RNA–Protein interactions for RNA: ENST00000357884.8

C19orf47-201, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 5

Gene C19orf47, Length 1,774 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-201ENST00000357884 MYOM2P54296 1465 aa23.43■■□□□ 1.34
C19orf47-201ENST00000357884 HNRNPUQ00839 825 aaKnown RBP eCLIP23.42■■□□□ 1.34
C19orf47-201ENST00000357884 FKBP8Q14318 412 aa23.42■■□□□ 1.34
C19orf47-201ENST00000357884 MADDQ8WXG6 1647 aa23.41■■□□□ 1.34
C19orf47-201ENST00000357884 FBXO31Q5XUX0 539 aaPredicted RBP23.4■■□□□ 1.34
C19orf47-201ENST00000357884 CEBPAP49715 358 aaPredicted RBP23.4■■□□□ 1.34
C19orf47-201ENST00000357884 PIK3C2BO00750 1634 aa23.39■■□□□ 1.34
C19orf47-201ENST00000357884 KTN1Q86UP2 1357 aaKnown RBP23.39■■□□□ 1.33
C19orf47-201ENST00000357884 ADAMTSL3P82987 1691 aa23.38■■□□□ 1.33
C19orf47-201ENST00000357884 SLC52A1Q9NWF4 448 aa23.37■■□□□ 1.33
C19orf47-201ENST00000357884 SYNMO15061 1565 aa23.37■■□□□ 1.33
C19orf47-201ENST00000357884 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
C19orf47-201ENST00000357884 ERICH6BQ5W0A0 696 aa23.36■■□□□ 1.33
C19orf47-201ENST00000357884 MRS2Q9HD23 443 aa23.36■■□□□ 1.33
C19orf47-201ENST00000357884 RIMS1Q86UR5 1692 aaKnown RBP23.36■■□□□ 1.33
C19orf47-201ENST00000357884 ZBED9Q6R2W3 1325 aa23.35■■□□□ 1.33
C19orf47-201ENST00000357884 MROH2AA6NES4 1674 aa23.34■■□□□ 1.33
C19orf47-201ENST00000357884 IFT172Q9UG01 1749 aa23.33■■□□□ 1.33
C19orf47-201ENST00000357884 NRXN1Q9ULB1 1477 aa23.33■■□□□ 1.33
C19orf47-201ENST00000357884 PREX1Q8TCU6 1659 aa23.33■■□□□ 1.33
C19orf47-201ENST00000357884 KIAA1210Q9ULL0 1709 aa23.33■■□□□ 1.33
C19orf47-201ENST00000357884 NBPF1Q3BBV0 1214 aa23.32■■□□□ 1.32
C19orf47-201ENST00000357884 CCDC184Q52MB2 194 aa23.32■■□□□ 1.32
C19orf47-201ENST00000357884 ERVK-7P63135 1459 aa23.32■■□□□ 1.32
C19orf47-201ENST00000357884 C3P01024 1663 aa23.31■■□□□ 1.32
C19orf47-201ENST00000357884 ST20-MTHFSA0A0A6YYL1 179 aa23.29■■□□□ 1.32
C19orf47-201ENST00000357884 KDM4FA0A1W2PPD8 638 aa23.28■■□□□ 1.32
C19orf47-201ENST00000357884 CHGAP10645 457 aaKnown RBP23.27■■□□□ 1.32
C19orf47-201ENST00000357884 SPATA31D1Q6ZQQ2 1576 aa23.26■■□□□ 1.31
C19orf47-201ENST00000357884 IDI1Q13907 227 aa23.26■■□□□ 1.31
C19orf47-201ENST00000357884 PPLO60437 1756 aa23.24■■□□□ 1.31
C19orf47-201ENST00000357884 PTPRMP28827 1452 aa23.24■■□□□ 1.31
C19orf47-201ENST00000357884 SCAF11Q99590 1463 aaKnown RBP23.24■■□□□ 1.31
C19orf47-201ENST00000357884 ADGRF5Q8IZF2 1346 aa23.24■■□□□ 1.31
C19orf47-201ENST00000357884 TSHZ2Q9NRE2 1034 aa23.23■■□□□ 1.31
C19orf47-201ENST00000357884 TNRQ92752 1358 aa23.23■■□□□ 1.31
C19orf47-201ENST00000357884 RALBP1Q15311 655 aa23.22■■□□□ 1.31
C19orf47-201ENST00000357884 FAM9BQ8IZU0 186 aa23.22■■□□□ 1.31
C19orf47-201ENST00000357884 PIK3C2GO75747 1445 aa23.22■■□□□ 1.31
C19orf47-201ENST00000357884 ZFYVE9O95405 1425 aa23.22■■□□□ 1.31
C19orf47-201ENST00000357884 IQGAP1P46940 1657 aa23.22■■□□□ 1.31
C19orf47-201ENST00000357884 EIF3AQ14152 1382 aaKnown RBP23.21■■□□□ 1.31
C19orf47-201ENST00000357884 NEXMIFQ5QGS0 1516 aa23.21■■□□□ 1.31
C19orf47-201ENST00000357884 VGFO15240 615 aaPredicted RBP23.2■■□□□ 1.3
C19orf47-201ENST00000357884 SETBP1Q9Y6X0 1596 aa23.2■■□□□ 1.3
C19orf47-201ENST00000357884 TMEM131LA2VDJ0 1609 aa23.2■■□□□ 1.3
C19orf47-201ENST00000357884 STAG3Q9UJ98 1225 aa23.19■■□□□ 1.3
C19orf47-201ENST00000357884 BRD4O60885 1362 aaPredicted RBP23.19■■□□□ 1.3
C19orf47-201ENST00000357884 SLC24A1O60721 1099 aa23.17■■□□□ 1.3
C19orf47-201ENST00000357884 TESK2Q96S53 571 aa23.17■■□□□ 1.3
C19orf47-201ENST00000357884 CFAP70Q5T0N1 1121 aa23.16■■□□□ 1.3
C19orf47-201ENST00000357884 C14orf93Q9H972 538 aaKnown RBP23.16■■□□□ 1.3
C19orf47-201ENST00000357884 BCANQ96GW7 911 aa23.15■■□□□ 1.3
C19orf47-201ENST00000357884 MYBBP1AQ9BQG0 1328 aaKnown RBP23.15■■□□□ 1.3
C19orf47-201ENST00000357884 SMG6Q86US8 1419 aaKnown RBP23.14■■□□□ 1.29
C19orf47-201ENST00000357884 PNISRQ8TF01 805 aaKnown RBP23.14■■□□□ 1.29
C19orf47-201ENST00000357884 SETD1BQ9UPS6 1966 aaKnown RBP23.13■■□□□ 1.29
C19orf47-201ENST00000357884 TMF1P82094 1093 aa23.13■■□□□ 1.29
C19orf47-201ENST00000357884 LRPPRCP42704 1394 aaKnown RBP23.13■■□□□ 1.29
C19orf47-201ENST00000357884 POLR3GLQ9BT43 218 aa23.12■■□□□ 1.29
C19orf47-201ENST00000357884 INSRP06213 1382 aa23.1■■□□□ 1.29
C19orf47-201ENST00000357884 NLRP1Q9C000 1473 aa23.1■■□□□ 1.29
C19orf47-201ENST00000357884 PARD3Q8TEW0 1356 aa23.09■■□□□ 1.29
C19orf47-201ENST00000357884 MYT1Q01538 1121 aa23.09■■□□□ 1.29
C19orf47-201ENST00000357884 TMC1Q8TDI8 760 aa23.09■■□□□ 1.29
C19orf47-201ENST00000357884 A2ML1A8K2U0 1454 aa23.09■■□□□ 1.29
C19orf47-201ENST00000357884 ADGRB1O14514 1584 aa23.09■■□□□ 1.29
C19orf47-201ENST00000357884 CDCA8Q53HL2 280 aa23.08■■□□□ 1.29
C19orf47-201ENST00000357884 MYO5BQ9ULV0 1848 aa23.08■■□□□ 1.29
C19orf47-201ENST00000357884 DISP3Q9P2K9 1392 aa23.07■■□□□ 1.28
C19orf47-201ENST00000357884 SBNO2Q9Y2G9 1366 aa23.07■■□□□ 1.28
C19orf47-201ENST00000357884 MYO3AQ8NEV4 1616 aa23.06■■□□□ 1.28
C19orf47-201ENST00000357884 PER1O15534 1290 aaPredicted RBP23.06■■□□□ 1.28
C19orf47-201ENST00000357884 PPP4R2Q9NY27 417 aa23.05■■□□□ 1.28
C19orf47-201ENST00000357884 KDM5AP29375 1690 aaKnown RBP23.05■■□□□ 1.28
C19orf47-201ENST00000357884 NUTM2DQ5VT03 806 aaPredicted RBP23.04■■□□□ 1.28
C19orf47-201ENST00000357884 NLRP13Q86W25 1043 aa23.04■■□□□ 1.28
C19orf47-201ENST00000357884 THEMISQ8N1K5 641 aaPredicted RBP23.02■■□□□ 1.28
C19orf47-201ENST00000357884 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
C19orf47-201ENST00000357884 UBR1Q8IWV7 1749 aa23.02■■□□□ 1.28
C19orf47-201ENST00000357884 RNF123Q5XPI4 1314 aa23.02■■□□□ 1.28
C19orf47-201ENST00000357884 CEP170BQ9Y4F5 1589 aaPredicted RBP23.01■■□□□ 1.27
C19orf47-201ENST00000357884 RIMS2Q9UQ26 1411 aa23■■□□□ 1.27
C19orf47-201ENST00000357884 ABCF1Q8NE71 845 aaKnown RBP eCLIP23■■□□□ 1.27
C19orf47-201ENST00000357884 HDGFP51858 240 aaKnown RBP22.99■■□□□ 1.27
C19orf47-201ENST00000357884 CENPJQ9HC77 1338 aaPredicted RBP22.98■■□□□ 1.27
C19orf47-201ENST00000357884 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
C19orf47-201ENST00000357884 TMEM2Q9UHN6 1383 aa22.95■■□□□ 1.26
C19orf47-201ENST00000357884 ZNF142P52746 1687 aaPredicted RBP22.94■■□□□ 1.26
C19orf47-201ENST00000357884 TMEM132EQ6IEE7 984 aa22.94■■□□□ 1.26
C19orf47-201ENST00000357884 TXNDC2Q86VQ3 553 aa22.93■■□□□ 1.26
C19orf47-201ENST00000357884 TRAK1Q9UPV9 953 aa22.93■■□□□ 1.26
C19orf47-201ENST00000357884 EID1Q9Y6B2 187 aa22.93■■□□□ 1.26
C19orf47-201ENST00000357884 ALKQ9UM73 1620 aa22.93■■□□□ 1.26
C19orf47-201ENST00000357884 ASXL1Q8IXJ9 1541 aa22.92■■□□□ 1.26
C19orf47-201ENST00000357884 PDE3BQ13370 1112 aa22.91■■□□□ 1.26
C19orf47-201ENST00000357884 LTKP29376 864 aa22.91■■□□□ 1.26
C19orf47-201ENST00000357884 HSPA2P54652 639 aa22.89■■□□□ 1.25
C19orf47-201ENST00000357884 PUS7Q96PZ0 661 aaKnown RBP22.89■■□□□ 1.25
C19orf47-201ENST00000357884 PANK3Q9H999 370 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms