RNA–Protein interactions for RNA: ENST00000366522.6

EFCAB2-202, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2 BASIC

Gene EFCAB2, Length 6,167 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-202ENST00000366522 ELL2O00472 640 aaPredicted RBP17.97■□□□□ 0.47
EFCAB2-202ENST00000366522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.97■□□□□ 0.47
EFCAB2-202ENST00000366522 NUTM2FA1L443 756 aa17.96■□□□□ 0.47
EFCAB2-202ENST00000366522 CUX2O14529 1486 aa17.96■□□□□ 0.47
EFCAB2-202ENST00000366522 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
EFCAB2-202ENST00000366522 H3BQV1 296 aa17.96■□□□□ 0.46
EFCAB2-202ENST00000366522 IFFO2Q5TF58 517 aa17.96■□□□□ 0.46
EFCAB2-202ENST00000366522 TAF3Q5VWG9 929 aa17.96■□□□□ 0.46
EFCAB2-202ENST00000366522 LRRFIP1Q32MZ4 808 aaKnown RBP17.95■□□□□ 0.46
EFCAB2-202ENST00000366522 NUP155O75694 1391 aa17.94■□□□□ 0.46
EFCAB2-202ENST00000366522 ANKRD30AQ9BXX3 1397 aa17.94■□□□□ 0.46
EFCAB2-202ENST00000366522 HOMER1Q86YM7 354 aa17.94■□□□□ 0.46
EFCAB2-202ENST00000366522 ERCC4Q92889 916 aaPredicted RBP17.94■□□□□ 0.46
EFCAB2-202ENST00000366522 TTC5Q8N0Z6 440 aa17.94■□□□□ 0.46
EFCAB2-202ENST00000366522 MNS1Q8NEH6 495 aa17.94■□□□□ 0.46
EFCAB2-202ENST00000366522 ANKRD45Q5TZF3 282 aa17.94■□□□□ 0.46
EFCAB2-202ENST00000366522 MPHOSPH9Q99550 1183 aa17.93■□□□□ 0.46
EFCAB2-202ENST00000366522 FAM161AQ3B820 660 aa17.93■□□□□ 0.46
EFCAB2-202ENST00000366522 LEKR1Q6ZMV7 388 aa17.93■□□□□ 0.46
EFCAB2-202ENST00000366522 CCDC39Q9UFE4 941 aa17.93■□□□□ 0.46
EFCAB2-202ENST00000366522 FAM184AQ8NB25 1140 aa17.92■□□□□ 0.46
EFCAB2-202ENST00000366522 HSP90AB3PQ58FF7 597 aa17.92■□□□□ 0.46
EFCAB2-202ENST00000366522 R3HCC1Q9Y3T6 440 aaKnown RBP17.91■□□□□ 0.46
EFCAB2-202ENST00000366522 VPS37DQ86XT2 251 aa17.91■□□□□ 0.46
EFCAB2-202ENST00000366522 IPO7O95373 1038 aaKnown RBP17.91■□□□□ 0.46
EFCAB2-202ENST00000366522 CCDC47Q96A33 483 aaKnown RBP17.9■□□□□ 0.46
EFCAB2-202ENST00000366522 COG6Q9Y2V7 657 aa17.9■□□□□ 0.46
EFCAB2-202ENST00000366522 DHX16O60231 1041 aaKnown RBP17.9■□□□□ 0.46
EFCAB2-202ENST00000366522 FOSBP53539 338 aa17.9■□□□□ 0.46
EFCAB2-202ENST00000366522 CCDC43Q96MW1 224 aaKnown RBP17.89■□□□□ 0.45
EFCAB2-202ENST00000366522 NEXNQ0ZGT2 675 aa17.89■□□□□ 0.45
EFCAB2-202ENST00000366522 ZRSR2Q15696 482 aaKnown RBP17.88■□□□□ 0.45
EFCAB2-202ENST00000366522 RRP1P56182 461 aaKnown RBP17.88■□□□□ 0.45
EFCAB2-202ENST00000366522 SYTL4Q96C24 671 aaPredicted RBP17.88■□□□□ 0.45
EFCAB2-202ENST00000366522 L3MBTL2Q969R5 705 aa17.87■□□□□ 0.45
EFCAB2-202ENST00000366522 PLCD4Q9BRC7 762 aa17.87■□□□□ 0.45
EFCAB2-202ENST00000366522 USP8P40818 1118 aa17.87■□□□□ 0.45
EFCAB2-202ENST00000366522 TEFQ10587 303 aa17.87■□□□□ 0.45
EFCAB2-202ENST00000366522 TRIM29Q14134 588 aa17.87■□□□□ 0.45
EFCAB2-202ENST00000366522 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
EFCAB2-202ENST00000366522 IL27Q8NEV9 243 aa17.87■□□□□ 0.45
EFCAB2-202ENST00000366522 COG3Q96JB2 828 aa17.86■□□□□ 0.45
EFCAB2-202ENST00000366522 CPLX2Q6PUV4 134 aaKnown RBP17.86■□□□□ 0.45
EFCAB2-202ENST00000366522 NGEFQ8N5V2 710 aa17.86■□□□□ 0.45
EFCAB2-202ENST00000366522 BRPF3Q9ULD4 1205 aa17.85■□□□□ 0.45
EFCAB2-202ENST00000366522 PCMTD1Q96MG8 357 aaPredicted RBP17.85■□□□□ 0.45
EFCAB2-202ENST00000366522 CENPQQ7L2Z9 268 aaPredicted RBP17.85■□□□□ 0.45
EFCAB2-202ENST00000366522 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
EFCAB2-202ENST00000366522 NACADO15069 1562 aa17.84■□□□□ 0.45
EFCAB2-202ENST00000366522 ANKRD20A12PQ8NF67 263 aa17.84■□□□□ 0.45
EFCAB2-202ENST00000366522 MRE11P49959 708 aa17.83■□□□□ 0.45
EFCAB2-202ENST00000366522 RRP9O43818 475 aaKnown RBP17.83■□□□□ 0.44
EFCAB2-202ENST00000366522 NEFHP12036 1026 aa17.83■□□□□ 0.44
EFCAB2-202ENST00000366522 RBM33Q96EV2 1170 aaKnown RBP17.83■□□□□ 0.44
EFCAB2-202ENST00000366522 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.44
EFCAB2-202ENST00000366522 NECTIN2Q92692 538 aa17.82■□□□□ 0.44
EFCAB2-202ENST00000366522 HNRNPMP52272 730 aaKnown RBP eCLIP17.82■□□□□ 0.44
EFCAB2-202ENST00000366522 DEF6Q9H4E7 631 aa17.81■□□□□ 0.44
EFCAB2-202ENST00000366522 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
EFCAB2-202ENST00000366522 RBM10P98175 930 aaKnown RBP17.81■□□□□ 0.44
EFCAB2-202ENST00000366522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.81■□□□□ 0.443e-6■■■■■ 154.8
EFCAB2-202ENST00000366522 TRAK1Q9UPV9 953 aa17.81■□□□□ 0.44
EFCAB2-202ENST00000366522 TSPYL1Q9H0U9 437 aa17.81■□□□□ 0.44
EFCAB2-202ENST00000366522 HMGN5P82970 282 aaKnown RBP17.8■□□□□ 0.44
EFCAB2-202ENST00000366522 CHMP5Q9NZZ3 219 aa17.8■□□□□ 0.44
EFCAB2-202ENST00000366522 INCENPQ9NQS7 918 aa17.8■□□□□ 0.44
EFCAB2-202ENST00000366522 C9orf78Q9NZ63 289 aaPredicted RBP17.8■□□□□ 0.44
EFCAB2-202ENST00000366522 RSPH4AQ5TD94 716 aa17.79■□□□□ 0.44
EFCAB2-202ENST00000366522 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
EFCAB2-202ENST00000366522 PANK3Q9H999 370 aa17.79■□□□□ 0.44
EFCAB2-202ENST00000366522 HOOK1Q9UJC3 728 aaKnown RBP17.79■□□□□ 0.44
EFCAB2-202ENST00000366522 KIAA0754O94854 1291 aa17.78■□□□□ 0.44
EFCAB2-202ENST00000366522 ERICH2A1L162 156 aa17.78■□□□□ 0.44
EFCAB2-202ENST00000366522 NFKBIBQ15653 356 aa17.78■□□□□ 0.44
EFCAB2-202ENST00000366522 NLRP13Q86W25 1043 aa17.78■□□□□ 0.44
EFCAB2-202ENST00000366522 PSME1Q06323 249 aa17.78■□□□□ 0.44
EFCAB2-202ENST00000366522 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
EFCAB2-202ENST00000366522 WASHC2AQ641Q2 1341 aa17.78■□□□□ 0.44
EFCAB2-202ENST00000366522 EIF2S2P20042 333 aaKnown RBP17.78■□□□□ 0.44
EFCAB2-202ENST00000366522 MYO6Q9UM54 1294 aa17.77■□□□□ 0.44
EFCAB2-202ENST00000366522 DDX58O95786 925 aaKnown RBP17.77■□□□□ 0.44
EFCAB2-202ENST00000366522 GOLGA6L7A0A1B0GV03 622 aa17.77■□□□□ 0.44
EFCAB2-202ENST00000366522 KDM4AO75164 1064 aa17.77■□□□□ 0.44
EFCAB2-202ENST00000366522 TRDNQ13061 729 aa17.77■□□□□ 0.43
EFCAB2-202ENST00000366522 DYDC1Q8WWB3 177 aa17.77■□□□□ 0.43
EFCAB2-202ENST00000366522 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
EFCAB2-202ENST00000366522 UACAQ9BZF9 1416 aa17.76■□□□□ 0.43
EFCAB2-202ENST00000366522 CCP110O43303 1012 aa17.76■□□□□ 0.43
EFCAB2-202ENST00000366522 NFXL1Q6ZNB6 911 aa17.75■□□□□ 0.43
EFCAB2-202ENST00000366522 CPLX1O14810 134 aa17.75■□□□□ 0.43
EFCAB2-202ENST00000366522 RNF214Q8ND24 703 aa17.75■□□□□ 0.43
EFCAB2-202ENST00000366522 VPS8Q8N3P4 1428 aa17.75■□□□□ 0.43
EFCAB2-202ENST00000366522 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
EFCAB2-202ENST00000366522 SASS6Q6UVJ0 657 aa17.74■□□□□ 0.43
EFCAB2-202ENST00000366522 MYBBP1AQ9BQG0 1328 aaKnown RBP17.74■□□□□ 0.43
EFCAB2-202ENST00000366522 FMN1Q68DA7 1419 aa17.74■□□□□ 0.43
EFCAB2-202ENST00000366522 NASPP49321 788 aaPredicted RBP17.74■□□□□ 0.43
EFCAB2-202ENST00000366522 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
EFCAB2-202ENST00000366522 ST20-MTHFSA0A0A6YYL1 179 aa17.74■□□□□ 0.43
EFCAB2-202ENST00000366522 GIMAP7Q8NHV1 300 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms