RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 MCTP1Q6DN14 999 aa7.94□□□□□ -1.14
TTC3-201ENST00000354749 ACBD3Q9H3P7 528 aa7.94□□□□□ -1.14
TTC3-201ENST00000354749 EVC2Q86UK5 1308 aa7.94□□□□□ -1.14
TTC3-201ENST00000354749 NASPP49321 788 aaPredicted RBP7.94□□□□□ -1.14
TTC3-201ENST00000354749 RNF20Q5VTR2 975 aa7.94□□□□□ -1.14
TTC3-201ENST00000354749 INTS3Q68E01 1043 aaKnown RBP7.94□□□□□ -1.14
TTC3-201ENST00000354749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.94□□□□□ -1.142e-6■■■■□ 21.8
TTC3-201ENST00000354749 CPLX2Q6PUV4 134 aaKnown RBP7.94□□□□□ -1.14
TTC3-201ENST00000354749 HOMER1Q86YM7 354 aa7.94□□□□□ -1.14
TTC3-201ENST00000354749 C22orf23Q9BZE7 217 aa7.94□□□□□ -1.14
TTC3-201ENST00000354749 CCDC7Q96M83 1385 aa7.93□□□□□ -1.14
TTC3-201ENST00000354749 KIF3BO15066 747 aa7.93□□□□□ -1.14
TTC3-201ENST00000354749 AMPHP49418 695 aa7.93□□□□□ -1.14
TTC3-201ENST00000354749 AKAP17AQ02040 695 aaKnown RBP7.93□□□□□ -1.14
TTC3-201ENST00000354749 TMX4Q9H1E5 349 aaPredicted RBP7.93□□□□□ -1.14
TTC3-201ENST00000354749 BICD2Q8TD16 824 aa7.93□□□□□ -1.14
TTC3-201ENST00000354749 IFT57Q9NWB7 429 aa7.93□□□□□ -1.14
TTC3-201ENST00000354749 ANO2Q9NQ90 1003 aa7.93□□□□□ -1.14
TTC3-201ENST00000354749 HSP90B2PQ58FF3 399 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 BRD4O60885 1362 aaPredicted RBP7.92□□□□□ -1.14
TTC3-201ENST00000354749 TDRD9Q8NDG6 1382 aaKnown RBP7.92□□□□□ -1.14
TTC3-201ENST00000354749 CPLX1O14810 134 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 CCDC73Q6ZRK6 1079 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 NAT10Q9H0A0 1025 aaKnown RBP7.92□□□□□ -1.14
TTC3-201ENST00000354749 CDC45O75419 566 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 WIZO95785 1651 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 SYNE3Q6ZMZ3 975 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 MNS1Q8NEH6 495 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 COG3Q96JB2 828 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 HMGN5P82970 282 aaKnown RBP7.92□□□□□ -1.14
TTC3-201ENST00000354749 FOXD4L6Q3SYB3 417 aaPredicted RBP7.92□□□□□ -1.14
TTC3-201ENST00000354749 FOXD4L3Q6VB84 417 aaPredicted RBP7.92□□□□□ -1.14
TTC3-201ENST00000354749 MARCH6O60337 910 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 CDR1P51861 262 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 PDE4CQ08493 712 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 TRIM29Q14134 588 aa7.92□□□□□ -1.14
TTC3-201ENST00000354749 AK7Q96M32 723 aa7.91□□□□□ -1.14
TTC3-201ENST00000354749 MIA2Q96PC5 1412 aa7.91□□□□□ -1.14
TTC3-201ENST00000354749 WASHC2CQ9Y4E1 1318 aa7.91□□□□□ -1.14
TTC3-201ENST00000354749 MBD3O95983 291 aa7.91□□□□□ -1.14
TTC3-201ENST00000354749 KIF7Q2M1P5 1343 aa7.91□□□□□ -1.14
TTC3-201ENST00000354749 NEXNQ0ZGT2 675 aa7.91□□□□□ -1.14
TTC3-201ENST00000354749 CWC15Q9P013 229 aaKnown RBP7.91□□□□□ -1.14
TTC3-201ENST00000354749 APAF1O14727 1248 aa7.91□□□□□ -1.14
TTC3-201ENST00000354749 NGDNQ8NEJ9 315 aaKnown RBP7.91□□□□□ -1.14
TTC3-201ENST00000354749 MYOM3Q5VTT5 1437 aa7.9□□□□□ -1.14
TTC3-201ENST00000354749 VPS37CA5D8V6 355 aaPredicted RBP7.9□□□□□ -1.14
TTC3-201ENST00000354749 SMC3Q9UQE7 1217 aa7.9□□□□□ -1.14
TTC3-201ENST00000354749 IFIT2P09913 472 aaKnown RBP7.9□□□□□ -1.14
TTC3-201ENST00000354749 SASS6Q6UVJ0 657 aa7.9□□□□□ -1.14
TTC3-201ENST00000354749 CCDC47Q96A33 483 aaKnown RBP7.9□□□□□ -1.14
TTC3-201ENST00000354749 NINLQ9Y2I6 1382 aa7.9□□□□□ -1.14
TTC3-201ENST00000354749 FGD6Q6ZV73 1430 aa7.9□□□□□ -1.14
TTC3-201ENST00000354749 CCDC66A2RUB6 948 aa7.9□□□□□ -1.14
TTC3-201ENST00000354749 HNRNPMP52272 730 aaKnown RBP eCLIP7.9□□□□□ -1.144e-7■■■■□ 25.8
TTC3-201ENST00000354749 RUFY1Q96T51 708 aa7.9□□□□□ -1.14
TTC3-201ENST00000354749 LETM1O95202 739 aaPredicted RBP7.9□□□□□ -1.15
TTC3-201ENST00000354749 RUNDC1Q96C34 613 aa7.9□□□□□ -1.15
TTC3-201ENST00000354749 HSP90AB4PQ58FF6 505 aa7.9□□□□□ -1.15
TTC3-201ENST00000354749 VPS53Q5VIR6 699 aa7.9□□□□□ -1.15
TTC3-201ENST00000354749 ERC2O15083 957 aa7.89□□□□□ -1.15
TTC3-201ENST00000354749 EID1Q9Y6B2 187 aa7.89□□□□□ -1.15
TTC3-201ENST00000354749 CCP110O43303 1012 aa7.89□□□□□ -1.15
TTC3-201ENST00000354749 CCDC173Q0VFZ6 552 aa7.89□□□□□ -1.15
TTC3-201ENST00000354749 C9orf78Q9NZ63 289 aaPredicted RBP7.89□□□□□ -1.15
TTC3-201ENST00000354749 GNAI1P63096 354 aa7.89□□□□□ -1.15
TTC3-201ENST00000354749 DIAPH1O60610 1272 aaKnown RBP7.89□□□□□ -1.15
TTC3-201ENST00000354749 ELL2O00472 640 aaPredicted RBP7.88□□□□□ -1.15
TTC3-201ENST00000354749 VGFO15240 615 aaPredicted RBP7.88□□□□□ -1.15
TTC3-201ENST00000354749 TRAK1Q9UPV9 953 aa7.88□□□□□ -1.15
TTC3-201ENST00000354749 CALRP27797 417 aaKnown RBP7.88□□□□□ -1.15
TTC3-201ENST00000354749 FRAT2O75474 233 aaPredicted RBP7.88□□□□□ -1.15
TTC3-201ENST00000354749 STAC3Q96MF2 364 aa7.88□□□□□ -1.15
TTC3-201ENST00000354749 RABEP1Q15276 862 aa7.88□□□□□ -1.15
TTC3-201ENST00000354749 PCMTD1Q96MG8 357 aaPredicted RBP7.88□□□□□ -1.15
TTC3-201ENST00000354749 DHX8Q14562 1220 aaKnown RBP7.87□□□□□ -1.15
TTC3-201ENST00000354749 ERCC4Q92889 916 aaPredicted RBP7.87□□□□□ -1.15
TTC3-201ENST00000354749 C1orf141Q5JVX7 400 aa7.87□□□□□ -1.15
TTC3-201ENST00000354749 RIPK4P57078 832 aa7.87□□□□□ -1.15
TTC3-201ENST00000354749 R3HCC1Q9Y3T6 440 aaKnown RBP7.87□□□□□ -1.15
TTC3-201ENST00000354749 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.87□□□□□ -1.15
TTC3-201ENST00000354749 BRPF3Q9ULD4 1205 aa7.87□□□□□ -1.15
TTC3-201ENST00000354749 AMOTL1Q8IY63 956 aa7.87□□□□□ -1.15
TTC3-201ENST00000354749 TEFQ10587 303 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 TRDNQ13061 729 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 TTC5Q8N0Z6 440 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 PATL2C9JE40 543 aaKnown RBP7.86□□□□□ -1.15
TTC3-201ENST00000354749 TRAK2O60296 914 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 CADPSQ9ULU8 1353 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 DCTN1Q14203 1278 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 G3BP1Q13283 466 aaKnown RBP eCLIP7.86□□□□□ -1.15
TTC3-201ENST00000354749 TSPY26PQ9H489 355 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 SAFBQ15424 915 aaKnown RBP eCLIP7.86□□□□□ -1.15
TTC3-201ENST00000354749 NUTM2DQ5VT03 806 aaPredicted RBP7.86□□□□□ -1.15
TTC3-201ENST00000354749 PRM3Q9NNZ6 103 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 MCM2P49736 904 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 LTV1Q96GA3 475 aaPredicted RBP7.86□□□□□ -1.15
TTC3-201ENST00000354749 FYCO1Q9BQS8 1478 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 PDCP20941 246 aa7.86□□□□□ -1.15
TTC3-201ENST00000354749 PANK1Q8TE04 598 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms