RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 POLR1AO95602 1720 aaPredicted RBP35.55■■■■□ 3.28
ALKAL1-201ENST00000358543 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.54■■■■□ 3.28
ALKAL1-201ENST00000358543 RIMS2Q9UQ26 1411 aa35.54■■■■□ 3.28
ALKAL1-201ENST00000358543 ZNF326Q5BKZ1 582 aaKnown RBP35.53■■■■□ 3.28
ALKAL1-201ENST00000358543 NEURL4Q96JN8 1562 aa35.53■■■■□ 3.28
ALKAL1-201ENST00000358543 SPATA31E1Q6ZUB1 1445 aa35.51■■■■□ 3.28
ALKAL1-201ENST00000358543 RPGRIP1LQ68CZ1 1315 aa35.5■■■■□ 3.27
ALKAL1-201ENST00000358543 NPHP4O75161 1426 aaPredicted RBP35.49■■■■□ 3.27
ALKAL1-201ENST00000358543 PPP1R15AO75807 674 aaPredicted RBP35.43■■■■□ 3.26
ALKAL1-201ENST00000358543 RGL3Q3MIN7 710 aa35.42■■■■□ 3.26
ALKAL1-201ENST00000358543 NEXMIFQ5QGS0 1516 aa35.42■■■■□ 3.26
ALKAL1-201ENST00000358543 PLEKHG1Q9ULL1 1385 aa35.41■■■■□ 3.26
ALKAL1-201ENST00000358543 IQGAP1P46940 1657 aa35.4■■■■□ 3.26
ALKAL1-201ENST00000358543 NUTM2DQ5VT03 806 aaPredicted RBP35.39■■■■□ 3.26
ALKAL1-201ENST00000358543 VGFO15240 615 aaPredicted RBP35.38■■■■□ 3.25
ALKAL1-201ENST00000358543 PPLO60437 1756 aa35.33■■■■□ 3.25
ALKAL1-201ENST00000358543 BCANQ96GW7 911 aa35.3■■■■□ 3.24
ALKAL1-201ENST00000358543 SIN3AQ96ST3 1273 aa35.29■■■■□ 3.24
ALKAL1-201ENST00000358543 IFT172Q9UG01 1749 aa35.27■■■■□ 3.24
ALKAL1-201ENST00000358543 STAC3Q96MF2 364 aa35.27■■■■□ 3.24
ALKAL1-201ENST00000358543 TBX22Q9Y458 520 aa35.26■■■■□ 3.24
ALKAL1-201ENST00000358543 SLC26A8Q96RN1 970 aa35.25■■■■□ 3.23
ALKAL1-201ENST00000358543 SETBP1Q9Y6X0 1596 aa35.25■■■■□ 3.23
ALKAL1-201ENST00000358543 ADAMTS13Q76LX8 1427 aa35.24■■■■□ 3.23
ALKAL1-201ENST00000358543 CLSPNQ9HAW4 1339 aa35.23■■■■□ 3.23
ALKAL1-201ENST00000358543 NEUROD1Q13562 356 aa35.21■■■■□ 3.23
ALKAL1-201ENST00000358543 ADGRF5Q8IZF2 1346 aa35.21■■■■□ 3.23
ALKAL1-201ENST00000358543 MYOM2P54296 1465 aa35.21■■■■□ 3.23
ALKAL1-201ENST00000358543 DIP2AQ14689 1571 aa35.2■■■■□ 3.23
ALKAL1-201ENST00000358543 DCAF11Q8TEB1 546 aa35.19■■■■□ 3.22
ALKAL1-201ENST00000358543 SENP3Q9H4L4 574 aaPredicted RBP35.19■■■■□ 3.22
ALKAL1-201ENST00000358543 NRXN3Q9Y4C0 1643 aa35.19■■■■□ 3.22
ALKAL1-201ENST00000358543 ZNF335Q9H4Z2 1342 aaPredicted RBP35.18■■■■□ 3.22
ALKAL1-201ENST00000358543 NRXN1Q9ULB1 1477 aa35.16■■■■□ 3.22
ALKAL1-201ENST00000358543 PIK3R4Q99570 1358 aa35.14■■■■□ 3.22
ALKAL1-201ENST00000358543 PIK3C2GO75747 1445 aa35.14■■■■□ 3.22
ALKAL1-201ENST00000358543 LTBP4Q8N2S1 1624 aa35.12■■■■□ 3.21
ALKAL1-201ENST00000358543 KCNA6P17658 529 aa35.11■■■■□ 3.21
ALKAL1-201ENST00000358543 CCER1Q8TC90 406 aaPredicted RBP35.11■■■■□ 3.21
ALKAL1-201ENST00000358543 KDM2AQ9Y2K7 1162 aa35.11■■■■□ 3.21
ALKAL1-201ENST00000358543 L3MBTL2Q969R5 705 aa35.1■■■■□ 3.21
ALKAL1-201ENST00000358543 ALKQ9UM73 1620 aa35.09■■■■□ 3.21
ALKAL1-201ENST00000358543 C14orf93Q9H972 538 aaKnown RBP35.06■■■■□ 3.2
ALKAL1-201ENST00000358543 CPS1P31327 1500 aa35.06■■■■□ 3.2
ALKAL1-201ENST00000358543 METP08581 1390 aa35.05■■■■□ 3.2
ALKAL1-201ENST00000358543 CHD2O14647 1828 aaKnown RBP35.04■■■■□ 3.2
ALKAL1-201ENST00000358543 SETD1AO15047 1707 aaKnown RBP35.03■■■■□ 3.2
ALKAL1-201ENST00000358543 STRCP1A6NGW2 1772 aa35.02■■■■□ 3.2
ALKAL1-201ENST00000358543 NWD1Q149M9 1564 aa35.02■■■■□ 3.2
ALKAL1-201ENST00000358543 TONSLQ96HA7 1378 aa35.01■■■■□ 3.2
ALKAL1-201ENST00000358543 PTPRUQ92729 1446 aa34.99■■■■□ 3.19
ALKAL1-201ENST00000358543 AMOTL2Q9Y2J4 779 aa34.99■■■■□ 3.19
ALKAL1-201ENST00000358543 CFAP70Q5T0N1 1121 aa34.98■■■■□ 3.19
ALKAL1-201ENST00000358543 LAMC1P11047 1609 aa34.96■■■■□ 3.19
ALKAL1-201ENST00000358543 CERKQ8TCT0 537 aa34.96■■■■□ 3.19
ALKAL1-201ENST00000358543 TIMELESSQ9UNS1 1208 aa34.96■■■■□ 3.19
ALKAL1-201ENST00000358543 PRAG1Q86YV5 1406 aa34.96■■■■□ 3.19
ALKAL1-201ENST00000358543 NKTRP30414 1462 aaKnown RBP34.96■■■■□ 3.19
ALKAL1-201ENST00000358543 LRRC7Q96NW7 1537 aa34.92■■■■□ 3.18
ALKAL1-201ENST00000358543 XRN1Q8IZH2 1706 aaKnown RBP34.9■■■■□ 3.18
ALKAL1-201ENST00000358543 IQSEC2Q5JU85 1478 aa34.9■■■■□ 3.18
ALKAL1-201ENST00000358543 TMEM132EQ6IEE7 984 aa34.89■■■■□ 3.18
ALKAL1-201ENST00000358543 PROSER2Q86WR7 435 aaPredicted RBP34.89■■■■□ 3.18
ALKAL1-201ENST00000358543 ASXL1Q8IXJ9 1541 aa34.88■■■■□ 3.17
ALKAL1-201ENST00000358543 LRPPRCP42704 1394 aaKnown RBP34.87■■■■□ 3.17
ALKAL1-201ENST00000358543 KIAA1210Q9ULL0 1709 aa34.86■■■■□ 3.17
ALKAL1-201ENST00000358543 ABCC11Q96J66 1382 aa34.85■■■■□ 3.17
ALKAL1-201ENST00000358543 YTHDC2Q9H6S0 1430 aaKnown RBP34.84■■■■□ 3.17
ALKAL1-201ENST00000358543 TMEM94Q12767 1356 aa34.84■■■■□ 3.17
ALKAL1-201ENST00000358543 ADGRB1O14514 1584 aa34.83■■■■□ 3.17
ALKAL1-201ENST00000358543 NCOA3Q9Y6Q9 1424 aa34.83■■■■□ 3.17
ALKAL1-201ENST00000358543 PTCH1Q13635 1447 aa34.82■■■■□ 3.17
ALKAL1-201ENST00000358543 TECPR2O15040 1411 aa34.81■■■■□ 3.16
ALKAL1-201ENST00000358543 SIRT1Q96EB6 747 aa34.79■■■■□ 3.16
ALKAL1-201ENST00000358543 NBPF8Q3BBV2 869 aa34.78■■■■□ 3.16
ALKAL1-201ENST00000358543 STK26Q9P289 416 aa34.78■■■■□ 3.16
ALKAL1-201ENST00000358543 ROBO2Q9HCK4 1378 aa34.77■■■■□ 3.16
ALKAL1-201ENST00000358543 NBPF1Q3BBV0 1214 aa34.76■■■■□ 3.16
ALKAL1-201ENST00000358543 XIRP1Q702N8 1843 aaKnown RBP34.76■■■■□ 3.15
ALKAL1-201ENST00000358543 RBM33Q96EV2 1170 aaKnown RBP34.75■■■■□ 3.15
ALKAL1-201ENST00000358543 KNDC1Q76NI1 1749 aa34.75■■■■□ 3.15
ALKAL1-201ENST00000358543 TRPM1Q7Z4N2 1603 aa34.72■■■■□ 3.15
ALKAL1-201ENST00000358543 FAM135BQ49AJ0 1406 aa34.72■■■■□ 3.15
ALKAL1-201ENST00000358543 DLC1Q96QB1 1528 aa34.71■■■■□ 3.15
ALKAL1-201ENST00000358543 C19orf44Q9H6X5 657 aa34.68■■■■□ 3.14
ALKAL1-201ENST00000358543 TRAK1Q9UPV9 953 aa34.67■■■■□ 3.14
ALKAL1-201ENST00000358543 ROCK2O75116 1388 aaKnown RBP34.66■■■■□ 3.14
ALKAL1-201ENST00000358543 MSH6P52701 1360 aa34.66■■■■□ 3.14
ALKAL1-201ENST00000358543 C14orf37Q86TY3 774 aa34.66■■■■□ 3.14
ALKAL1-201ENST00000358543 WAPLQ7Z5K2 1190 aa34.65■■■■□ 3.14
ALKAL1-201ENST00000358543 GPRASP1Q5JY77 1395 aa34.64■■■■□ 3.14
ALKAL1-201ENST00000358543 RALGAPBQ86X10 1494 aa34.64■■■■□ 3.14
ALKAL1-201ENST00000358543 TOM1O60784 492 aa34.62■■■■□ 3.13
ALKAL1-201ENST00000358543 ADGRL3Q9HAR2 1447 aa34.62■■■■□ 3.13
ALKAL1-201ENST00000358543 PRAM1Q96QH2 718 aa34.61■■■■□ 3.13
ALKAL1-201ENST00000358543 PLEKHH1Q9ULM0 1364 aa34.61■■■■□ 3.13
ALKAL1-201ENST00000358543 UBAP1LF5GYI3 381 aa34.59■■■■□ 3.13
ALKAL1-201ENST00000358543 POGKQ9P215 609 aa34.59■■■■□ 3.13
ALKAL1-201ENST00000358543 DCCP43146 1447 aa34.58■■■■□ 3.13
ALKAL1-201ENST00000358543 CADPS2Q86UW7 1296 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms