RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 NUTM2EB1AL46 878 aaPredicted RBP25.02■■□□□ 1.6
DDX55-202ENST00000354291 PPP1R15AO75807 674 aaPredicted RBP25.02■■□□□ 1.6
DDX55-202ENST00000354291 NUTM2AQ8IVF1 878 aaPredicted RBP25.02■■□□□ 1.6
DDX55-202ENST00000354291 SLC52A1Q9NWF4 448 aa25.01■■□□□ 1.59
DDX55-202ENST00000354291 NWD1Q149M9 1564 aa24.99■■□□□ 1.59
DDX55-202ENST00000354291 FGD6Q6ZV73 1430 aa24.99■■□□□ 1.59
DDX55-202ENST00000354291 CHIC2Q9UKJ5 165 aa24.99■■□□□ 1.59
DDX55-202ENST00000354291 COL16A1Q07092 1604 aaPredicted RBP24.98■■□□□ 1.59
DDX55-202ENST00000354291 ABCC5O15440 1437 aa24.98■■□□□ 1.59
DDX55-202ENST00000354291 ATF3P18847 181 aa24.98■■□□□ 1.59
DDX55-202ENST00000354291 HDGFP51858 240 aaKnown RBP24.98■■□□□ 1.59
DDX55-202ENST00000354291 CADPS2Q86UW7 1296 aa24.97■■□□□ 1.59
DDX55-202ENST00000354291 KDM5AP29375 1690 aaKnown RBP24.96■■□□□ 1.59
DDX55-202ENST00000354291 C19orf44Q9H6X5 657 aa24.94■■□□□ 1.58
DDX55-202ENST00000354291 TBX22Q9Y458 520 aa24.94■■□□□ 1.58
DDX55-202ENST00000354291 NOS1P29475 1434 aa24.94■■□□□ 1.58
DDX55-202ENST00000354291 PLEKHG1Q9ULL1 1385 aa24.93■■□□□ 1.58
DDX55-202ENST00000354291 ADGRB3O60242 1522 aa24.93■■□□□ 1.58
DDX55-202ENST00000354291 AFF2P51816 1311 aa24.91■■□□□ 1.58
DDX55-202ENST00000354291 CHGAP10645 457 aaKnown RBP24.91■■□□□ 1.58
DDX55-202ENST00000354291 LMTK2Q8IWU2 1503 aa24.91■■□□□ 1.58
DDX55-202ENST00000354291 RIMS2Q9UQ26 1411 aa24.9■■□□□ 1.58
DDX55-202ENST00000354291 NCOA3Q9Y6Q9 1424 aa24.9■■□□□ 1.58
DDX55-202ENST00000354291 NUTM2DQ5VT03 806 aaPredicted RBP24.9■■□□□ 1.58
DDX55-202ENST00000354291 VPS8Q8N3P4 1428 aa24.89■■□□□ 1.58
DDX55-202ENST00000354291 BRINP3Q76B58 766 aa24.88■■□□□ 1.57
DDX55-202ENST00000354291 ANKRD30AQ9BXX3 1397 aa24.88■■□□□ 1.57
DDX55-202ENST00000354291 CHD2O14647 1828 aaKnown RBP24.88■■□□□ 1.57
DDX55-202ENST00000354291 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
DDX55-202ENST00000354291 DAPK1P53355 1430 aa24.86■■□□□ 1.57
DDX55-202ENST00000354291 QTRT2Q9H974 415 aaKnown RBP24.86■■□□□ 1.57
DDX55-202ENST00000354291 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
DDX55-202ENST00000354291 CDK12Q9NYV4 1490 aaPredicted RBP24.84■■□□□ 1.57
DDX55-202ENST00000354291 AHDC1Q5TGY3 1603 aaPredicted RBP24.84■■□□□ 1.57
DDX55-202ENST00000354291 C8orf37Q96NL8 207 aa24.83■■□□□ 1.57
DDX55-202ENST00000354291 SHPRHQ149N8 1683 aa24.82■■□□□ 1.56
DDX55-202ENST00000354291 RBM6P78332 1123 aaKnown RBP24.82■■□□□ 1.56
DDX55-202ENST00000354291 AMOTL2Q9Y2J4 779 aa24.81■■□□□ 1.56
DDX55-202ENST00000354291 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.81■■□□□ 1.56
DDX55-202ENST00000354291 CROCC2H7BZ55 1655 aa24.8■■□□□ 1.56
DDX55-202ENST00000354291 PTPN23Q9H3S7 1636 aa24.79■■□□□ 1.56
DDX55-202ENST00000354291 LRRC59Q96AG4 307 aaKnown RBP24.78■■□□□ 1.56
DDX55-202ENST00000354291 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
DDX55-202ENST00000354291 ADAMTS13Q76LX8 1427 aa24.77■■□□□ 1.56
DDX55-202ENST00000354291 APLP2Q06481 763 aa24.76■■□□□ 1.55
DDX55-202ENST00000354291 RGS12O14924 1447 aa24.76■■□□□ 1.55
DDX55-202ENST00000354291 MYO5BQ9ULV0 1848 aa24.75■■□□□ 1.55
DDX55-202ENST00000354291 DDX17Q92841 729 aaKnown RBP24.74■■□□□ 1.55
DDX55-202ENST00000354291 NGLY1Q96IV0 654 aa24.74■■□□□ 1.55
DDX55-202ENST00000354291 PIK3R4Q99570 1358 aa24.74■■□□□ 1.55
DDX55-202ENST00000354291 DIP2AQ14689 1571 aa24.74■■□□□ 1.55
DDX55-202ENST00000354291 RPRD2Q5VT52 1461 aaKnown RBP24.73■■□□□ 1.55
DDX55-202ENST00000354291 SETD5Q9C0A6 1442 aa24.72■■□□□ 1.55
DDX55-202ENST00000354291 ADAMTS2O95450 1211 aa24.72■■□□□ 1.55
DDX55-202ENST00000354291 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
DDX55-202ENST00000354291 GCC2Q8IWJ2 1684 aa24.7■■□□□ 1.54
DDX55-202ENST00000354291 ZRANB1Q9UGI0 708 aa24.7■■□□□ 1.54
DDX55-202ENST00000354291 PTPRUQ92729 1446 aa24.69■■□□□ 1.54
DDX55-202ENST00000354291 ASXL1Q8IXJ9 1541 aa24.68■■□□□ 1.54
DDX55-202ENST00000354291 FOXD1Q16676 465 aa24.68■■□□□ 1.54
DDX55-202ENST00000354291 ANKRD50Q9ULJ7 1429 aa24.67■■□□□ 1.54
DDX55-202ENST00000354291 FAM50AQ14320 339 aaKnown RBP24.66■■□□□ 1.54
DDX55-202ENST00000354291 ATAD2Q6PL18 1390 aa24.66■■□□□ 1.54
DDX55-202ENST00000354291 PNPLA6Q8IY17 1366 aa24.65■■□□□ 1.54
DDX55-202ENST00000354291 MST1RQ04912 1400 aa24.64■■□□□ 1.54
DDX55-202ENST00000354291 DCCP43146 1447 aa24.63■■□□□ 1.53
DDX55-202ENST00000354291 TRPM2O94759 1503 aa24.63■■□□□ 1.53
DDX55-202ENST00000354291 USP21Q9UK80 565 aa24.63■■□□□ 1.53
DDX55-202ENST00000354291 ADGRL2O95490 1459 aa24.59■■□□□ 1.53
DDX55-202ENST00000354291 TRPC5Q9UL62 973 aaPredicted RBP24.59■■□□□ 1.53
DDX55-202ENST00000354291 NHSL1Q5SYE7 1610 aa24.55■■□□□ 1.52
DDX55-202ENST00000354291 ZNF326Q5BKZ1 582 aaKnown RBP24.55■■□□□ 1.52
DDX55-202ENST00000354291 METP08581 1390 aa24.54■■□□□ 1.52
DDX55-202ENST00000354291 EP400Q96L91 3159 aa24.53■■□□□ 1.52
DDX55-202ENST00000354291 UNC13BO14795 1591 aa24.51■■□□□ 1.51
DDX55-202ENST00000354291 SETBP1Q9Y6X0 1596 aa24.51■■□□□ 1.51
DDX55-202ENST00000354291 CCDC125Q86Z20 511 aa24.51■■□□□ 1.51
DDX55-202ENST00000354291 FNBP4Q8N3X1 1017 aaPredicted RBP24.51■■□□□ 1.51
DDX55-202ENST00000354291 ORAI2Q96SN7 254 aa24.5■■□□□ 1.51
DDX55-202ENST00000354291 ADGRL3Q9HAR2 1447 aa24.49■■□□□ 1.51
DDX55-202ENST00000354291 E9PCH4 1651 aa24.47■■□□□ 1.51
DDX55-202ENST00000354291 C1orf167Q5SNV9 1468 aa24.46■■□□□ 1.51
DDX55-202ENST00000354291 SOS2Q07890 1332 aaPredicted RBP24.46■■□□□ 1.51
DDX55-202ENST00000354291 XRN1Q8IZH2 1706 aaKnown RBP24.46■■□□□ 1.51
DDX55-202ENST00000354291 NUP155O75694 1391 aa24.45■■□□□ 1.5
DDX55-202ENST00000354291 ATRNO75882 1429 aa24.44■■□□□ 1.5
DDX55-202ENST00000354291 PTCH1Q13635 1447 aa24.43■■□□□ 1.5
DDX55-202ENST00000354291 NRXN3Q9Y4C0 1643 aa24.42■■□□□ 1.5
DDX55-202ENST00000354291 GJD4Q96KN9 370 aaPredicted RBP24.4■■□□□ 1.5
DDX55-202ENST00000354291 DEFB132Q7Z7B7 95 aa24.35■■□□□ 1.49
DDX55-202ENST00000354291 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
DDX55-202ENST00000354291 BCL9LQ86UU0 1499 aa24.34■■□□□ 1.49
DDX55-202ENST00000354291 ESCO1Q5FWF5 840 aa24.34■■□□□ 1.49
DDX55-202ENST00000354291 IQGAP3Q86VI3 1631 aa24.33■■□□□ 1.49
DDX55-202ENST00000354291 ITGAEP38570 1179 aa24.33■■□□□ 1.49
DDX55-202ENST00000354291 XPCQ01831 940 aaPredicted RBP24.32■■□□□ 1.48
DDX55-202ENST00000354291 ROBO2Q9HCK4 1378 aa24.31■■□□□ 1.48
DDX55-202ENST00000354291 SF3B2Q13435 895 aaKnown RBP24.31■■□□□ 1.48
DDX55-202ENST00000354291 NPHP3Q7Z494 1330 aa24.3■■□□□ 1.48
DDX55-202ENST00000354291 ROCK1Q13464 1354 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms