RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 PDE4AP27815 886 aa15.19■□□□□ 0.02
DNMT1-202ENST00000359526 RRP1P56182 461 aaKnown RBP15.19■□□□□ 0.02
DNMT1-202ENST00000359526 PHF14O94880 888 aa15.18■□□□□ 0.02
DNMT1-202ENST00000359526 COG3Q96JB2 828 aa15.18■□□□□ 0.02
DNMT1-202ENST00000359526 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
DNMT1-202ENST00000359526 E9PSI1 815 aa15.18■□□□□ 0.02
DNMT1-202ENST00000359526 APBB1O00213 710 aa15.18■□□□□ 0.02
DNMT1-202ENST00000359526 TPM4P67936 248 aa15.18■□□□□ 0.02
DNMT1-202ENST00000359526 TNNT3P45378 269 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-202ENST00000359526 ST18O60284 1047 aa15.17■□□□□ 0.02
DNMT1-202ENST00000359526 SKOR2Q2VWA4 1001 aaPredicted RBP15.16■□□□□ 0.02
DNMT1-202ENST00000359526 AKNAQ7Z591 1439 aa15.16■□□□□ 0.02
DNMT1-202ENST00000359526 AMPHP49418 695 aa15.16■□□□□ 0.02
DNMT1-202ENST00000359526 ANO8Q9HCE9 1232 aaPredicted RBP15.16■□□□□ 0.02
DNMT1-202ENST00000359526 WDR62O43379 1518 aa15.16■□□□□ 0.02
DNMT1-202ENST00000359526 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
DNMT1-202ENST00000359526 CD109Q6YHK3 1445 aa15.15■□□□□ 0.02
DNMT1-202ENST00000359526 ST20-MTHFSA0A0A6YYL1 179 aa15.15■□□□□ 0.02
DNMT1-202ENST00000359526 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
DNMT1-202ENST00000359526 SOX12O15370 315 aa15.14■□□□□ 0.01
DNMT1-202ENST00000359526 PSME1Q06323 249 aa15.14■□□□□ 0.01
DNMT1-202ENST00000359526 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
DNMT1-202ENST00000359526 USP47Q96K76 1375 aa15.14■□□□□ 0.01
DNMT1-202ENST00000359526 CCDC34Q96HJ3 373 aa15.14■□□□□ 0.01
DNMT1-202ENST00000359526 PANK3Q9H999 370 aa15.14■□□□□ 0.01
DNMT1-202ENST00000359526 PKNOX2Q96KN3 472 aa15.13■□□□□ 0.01
DNMT1-202ENST00000359526 KIAA1107Q9UPP5 1409 aa15.13■□□□□ 0.01
DNMT1-202ENST00000359526 ATF3P18847 181 aa15.13■□□□□ 0.01
DNMT1-202ENST00000359526 CLUAP1Q96AJ1 413 aa15.12■□□□□ 0.01
DNMT1-202ENST00000359526 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
DNMT1-202ENST00000359526 WWC1Q8IX03 1113 aa15.11■□□□□ 0.01
DNMT1-202ENST00000359526 WASHC2AQ641Q2 1341 aa15.11■□□□□ 0.01
DNMT1-202ENST00000359526 TRIM6-TRIM34B2RNG4 842 aa15.11■□□□□ 0.01
DNMT1-202ENST00000359526 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
DNMT1-202ENST00000359526 EXOC6Q8TAG9 804 aa15.1■□□□□ 0.01
DNMT1-202ENST00000359526 DENND4BO75064 1496 aaPredicted RBP15.1■□□□□ 0.01
DNMT1-202ENST00000359526 ITSN2Q9NZM3 1697 aa15.1■□□□□ 0.01
DNMT1-202ENST00000359526 GPRASP1Q5JY77 1395 aa15.09■□□□□ 0.01
DNMT1-202ENST00000359526 KIF3AQ9Y496 699 aa15.09■□□□□ 0.01
DNMT1-202ENST00000359526 AAMPQ13685 434 aa15.09■□□□□ 0.01
DNMT1-202ENST00000359526 ADAMTS12P58397 1594 aa15.09■□□□□ 0.01
DNMT1-202ENST00000359526 CHMP4CQ96CF2 233 aa15.09■□□□□ 0.01
DNMT1-202ENST00000359526 CNTLNQ9NXG0 1405 aa15.08■□□□□ 0
DNMT1-202ENST00000359526 CRBNQ96SW2 442 aa15.08■□□□□ 0
DNMT1-202ENST00000359526 ADGRL1O94910 1474 aa15.08■□□□□ 0
DNMT1-202ENST00000359526 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
DNMT1-202ENST00000359526 C1orf141Q5JVX7 400 aa15.07■□□□□ 0
DNMT1-202ENST00000359526 TRAK1Q9UPV9 953 aa15.07■□□□□ 0
DNMT1-202ENST00000359526 ATP6V1DQ9Y5K8 247 aa15.07■□□□□ 0
DNMT1-202ENST00000359526 CTTNBP2Q8WZ74 1663 aa15.06■□□□□ 0
DNMT1-202ENST00000359526 KIF16BQ96L93 1317 aa15.06■□□□□ 0
DNMT1-202ENST00000359526 PCF11O94913 1555 aaKnown RBP15.06■□□□□ 0
DNMT1-202ENST00000359526 SLC4A3P48751 1232 aa15.06■□□□□ 0
DNMT1-202ENST00000359526 RAPGEF6Q8TEU7 1601 aa15.06■□□□□ 0
DNMT1-202ENST00000359526 ANKLE2Q86XL3 938 aa15.05■□□□□ -0
DNMT1-202ENST00000359526 CCDC7Q96M83 1385 aa15.04■□□□□ -0
DNMT1-202ENST00000359526 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
DNMT1-202ENST00000359526 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
DNMT1-202ENST00000359526 DDX19BQ9UMR2 479 aa15.04■□□□□ -0
DNMT1-202ENST00000359526 CCDC9Q9Y3X0 531 aaKnown RBP15.04■□□□□ -0
DNMT1-202ENST00000359526 CAMSAP2Q08AD1 1489 aa15.04■□□□□ -0
DNMT1-202ENST00000359526 DMRT2Q9Y5R5 561 aa15.04■□□□□ -0
DNMT1-202ENST00000359526 ZNF692Q9BU19 519 aaPredicted RBP15.04■□□□□ -0
DNMT1-202ENST00000359526 SLC4A10Q6U841 1118 aa15.03■□□□□ -0
DNMT1-202ENST00000359526 EVA1CP58658 441 aa15.03■□□□□ -0
DNMT1-202ENST00000359526 GORABQ5T7V8 394 aa15.02■□□□□ -0
DNMT1-202ENST00000359526 DDX49Q9Y6V7 483 aaKnown RBP15.02■□□□□ -0
DNMT1-202ENST00000359526 SMG6Q86US8 1419 aaKnown RBP15.02■□□□□ -0
DNMT1-202ENST00000359526 PTPN23Q9H3S7 1636 aa15.01□□□□□ -0.01
DNMT1-202ENST00000359526 PLIN1O60240 522 aa15.01□□□□□ -0.01
DNMT1-202ENST00000359526 ANKRD45Q5TZF3 282 aa15.01□□□□□ -0.01
DNMT1-202ENST00000359526 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
DNMT1-202ENST00000359526 CHMP5Q9NZZ3 219 aa15□□□□□ -0.01
DNMT1-202ENST00000359526 REC8O95072 547 aa15□□□□□ -0.01
DNMT1-202ENST00000359526 ATAD2Q6PL18 1390 aa14.99□□□□□ -0.01
DNMT1-202ENST00000359526 LRRFIP1Q32MZ4 808 aaKnown RBP14.99□□□□□ -0.01
DNMT1-202ENST00000359526 RRP7AQ9Y3A4 280 aaKnown RBP14.99□□□□□ -0.01
DNMT1-202ENST00000359526 COG6Q9Y2V7 657 aa14.99□□□□□ -0.01
DNMT1-202ENST00000359526 TXNDC2Q86VQ3 553 aa14.99□□□□□ -0.01
DNMT1-202ENST00000359526 GOLGA6L1Q8N7Z2 621 aa14.98□□□□□ -0.01
DNMT1-202ENST00000359526 BRD4O60885 1362 aaPredicted RBP14.98□□□□□ -0.01
DNMT1-202ENST00000359526 MEX3CQ5U5Q3 659 aaKnown RBP14.98□□□□□ -0.01
DNMT1-202ENST00000359526 AFAP1Q8N556 730 aa14.98□□□□□ -0.01
DNMT1-202ENST00000359526 APAF1O14727 1248 aa14.98□□□□□ -0.01
DNMT1-202ENST00000359526 API5Q9BZZ5 524 aaKnown RBP14.98□□□□□ -0.01
DNMT1-202ENST00000359526 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
DNMT1-202ENST00000359526 KIF7Q2M1P5 1343 aa14.97□□□□□ -0.01
DNMT1-202ENST00000359526 A0A0U1RQG5 324 aaPredicted RBP14.97□□□□□ -0.01
DNMT1-202ENST00000359526 DZIP1LQ8IYY4 767 aaKnown RBP14.97□□□□□ -0.01
DNMT1-202ENST00000359526 FANCAO15360 1455 aa14.97□□□□□ -0.01
DNMT1-202ENST00000359526 TAF7LQ5H9L4 462 aa14.97□□□□□ -0.01
DNMT1-202ENST00000359526 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.01
DNMT1-202ENST00000359526 CDK13Q14004 1512 aaKnown RBP14.96□□□□□ -0.01
DNMT1-202ENST00000359526 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.01
DNMT1-202ENST00000359526 ERBINQ96RT1 1412 aa14.96□□□□□ -0.02
DNMT1-202ENST00000359526 WDR7Q9Y4E6 1490 aa14.96□□□□□ -0.02
DNMT1-202ENST00000359526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.95□□□□□ -0.02
DNMT1-202ENST00000359526 RUNDC1Q96C34 613 aa14.95□□□□□ -0.02
DNMT1-202ENST00000359526 NOL8Q76FK4 1167 aaKnown RBP14.95□□□□□ -0.02
DNMT1-202ENST00000359526 RUFY2Q8WXA3 655 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms