RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 ZNF326Q5BKZ1 582 aaKnown RBP20.43■□□□□ 0.86
MRPL55-205ENST00000366731 KDM5AP29375 1690 aaKnown RBP20.43■□□□□ 0.86
MRPL55-205ENST00000366731 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
MRPL55-205ENST00000366731 TMEM131LA2VDJ0 1609 aa20.42■□□□□ 0.86
MRPL55-205ENST00000366731 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.42■□□□□ 0.86
MRPL55-205ENST00000366731 ZFYVE9O95405 1425 aa20.41■□□□□ 0.86
MRPL55-205ENST00000366731 PIP4K2BP78356 416 aa20.41■□□□□ 0.86
MRPL55-205ENST00000366731 RBM33Q96EV2 1170 aaKnown RBP20.38■□□□□ 0.85
MRPL55-205ENST00000366731 MYO5BQ9ULV0 1848 aa20.38■□□□□ 0.85
MRPL55-205ENST00000366731 PLEKHG1Q9ULL1 1385 aa20.38■□□□□ 0.85
MRPL55-205ENST00000366731 TOM1O60784 492 aa20.37■□□□□ 0.85
MRPL55-205ENST00000366731 KCNA6P17658 529 aa20.37■□□□□ 0.85
MRPL55-205ENST00000366731 MPHOSPH9Q99550 1183 aa20.37■□□□□ 0.85
MRPL55-205ENST00000366731 LRRC7Q96NW7 1537 aa20.37■□□□□ 0.85
MRPL55-205ENST00000366731 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
MRPL55-205ENST00000366731 STRCP1A6NGW2 1772 aa20.35■□□□□ 0.85
MRPL55-205ENST00000366731 PROSER2Q86WR7 435 aaPredicted RBP20.35■□□□□ 0.85
MRPL55-205ENST00000366731 SPHKAPQ2M3C7 1700 aa20.34■□□□□ 0.85
MRPL55-205ENST00000366731 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
MRPL55-205ENST00000366731 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
MRPL55-205ENST00000366731 TRPM2O94759 1503 aa20.31■□□□□ 0.84
MRPL55-205ENST00000366731 RAB3GAP2Q9H2M9 1393 aa20.3■□□□□ 0.84
MRPL55-205ENST00000366731 TMEM94Q12767 1356 aa20.29■□□□□ 0.84
MRPL55-205ENST00000366731 ADAMTS13Q76LX8 1427 aa20.28■□□□□ 0.84
MRPL55-205ENST00000366731 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
MRPL55-205ENST00000366731 HSPA1LP34931 641 aa20.25■□□□□ 0.83
MRPL55-205ENST00000366731 AMOTL2Q9Y2J4 779 aa20.23■□□□□ 0.83
MRPL55-205ENST00000366731 ACIN1Q9UKV3 1341 aaKnown RBP20.22■□□□□ 0.83
MRPL55-205ENST00000366731 CCDC144AA2RUR9 1427 aa20.22■□□□□ 0.83
MRPL55-205ENST00000366731 VGFO15240 615 aaPredicted RBP20.22■□□□□ 0.83
MRPL55-205ENST00000366731 C14orf37Q86TY3 774 aa20.22■□□□□ 0.83
MRPL55-205ENST00000366731 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
MRPL55-205ENST00000366731 NEXMIFQ5QGS0 1516 aa20.2■□□□□ 0.82
MRPL55-205ENST00000366731 NKTRP30414 1462 aaKnown RBP20.19■□□□□ 0.82
MRPL55-205ENST00000366731 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
MRPL55-205ENST00000366731 RPGRIP1LQ68CZ1 1315 aa20.19■□□□□ 0.82
MRPL55-205ENST00000366731 METP08581 1390 aa20.19■□□□□ 0.82
MRPL55-205ENST00000366731 KIF1BO60333 1816 aa20.18■□□□□ 0.82
MRPL55-205ENST00000366731 NWD1Q149M9 1564 aa20.18■□□□□ 0.82
MRPL55-205ENST00000366731 MSH6P52701 1360 aa20.17■□□□□ 0.82
MRPL55-205ENST00000366731 PIK3R4Q99570 1358 aa20.17■□□□□ 0.82
MRPL55-205ENST00000366731 DIP2AQ14689 1571 aa20.16■□□□□ 0.82
MRPL55-205ENST00000366731 XIRP1Q702N8 1843 aaKnown RBP20.16■□□□□ 0.82
MRPL55-205ENST00000366731 CHD2O14647 1828 aaKnown RBP20.15■□□□□ 0.82
MRPL55-205ENST00000366731 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.82
MRPL55-205ENST00000366731 ADGRF5Q8IZF2 1346 aa20.14■□□□□ 0.81
MRPL55-205ENST00000366731 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
MRPL55-205ENST00000366731 HRCP23327 699 aa20.12■□□□□ 0.81
MRPL55-205ENST00000366731 DISP3Q9P2K9 1392 aa20.12■□□□□ 0.81
MRPL55-205ENST00000366731 SPATA31E1Q6ZUB1 1445 aa20.12■□□□□ 0.81
MRPL55-205ENST00000366731 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
MRPL55-205ENST00000366731 C19orf44Q9H6X5 657 aa20.1■□□□□ 0.81
MRPL55-205ENST00000366731 ATF3P18847 181 aa20.1■□□□□ 0.81
MRPL55-205ENST00000366731 FAM135BQ49AJ0 1406 aa20.07■□□□□ 0.8
MRPL55-205ENST00000366731 NCOA3Q9Y6Q9 1424 aa20.07■□□□□ 0.8
MRPL55-205ENST00000366731 ANKRD30BQ9BXX2 1392 aa20.07■□□□□ 0.8
MRPL55-205ENST00000366731 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
MRPL55-205ENST00000366731 STK26Q9P289 416 aa20.05■□□□□ 0.8
MRPL55-205ENST00000366731 TMEM132EQ6IEE7 984 aa20.04■□□□□ 0.8
MRPL55-205ENST00000366731 PPLO60437 1756 aa20.03■□□□□ 0.8
MRPL55-205ENST00000366731 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.8
MRPL55-205ENST00000366731 XRN1Q8IZH2 1706 aaKnown RBP20.02■□□□□ 0.8
MRPL55-205ENST00000366731 ROBO2Q9HCK4 1378 aa20.01■□□□□ 0.79
MRPL55-205ENST00000366731 CFAP70Q5T0N1 1121 aa19.99■□□□□ 0.79
MRPL55-205ENST00000366731 ROBO1Q9Y6N7 1651 aa19.98■□□□□ 0.79
MRPL55-205ENST00000366731 DCAF11Q8TEB1 546 aa19.98■□□□□ 0.79
MRPL55-205ENST00000366731 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.98■□□□□ 0.79
MRPL55-205ENST00000366731 WAPLQ7Z5K2 1190 aa19.96■□□□□ 0.79
MRPL55-205ENST00000366731 C14orf93Q9H972 538 aaKnown RBP19.96■□□□□ 0.79
MRPL55-205ENST00000366731 PIK3C2GO75747 1445 aa19.96■□□□□ 0.79
MRPL55-205ENST00000366731 ILDR2Q71H61 639 aa19.95■□□□□ 0.78
MRPL55-205ENST00000366731 BRINP3Q76B58 766 aa19.95■□□□□ 0.78
MRPL55-205ENST00000366731 ADGRL3Q9HAR2 1447 aa19.95■□□□□ 0.78
MRPL55-205ENST00000366731 SETD1AO15047 1707 aaKnown RBP19.95■□□□□ 0.78
MRPL55-205ENST00000366731 PTCH1Q13635 1447 aa19.94■□□□□ 0.78
MRPL55-205ENST00000366731 LRPPRCP42704 1394 aaKnown RBP19.93■□□□□ 0.78
MRPL55-205ENST00000366731 IFT172Q9UG01 1749 aa19.93■□□□□ 0.78
MRPL55-205ENST00000366731 DCCP43146 1447 aa19.92■□□□□ 0.78
MRPL55-205ENST00000366731 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
MRPL55-205ENST00000366731 MST1RQ04912 1400 aa19.91■□□□□ 0.78
MRPL55-205ENST00000366731 DDX17Q92841 729 aaKnown RBP19.91■□□□□ 0.78
MRPL55-205ENST00000366731 MED1Q15648 1581 aaPredicted RBP19.9■□□□□ 0.78
MRPL55-205ENST00000366731 MYOM2P54296 1465 aa19.9■□□□□ 0.78
MRPL55-205ENST00000366731 ABCC11Q96J66 1382 aa19.9■□□□□ 0.78
MRPL55-205ENST00000366731 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
MRPL55-205ENST00000366731 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.78
MRPL55-205ENST00000366731 ASXL1Q8IXJ9 1541 aa19.89■□□□□ 0.77
MRPL55-205ENST00000366731 NUTM2FA1L443 756 aa19.89■□□□□ 0.77
MRPL55-205ENST00000366731 DHX57Q6P158 1386 aaKnown RBP19.89■□□□□ 0.77
MRPL55-205ENST00000366731 NRXN1Q9ULB1 1477 aa19.88■□□□□ 0.77
MRPL55-205ENST00000366731 SAFB2Q14151 953 aaKnown RBP eCLIP19.88■□□□□ 0.77
MRPL55-205ENST00000366731 TRIM26Q12899 539 aaPredicted RBP19.87■□□□□ 0.77
MRPL55-205ENST00000366731 ORAI2Q96SN7 254 aa19.87■□□□□ 0.77
MRPL55-205ENST00000366731 NALCNQ8IZF0 1738 aa19.87■□□□□ 0.77
MRPL55-205ENST00000366731 PRAG1Q86YV5 1406 aa19.86■□□□□ 0.77
MRPL55-205ENST00000366731 PHLPP1O60346 1717 aa19.86■□□□□ 0.77
MRPL55-205ENST00000366731 SIN3AQ96ST3 1273 aa19.85■□□□□ 0.77
MRPL55-205ENST00000366731 C1orf167Q5SNV9 1468 aa19.85■□□□□ 0.77
MRPL55-205ENST00000366731 JCADQ9P266 1359 aa19.85■□□□□ 0.77
MRPL55-205ENST00000366731 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms