RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 SYCP2Q9BX26 1530 aa19.01■□□□□ 0.63
TOP3B-201ENST00000357179 PANK3Q9H999 370 aa19■□□□□ 0.63
TOP3B-201ENST00000357179 RRP9O43818 475 aaKnown RBP18.99■□□□□ 0.63
TOP3B-201ENST00000357179 RGL3Q3MIN7 710 aa18.99■□□□□ 0.63
TOP3B-201ENST00000357179 CC2D1BQ5T0F9 858 aaKnown RBP18.98■□□□□ 0.63
TOP3B-201ENST00000357179 DUOX2Q9NRD8 1548 aa18.98■□□□□ 0.63
TOP3B-201ENST00000357179 HSP90AA2PQ14568 343 aaPredicted RBP18.98■□□□□ 0.63
TOP3B-201ENST00000357179 C20orf194Q5TEA3 1177 aa18.96■□□□□ 0.63
TOP3B-201ENST00000357179 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
TOP3B-201ENST00000357179 CLCN1P35523 988 aa18.95■□□□□ 0.62
TOP3B-201ENST00000357179 NAP1L5Q96NT1 182 aaPredicted RBP18.95■□□□□ 0.62
TOP3B-201ENST00000357179 TTC37Q6PGP7 1564 aa18.94■□□□□ 0.62
TOP3B-201ENST00000357179 PNNQ9H307 717 aaKnown RBP18.94■□□□□ 0.62
TOP3B-201ENST00000357179 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
TOP3B-201ENST00000357179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.94■□□□□ 0.625e-7■□□□□ 8.9
TOP3B-201ENST00000357179 HSP90AA1P07900 732 aaKnown RBP18.93■□□□□ 0.62
TOP3B-201ENST00000357179 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
TOP3B-201ENST00000357179 VIRMAQ69YN4 1812 aaKnown RBP18.93■□□□□ 0.62
TOP3B-201ENST00000357179 IQGAP1P46940 1657 aa18.91■□□□□ 0.62
TOP3B-201ENST00000357179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.624e-7■■■□□ 14.6
TOP3B-201ENST00000357179 SYNMO15061 1565 aa18.9■□□□□ 0.62
TOP3B-201ENST00000357179 ADAMTS8Q9UP79 889 aa18.9■□□□□ 0.62
TOP3B-201ENST00000357179 USP19O94966 1318 aa18.9■□□□□ 0.62
TOP3B-201ENST00000357179 STAC3Q96MF2 364 aa18.89■□□□□ 0.61
TOP3B-201ENST00000357179 MADDQ8WXG6 1647 aa18.89■□□□□ 0.61
TOP3B-201ENST00000357179 ZNF521Q96K83 1311 aa18.89■□□□□ 0.61
TOP3B-201ENST00000357179 XRCC6P12956 609 aaKnown RBP eCLIP18.88■□□□□ 0.612e-7■■■□□ 15.7
TOP3B-201ENST00000357179 PIK3C2GO75747 1445 aa18.88■□□□□ 0.61
TOP3B-201ENST00000357179 PPP2R1AP30153 589 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 CDCA8Q53HL2 280 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 DUSP27Q5VZP5 1158 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 NPC1L1Q9UHC9 1359 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 FSD2A1L4K1 749 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 RGS3P49796 1198 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
TOP3B-201ENST00000357179 SCAPERQ9BY12 1400 aa18.86■□□□□ 0.61
TOP3B-201ENST00000357179 PLEKHH1Q9ULM0 1364 aa18.86■□□□□ 0.61
TOP3B-201ENST00000357179 WDR43Q15061 677 aaKnown RBP eCLIP18.86■□□□□ 0.61
TOP3B-201ENST00000357179 BECN1Q14457 450 aa18.85■□□□□ 0.61
TOP3B-201ENST00000357179 AMER1Q5JTC6 1135 aaPredicted RBP18.85■□□□□ 0.61
TOP3B-201ENST00000357179 ANTXR1Q9H6X2 564 aa18.84■□□□□ 0.61
TOP3B-201ENST00000357179 ASXL1Q8IXJ9 1541 aa18.84■□□□□ 0.61
TOP3B-201ENST00000357179 SPHKAPQ2M3C7 1700 aa18.84■□□□□ 0.61
TOP3B-201ENST00000357179 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
TOP3B-201ENST00000357179 SHROOM2Q13796 1616 aa18.84■□□□□ 0.61
TOP3B-201ENST00000357179 GOLGA2Q08379 1002 aa18.83■□□□□ 0.61
TOP3B-201ENST00000357179 GOLGA6L3A6NEY3 463 aa18.83■□□□□ 0.6
TOP3B-201ENST00000357179 TRPM2O94759 1503 aa18.83■□□□□ 0.6
TOP3B-201ENST00000357179 ABCC2Q92887 1545 aa18.82■□□□□ 0.6
TOP3B-201ENST00000357179 EIF3AQ14152 1382 aaKnown RBP18.82■□□□□ 0.6
TOP3B-201ENST00000357179 SLKQ9H2G2 1235 aaPredicted RBP18.81■□□□□ 0.6
TOP3B-201ENST00000357179 CEP152O94986 1710 aa18.81■□□□□ 0.6
TOP3B-201ENST00000357179 PLCH2O75038 1416 aa18.8■□□□□ 0.6
TOP3B-201ENST00000357179 TRMT2AQ8IZ69 625 aaKnown RBP18.8■□□□□ 0.6
TOP3B-201ENST00000357179 SLFN5Q08AF3 891 aa18.79■□□□□ 0.6
TOP3B-201ENST00000357179 PTPRTO14522 1441 aa18.79■□□□□ 0.6
TOP3B-201ENST00000357179 MYOM1P52179 1685 aa18.79■□□□□ 0.6
TOP3B-201ENST00000357179 PANK2Q9BZ23 570 aa18.79■□□□□ 0.6
TOP3B-201ENST00000357179 ABCC1P33527 1531 aa18.78■□□□□ 0.6
TOP3B-201ENST00000357179 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
TOP3B-201ENST00000357179 NLRP1Q9C000 1473 aa18.78■□□□□ 0.6
TOP3B-201ENST00000357179 NEURL4Q96JN8 1562 aa18.77■□□□□ 0.6
TOP3B-201ENST00000357179 NGEFQ8N5V2 710 aa18.77■□□□□ 0.6
TOP3B-201ENST00000357179 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
TOP3B-201ENST00000357179 RTEL1-TNFRSF6BF6WH68 1400 aa18.75■□□□□ 0.59
TOP3B-201ENST00000357179 SEC24BO95487 1268 aa18.75■□□□□ 0.59
TOP3B-201ENST00000357179 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
TOP3B-201ENST00000357179 NKTRP30414 1462 aaKnown RBP18.75■□□□□ 0.59
TOP3B-201ENST00000357179 KDM5AP29375 1690 aaKnown RBP18.74■□□□□ 0.59
TOP3B-201ENST00000357179 ARXQ96QS3 562 aa18.74■□□□□ 0.59
TOP3B-201ENST00000357179 DEPDC5O75140 1603 aa18.73■□□□□ 0.59
TOP3B-201ENST00000357179 CLTCL1P53675 1640 aa18.73■□□□□ 0.59
TOP3B-201ENST00000357179 CHD1O14646 1710 aa18.72■□□□□ 0.59
TOP3B-201ENST00000357179 MRE11P49959 708 aa18.72■□□□□ 0.59
TOP3B-201ENST00000357179 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
TOP3B-201ENST00000357179 TET3O43151 1660 aa18.71■□□□□ 0.59
TOP3B-201ENST00000357179 MCM4P33991 863 aa18.71■□□□□ 0.59
TOP3B-201ENST00000357179 ESPNB1AK53 854 aa18.71■□□□□ 0.59
TOP3B-201ENST00000357179 ARAP3Q8WWN8 1544 aa18.71■□□□□ 0.59
TOP3B-201ENST00000357179 TRAPPC8Q9Y2L5 1435 aa18.71■□□□□ 0.58
TOP3B-201ENST00000357179 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
TOP3B-201ENST00000357179 NINLQ9Y2I6 1382 aa18.7■□□□□ 0.58
TOP3B-201ENST00000357179 E9PSI1 815 aa18.7■□□□□ 0.58
TOP3B-201ENST00000357179 TPM2P07951 284 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 PODXL2Q9NZ53 605 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 ZFYVE16Q7Z3T8 1539 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 TBC1D2Q9BYX2 928 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 PDCL3Q9H2J4 239 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 UHRF1BP1LA0JNW5 1464 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 IGHDP01880 384 aa18.67■□□□□ 0.58
TOP3B-201ENST00000357179 GZF1Q9H116 711 aaPredicted RBP18.67■□□□□ 0.58
TOP3B-201ENST00000357179 ERBB4Q15303 1308 aa18.67■□□□□ 0.58
TOP3B-201ENST00000357179 ZCCHC11Q5TAX3 1644 aaKnown RBP18.67■□□□□ 0.58
TOP3B-201ENST00000357179 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
TOP3B-201ENST00000357179 MYOM2P54296 1465 aa18.67■□□□□ 0.58
TOP3B-201ENST00000357179 SPAG9O60271 1321 aaKnown RBP18.66■□□□□ 0.58
TOP3B-201ENST00000357179 TBC1D32Q96NH3 1257 aa18.66■□□□□ 0.58
TOP3B-201ENST00000357179 APAF1O14727 1248 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms