RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
SMG5-201ENST00000361813 PDE3AQ14432 1141 aa22.09■■□□□ 1.13
SMG5-201ENST00000361813 KIAA1107Q9UPP5 1409 aa22.09■■□□□ 1.13
SMG5-201ENST00000361813 NCOA1Q15788 1441 aa22.07■■□□□ 1.12
SMG5-201ENST00000361813 RIPK4P57078 832 aa22.07■■□□□ 1.12
SMG5-201ENST00000361813 MCTP1Q6DN14 999 aa22.06■■□□□ 1.12
SMG5-201ENST00000361813 STK31Q9BXU1 1019 aa22.05■■□□□ 1.12
SMG5-201ENST00000361813 PHF14O94880 888 aa22.05■■□□□ 1.12
SMG5-201ENST00000361813 AAMPQ13685 434 aa22.05■■□□□ 1.12
SMG5-201ENST00000361813 NASPP49321 788 aaPredicted RBP22.05■■□□□ 1.12
SMG5-201ENST00000361813 RILPL2Q969X0 211 aa22.03■■□□□ 1.12
SMG5-201ENST00000361813 ANKRD30BQ9BXX2 1392 aa22.03■■□□□ 1.12
SMG5-201ENST00000361813 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.02■■□□□ 1.12
SMG5-201ENST00000361813 MTHFSP49914 203 aa22.02■■□□□ 1.12
SMG5-201ENST00000361813 LMOD2Q6P5Q4 547 aa22.02■■□□□ 1.12
SMG5-201ENST00000361813 EFCAB5A4FU69 1503 aa22.01■■□□□ 1.11
SMG5-201ENST00000361813 R3HCC1Q9Y3T6 440 aaKnown RBP22.01■■□□□ 1.11
SMG5-201ENST00000361813 MLECQ14165 292 aa22.01■■□□□ 1.11
SMG5-201ENST00000361813 LMOD3Q0VAK6 560 aa22.01■■□□□ 1.11
SMG5-201ENST00000361813 MCM4P33991 863 aa22■■□□□ 1.11
SMG5-201ENST00000361813 NUCB2P80303 420 aa21.99■■□□□ 1.11
SMG5-201ENST00000361813 EHBP1L1Q8N3D4 1523 aa21.99■■□□□ 1.11
SMG5-201ENST00000361813 EVC2Q86UK5 1308 aa21.98■■□□□ 1.11
SMG5-201ENST00000361813 REC8O95072 547 aa21.98■■□□□ 1.11
SMG5-201ENST00000361813 KIF16BQ96L93 1317 aa21.97■■□□□ 1.11
SMG5-201ENST00000361813 PCF11O94913 1555 aaKnown RBP21.97■■□□□ 1.11
SMG5-201ENST00000361813 DIAPH1O60610 1272 aaKnown RBP21.97■■□□□ 1.11
SMG5-201ENST00000361813 SLFN5Q08AF3 891 aa21.96■■□□□ 1.11
SMG5-201ENST00000361813 RNF214Q8ND24 703 aa21.96■■□□□ 1.11
SMG5-201ENST00000361813 GRPEL1Q9HAV7 217 aa21.96■■□□□ 1.11
SMG5-201ENST00000361813 CFAP70Q5T0N1 1121 aa21.96■■□□□ 1.11
SMG5-201ENST00000361813 EXOSC9Q06265 439 aaKnown RBP21.95■■□□□ 1.1
SMG5-201ENST00000361813 CAVIN1Q6NZI2 390 aaKnown RBP21.95■■□□□ 1.1
SMG5-201ENST00000361813 DAPK1P53355 1430 aa21.95■■□□□ 1.1
SMG5-201ENST00000361813 TSR2Q969E8 191 aaKnown RBP21.94■■□□□ 1.1
SMG5-201ENST00000361813 MAP3K1Q13233 1512 aa21.94■■□□□ 1.1
SMG5-201ENST00000361813 PTPRGP23470 1445 aa21.94■■□□□ 1.1
SMG5-201ENST00000361813 MINK1Q8N4C8 1332 aaPredicted RBP21.94■■□□□ 1.1
SMG5-201ENST00000361813 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.18e-7■■■■■ 29.1
SMG5-201ENST00000361813 CSPP1Q1MSJ5 1256 aa21.93■■□□□ 1.1
SMG5-201ENST00000361813 GGNBP2Q9H3C7 697 aa21.93■■□□□ 1.1
SMG5-201ENST00000361813 A0A0G2JS52 829 aa21.93■■□□□ 1.1
SMG5-201ENST00000361813 ESPNB1AK53 854 aa21.93■■□□□ 1.1
SMG5-201ENST00000361813 PKNOX2Q96KN3 472 aa21.91■■□□□ 1.1
SMG5-201ENST00000361813 API5Q9BZZ5 524 aaKnown RBP21.91■■□□□ 1.1
SMG5-201ENST00000361813 RBM10P98175 930 aaKnown RBP21.91■■□□□ 1.1
SMG5-201ENST00000361813 INTS3Q68E01 1043 aaKnown RBP21.9■■□□□ 1.1
SMG5-201ENST00000361813 ANO2Q9NQ90 1003 aa21.9■■□□□ 1.1
SMG5-201ENST00000361813 CDC45O75419 566 aa21.9■■□□□ 1.1
SMG5-201ENST00000361813 TMEM132EQ6IEE7 984 aa21.9■■□□□ 1.1
SMG5-201ENST00000361813 PRDM2Q13029 1718 aa21.89■■□□□ 1.1
SMG5-201ENST00000361813 HTATSF1O43719 755 aaKnown RBP21.89■■□□□ 1.1
SMG5-201ENST00000361813 PRG4Q92954 1404 aaPredicted RBP21.89■■□□□ 1.09
SMG5-201ENST00000361813 NUTM2FA1L443 756 aa21.88■■□□□ 1.09
SMG5-201ENST00000361813 HMOX1P09601 288 aa21.88■■□□□ 1.09
SMG5-201ENST00000361813 C1orf115Q9H7X2 142 aa21.88■■□□□ 1.09
SMG5-201ENST00000361813 ERBINQ96RT1 1412 aa21.88■■□□□ 1.09
SMG5-201ENST00000361813 CHMP3Q9Y3E7 222 aa21.87■■□□□ 1.09
SMG5-201ENST00000361813 VGFO15240 615 aaPredicted RBP21.87■■□□□ 1.09
SMG5-201ENST00000361813 STAC3Q96MF2 364 aa21.87■■□□□ 1.09
SMG5-201ENST00000361813 SLC12A5Q9H2X9 1139 aa21.87■■□□□ 1.09
SMG5-201ENST00000361813 PRPF40AO75400 957 aaKnown RBP21.87■■□□□ 1.09
SMG5-201ENST00000361813 TPM2P07951 284 aa21.87■■□□□ 1.09
SMG5-201ENST00000361813 ATP6V1DQ9Y5K8 247 aa21.86■■□□□ 1.09
SMG5-201ENST00000361813 PTPRKQ15262 1439 aa21.86■■□□□ 1.09
SMG5-201ENST00000361813 MVPQ14764 893 aaKnown RBP21.85■■□□□ 1.09
SMG5-201ENST00000361813 NOB1Q9ULX3 412 aaKnown RBP21.85■■□□□ 1.09
SMG5-201ENST00000361813 SUPT6HQ7KZ85 1726 aaKnown RBP21.85■■□□□ 1.09
SMG5-201ENST00000361813 DUSP27Q5VZP5 1158 aa21.85■■□□□ 1.09
SMG5-201ENST00000361813 CCDC173Q0VFZ6 552 aa21.85■■□□□ 1.09
SMG5-201ENST00000361813 WWC1Q8IX03 1113 aa21.85■■□□□ 1.09
SMG5-201ENST00000361813 C9orf84Q5VXU9 1444 aa21.84■■□□□ 1.09
SMG5-201ENST00000361813 CABP2Q9NPB3 220 aa21.84■■□□□ 1.09
SMG5-201ENST00000361813 ROCK1Q13464 1354 aa21.84■■□□□ 1.09
SMG5-201ENST00000361813 RPRD2Q5VT52 1461 aaKnown RBP21.83■■□□□ 1.09
SMG5-201ENST00000361813 HSP90B1P14625 803 aaKnown RBP21.83■■□□□ 1.09
SMG5-201ENST00000361813 TBC1D2Q9BYX2 928 aa21.83■■□□□ 1.09
SMG5-201ENST00000361813 ISY1Q9ULR0 285 aaKnown RBP21.82■■□□□ 1.08
SMG5-201ENST00000361813 HDGFP51858 240 aaKnown RBP21.82■■□□□ 1.08
SMG5-201ENST00000361813 GPATCH3Q96I76 525 aa21.82■■□□□ 1.08
SMG5-201ENST00000361813 PTPN23Q9H3S7 1636 aa21.82■■□□□ 1.08
SMG5-201ENST00000361813 CDK13Q14004 1512 aaKnown RBP21.82■■□□□ 1.08
SMG5-201ENST00000361813 GNAI1P63096 354 aa21.81■■□□□ 1.08
SMG5-201ENST00000361813 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
SMG5-201ENST00000361813 GNL2Q13823 731 aaKnown RBP21.81■■□□□ 1.08
SMG5-201ENST00000361813 ZNF592Q92610 1267 aa21.8■■□□□ 1.08
SMG5-201ENST00000361813 ATF7IPQ6VMQ6 1270 aa21.8■■□□□ 1.08
SMG5-201ENST00000361813 WDR63Q8IWG1 891 aa21.79■■□□□ 1.08
SMG5-201ENST00000361813 COG3Q96JB2 828 aa21.79■■□□□ 1.08
SMG5-201ENST00000361813 CCDC39Q9UFE4 941 aa21.79■■□□□ 1.08
SMG5-201ENST00000361813 NINLQ9Y2I6 1382 aa21.79■■□□□ 1.08
SMG5-201ENST00000361813 K7ELQ4 463 aaPredicted RBP21.79■■□□□ 1.08
SMG5-201ENST00000361813 MPNDQ8N594 471 aa21.79■■□□□ 1.08
SMG5-201ENST00000361813 NECTIN2Q92692 538 aa21.79■■□□□ 1.08
SMG5-201ENST00000361813 RRP9O43818 475 aaKnown RBP21.79■■□□□ 1.08
SMG5-201ENST00000361813 NEK4P51957 841 aa21.78■■□□□ 1.08
SMG5-201ENST00000361813 LTV1Q96GA3 475 aaPredicted RBP21.78■■□□□ 1.08
SMG5-201ENST00000361813 IGHDP01880 384 aa21.78■■□□□ 1.08
SMG5-201ENST00000361813 MAP7D2Q96T17 732 aa21.78■■□□□ 1.08
SMG5-201ENST00000361813 EPRSP07814 1512 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms