RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 ZFYVE9O95405 1425 aa15.5■□□□□ 0.07
SNX6-201ENST00000362031 UHRF1BP1Q6BDS2 1440 aa15.5■□□□□ 0.07
SNX6-201ENST00000362031 IFT172Q9UG01 1749 aa15.5■□□□□ 0.07
SNX6-201ENST00000362031 TMEM2Q9UHN6 1383 aa15.5■□□□□ 0.07
SNX6-201ENST00000362031 PPLO60437 1756 aa15.49■□□□□ 0.07
SNX6-201ENST00000362031 ZNF142P52746 1687 aaPredicted RBP15.49■□□□□ 0.07
SNX6-201ENST00000362031 RIMS2Q9UQ26 1411 aa15.49■□□□□ 0.07
SNX6-201ENST00000362031 HSPA2P54652 639 aa15.48■□□□□ 0.07
SNX6-201ENST00000362031 KDM5AP29375 1690 aaKnown RBP15.48■□□□□ 0.07
SNX6-201ENST00000362031 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
SNX6-201ENST00000362031 THEMISQ8N1K5 641 aaPredicted RBP15.47■□□□□ 0.07
SNX6-201ENST00000362031 RPGRIP1LQ68CZ1 1315 aa15.47■□□□□ 0.07
SNX6-201ENST00000362031 LMTK3Q96Q04 1460 aa15.47■□□□□ 0.07
SNX6-201ENST00000362031 PRAG1Q86YV5 1406 aa15.46■□□□□ 0.07
SNX6-201ENST00000362031 ARHGAP23Q9P227 1491 aa15.46■□□□□ 0.07
SNX6-201ENST00000362031 SLIT1O75093 1534 aa15.45■□□□□ 0.06
SNX6-201ENST00000362031 NRXN1Q9ULB1 1477 aa15.45■□□□□ 0.06
SNX6-201ENST00000362031 MYOM2P54296 1465 aa15.44■□□□□ 0.06
SNX6-201ENST00000362031 NBPF1Q3BBV0 1214 aa15.44■□□□□ 0.06
SNX6-201ENST00000362031 TXNDC2Q86VQ3 553 aa15.44■□□□□ 0.06
SNX6-201ENST00000362031 CFAP70Q5T0N1 1121 aa15.43■□□□□ 0.06
SNX6-201ENST00000362031 VGFO15240 615 aaPredicted RBP15.42■□□□□ 0.06
SNX6-201ENST00000362031 PIK3C2GO75747 1445 aa15.42■□□□□ 0.06
SNX6-201ENST00000362031 NCKAP5LQ9HCH0 1330 aa15.41■□□□□ 0.06
SNX6-201ENST00000362031 NRXN3Q9Y4C0 1643 aa15.4■□□□□ 0.06
SNX6-201ENST00000362031 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.39■□□□□ 0.05
SNX6-201ENST00000362031 SCAF11Q99590 1463 aaKnown RBP15.39■□□□□ 0.05
SNX6-201ENST00000362031 TMEM132EQ6IEE7 984 aa15.38■□□□□ 0.05
SNX6-201ENST00000362031 C14orf93Q9H972 538 aaKnown RBP15.38■□□□□ 0.05
SNX6-201ENST00000362031 EID1Q9Y6B2 187 aa15.38■□□□□ 0.05
SNX6-201ENST00000362031 TRPM1Q7Z4N2 1603 aa15.38■□□□□ 0.05
SNX6-201ENST00000362031 ANKLE2Q86XL3 938 aa15.38■□□□□ 0.05
SNX6-201ENST00000362031 STAC3Q96MF2 364 aa15.38■□□□□ 0.05
SNX6-201ENST00000362031 SLC26A8Q96RN1 970 aa15.38■□□□□ 0.05
SNX6-201ENST00000362031 ADAMTS13Q76LX8 1427 aa15.37■□□□□ 0.05
SNX6-201ENST00000362031 PLEKHG1Q9ULL1 1385 aa15.37■□□□□ 0.05
SNX6-201ENST00000362031 IQGAP1P46940 1657 aa15.37■□□□□ 0.05
SNX6-201ENST00000362031 RALGAPBQ86X10 1494 aa15.36■□□□□ 0.05
SNX6-201ENST00000362031 ALKQ9UM73 1620 aa15.35■□□□□ 0.05
SNX6-201ENST00000362031 HDGFP51858 240 aaKnown RBP15.35■□□□□ 0.05
SNX6-201ENST00000362031 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
SNX6-201ENST00000362031 BCANQ96GW7 911 aa15.34■□□□□ 0.05
SNX6-201ENST00000362031 METP08581 1390 aa15.34■□□□□ 0.05
SNX6-201ENST00000362031 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
SNX6-201ENST00000362031 SETD1AO15047 1707 aaKnown RBP15.34■□□□□ 0.05
SNX6-201ENST00000362031 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
SNX6-201ENST00000362031 ADGRB1O14514 1584 aa15.34■□□□□ 0.05
SNX6-201ENST00000362031 STRCQ7RTU9 1775 aa15.34■□□□□ 0.05
SNX6-201ENST00000362031 MED14O60244 1454 aa15.33■□□□□ 0.04
SNX6-201ENST00000362031 HIRIP3Q9BW71 556 aaPredicted RBP15.33■□□□□ 0.04
SNX6-201ENST00000362031 POLR1AO95602 1720 aaPredicted RBP15.32■□□□□ 0.04
SNX6-201ENST00000362031 GPRASP1Q5JY77 1395 aa15.32■□□□□ 0.04
SNX6-201ENST00000362031 CARD11Q9BXL7 1154 aa15.31■□□□□ 0.04
SNX6-201ENST00000362031 NPHP4O75161 1426 aaPredicted RBP15.31■□□□□ 0.04
SNX6-201ENST00000362031 KIAA1210Q9ULL0 1709 aa15.31■□□□□ 0.04
SNX6-201ENST00000362031 PTPRUQ92729 1446 aa15.29■□□□□ 0.04
SNX6-201ENST00000362031 STK26Q9P289 416 aa15.29■□□□□ 0.04
SNX6-201ENST00000362031 TBX22Q9Y458 520 aa15.28■□□□□ 0.04
SNX6-201ENST00000362031 TRAK1Q9UPV9 953 aa15.27■□□□□ 0.04
SNX6-201ENST00000362031 LAMC1P11047 1609 aa15.27■□□□□ 0.03
SNX6-201ENST00000362031 HSPA5P11021 654 aaKnown RBP15.26■□□□□ 0.03
SNX6-201ENST00000362031 USP47Q96K76 1375 aa15.26■□□□□ 0.03
SNX6-201ENST00000362031 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
SNX6-201ENST00000362031 ST20-MTHFSA0A0A6YYL1 179 aa15.24■□□□□ 0.03
SNX6-201ENST00000362031 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
SNX6-201ENST00000362031 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
SNX6-201ENST00000362031 AMOTL2Q9Y2J4 779 aa15.22■□□□□ 0.03
SNX6-201ENST00000362031 PLEKHH1Q9ULM0 1364 aa15.22■□□□□ 0.03
SNX6-201ENST00000362031 KCNA6P17658 529 aa15.22■□□□□ 0.03
SNX6-201ENST00000362031 EIF4G2P78344 907 aaKnown RBP eCLIP15.22■□□□□ 0.03
SNX6-201ENST00000362031 ROBO2Q9HCK4 1378 aa15.21■□□□□ 0.03
SNX6-201ENST00000362031 DIP2AQ14689 1571 aa15.21■□□□□ 0.03
SNX6-201ENST00000362031 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNX6-201ENST00000362031 RBM33Q96EV2 1170 aaKnown RBP15.21■□□□□ 0.02
SNX6-201ENST00000362031 ABCC11Q96J66 1382 aa15.2■□□□□ 0.02
SNX6-201ENST00000362031 C11orf95C9JLR9 678 aaPredicted RBP15.2■□□□□ 0.02
SNX6-201ENST00000362031 ARHGEF28Q8N1W1 1705 aaKnown RBP15.19■□□□□ 0.02
SNX6-201ENST00000362031 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
SNX6-201ENST00000362031 TESK2Q96S53 571 aa15.19■□□□□ 0.02
SNX6-201ENST00000362031 CHD2O14647 1828 aaKnown RBP15.19■□□□□ 0.02
SNX6-201ENST00000362031 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
SNX6-201ENST00000362031 XRN1Q8IZH2 1706 aaKnown RBP15.18■□□□□ 0.02
SNX6-201ENST00000362031 ZNF335Q9H4Z2 1342 aaPredicted RBP15.18■□□□□ 0.02
SNX6-201ENST00000362031 TECPR2O15040 1411 aa15.18■□□□□ 0.02
SNX6-201ENST00000362031 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
SNX6-201ENST00000362031 CENPJQ9HC77 1338 aaPredicted RBP15.16■□□□□ 0.02
SNX6-201ENST00000362031 CPS1P31327 1500 aa15.15■□□□□ 0.02
SNX6-201ENST00000362031 DLC1Q96QB1 1528 aa15.15■□□□□ 0.02
SNX6-201ENST00000362031 KNDC1Q76NI1 1749 aa15.15■□□□□ 0.02
SNX6-201ENST00000362031 POGKQ9P215 609 aa15.14■□□□□ 0.01
SNX6-201ENST00000362031 MINK1Q8N4C8 1332 aaPredicted RBP15.13■□□□□ 0.01
SNX6-201ENST00000362031 NWD1Q149M9 1564 aa15.13■□□□□ 0.01
SNX6-201ENST00000362031 DISP3Q9P2K9 1392 aa15.13■□□□□ 0.01
SNX6-201ENST00000362031 PTCH1Q13635 1447 aa15.13■□□□□ 0.01
SNX6-201ENST00000362031 SIRT1Q96EB6 747 aa15.12■□□□□ 0.01
SNX6-201ENST00000362031 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
SNX6-201ENST00000362031 EIF3AQ14152 1382 aaKnown RBP15.12■□□□□ 0.01
SNX6-201ENST00000362031 QRICH2Q9H0J4 1663 aa15.12■□□□□ 0.01
SNX6-201ENST00000362031 FAM135BQ49AJ0 1406 aa15.12■□□□□ 0.01
SNX6-201ENST00000362031 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms