□ 0.19
SHC1-203ENST00000368449 MROH2AA6NES4 1674 aa16.26■□□□□ 0.19
SHC1-203ENST00000368449 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
SHC1-203ENST00000368449 CENPJQ9HC77 1338 aaPredicted RBP16.25■□□□□ 0.19
SHC1-203ENST00000368449 ADGRL1O94910 1474 aa16.25■□□□□ 0.19
SHC1-203ENST00000368449 ABCA9Q8IUA7 1624 aa16.25■□□□□ 0.19
SHC1-203ENST00000368449 USP19O94966 1318 aa16.25■□□□□ 0.19
SHC1-203ENST00000368449 NEURL4Q96JN8 1562 aa16.25■□□□□ 0.19
SHC1-203ENST00000368449 NOS1P29475 1434 aa16.24■□□□□ 0.19
SHC1-203ENST00000368449 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
SHC1-203ENST00000368449 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
SHC1-203ENST00000368449 NSD3Q9BZ95 1437 aa16.24■□□□□ 0.19
SHC1-203ENST00000368449 SEC24BO95487 1268 aa16.24■□□□□ 0.19
SHC1-203ENST00000368449 DAXXQ9UER7 740 aaPredicted RBP16.24■□□□□ 0.19
SHC1-203ENST00000368449 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
SHC1-203ENST00000368449 TMEM132EQ6IEE7 984 aa16.24■□□□□ 0.19
SHC1-203ENST00000368449 NRXN1Q9ULB1 1477 aa16.23■□□□□ 0.19
SHC1-203ENST00000368449 MORC1Q86VD1 984 aa16.23■□□□□ 0.19
SHC1-203ENST00000368449 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
SHC1-203ENST00000368449 IFT172Q9UG01 1749 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms