RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NUP155O75694 1391 aa9.72□□□□□ -0.85
BRCA1-201ENST00000352993 RAPGEF6Q8TEU7 1601 aa9.72□□□□□ -0.85
BRCA1-201ENST00000352993 GRPEL1Q9HAV7 217 aa9.71□□□□□ -0.85
BRCA1-201ENST00000352993 USP19O94966 1318 aa9.71□□□□□ -0.85
BRCA1-201ENST00000352993 PANK1Q8TE04 598 aa9.71□□□□□ -0.85
BRCA1-201ENST00000352993 KNSTRNQ9Y448 316 aa9.71□□□□□ -0.85
BRCA1-201ENST00000352993 SIGLEC1Q9BZZ2 1709 aa9.71□□□□□ -0.86
BRCA1-201ENST00000352993 ABCC5O15440 1437 aa9.71□□□□□ -0.86
BRCA1-201ENST00000352993 CDK13Q14004 1512 aaKnown RBP9.71□□□□□ -0.86
BRCA1-201ENST00000352993 MFAP1P55081 439 aaKnown RBP9.7□□□□□ -0.86
BRCA1-201ENST00000352993 KDM5CP41229 1560 aa9.7□□□□□ -0.86
BRCA1-201ENST00000352993 REREQ9P2R6 1566 aa9.7□□□□□ -0.86
BRCA1-201ENST00000352993 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
BRCA1-201ENST00000352993 RBM10P98175 930 aaKnown RBP9.7□□□□□ -0.86
BRCA1-201ENST00000352993 APAF1O14727 1248 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 NEUROD2Q15784 382 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 ANP32BQ92688 251 aaKnown RBP9.69□□□□□ -0.86
BRCA1-201ENST00000352993 CHMP5Q9NZZ3 219 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 LRRIQ1Q96JM4 1722 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 ROCK1Q13464 1354 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 A0A0U1RQG5 324 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-201ENST00000352993 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-201ENST00000352993 FBLN2P98095 1184 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 PLEKHH1Q9ULM0 1364 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 ADGRL1O94910 1474 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 CLUAP1Q96AJ1 413 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 ARHGEF40Q8TER5 1519 aa9.69□□□□□ -0.86
BRCA1-201ENST00000352993 ANTXR1Q9H6X2 564 aa9.68□□□□□ -0.86
BRCA1-201ENST00000352993 HECW2Q9P2P5 1572 aa9.68□□□□□ -0.86
BRCA1-201ENST00000352993 FSD2A1L4K1 749 aa9.68□□□□□ -0.86
BRCA1-201ENST00000352993 TMF1P82094 1093 aa9.68□□□□□ -0.86
BRCA1-201ENST00000352993 KIAA1211Q6ZU35 1233 aa9.68□□□□□ -0.86
BRCA1-201ENST00000352993 SLFN5Q08AF3 891 aa9.68□□□□□ -0.86
BRCA1-201ENST00000352993 HSCBQ8IWL3 235 aa9.68□□□□□ -0.86
BRCA1-201ENST00000352993 PZPP20742 1482 aa9.67□□□□□ -0.86
BRCA1-201ENST00000352993 PTPRGP23470 1445 aa9.67□□□□□ -0.86
BRCA1-201ENST00000352993 KIF14Q15058 1648 aa9.67□□□□□ -0.86
BRCA1-201ENST00000352993 RALGAPBQ86X10 1494 aa9.67□□□□□ -0.86
BRCA1-201ENST00000352993 CGNL1Q0VF96 1302 aa9.67□□□□□ -0.86
BRCA1-201ENST00000352993 TPM2P07951 284 aa9.67□□□□□ -0.86
BRCA1-201ENST00000352993 FAM13BQ9NYF5 915 aa9.67□□□□□ -0.86
BRCA1-201ENST00000352993 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
BRCA1-201ENST00000352993 TBC1D32Q96NH3 1257 aa9.66□□□□□ -0.86
BRCA1-201ENST00000352993 PDCL3Q9H2J4 239 aa9.66□□□□□ -0.86
BRCA1-201ENST00000352993 FOXD4L1Q9NU39 408 aa9.66□□□□□ -0.86
BRCA1-201ENST00000352993 ERBB4Q15303 1308 aa9.66□□□□□ -0.86
BRCA1-201ENST00000352993 BLMP54132 1417 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-201ENST00000352993 MSNP26038 577 aaKnown RBP9.66□□□□□ -0.86
BRCA1-201ENST00000352993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.66□□□□□ -0.861e-6■■■□□ 18.6
BRCA1-201ENST00000352993 BCL2L13Q9BXK5 485 aa9.66□□□□□ -0.86
BRCA1-201ENST00000352993 CENPJQ9HC77 1338 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-201ENST00000352993 NEO1Q92859 1461 aa9.66□□□□□ -0.86
BRCA1-201ENST00000352993 PPP2R1AP30153 589 aa9.66□□□□□ -0.86
BRCA1-201ENST00000352993 SPINK5Q9NQ38 1064 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-201ENST00000352993 PDZRN3Q9UPQ7 1066 aa9.65□□□□□ -0.86
BRCA1-201ENST00000352993 PLEKHH2Q8IVE3 1493 aa9.65□□□□□ -0.86
BRCA1-201ENST00000352993 MBD5Q9P267 1494 aa9.65□□□□□ -0.86
BRCA1-201ENST00000352993 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.86
BRCA1-201ENST00000352993 C22orf23Q9BZE7 217 aa9.65□□□□□ -0.86
BRCA1-201ENST00000352993 PMFBP1Q8TBY8 1022 aa9.64□□□□□ -0.87
BRCA1-201ENST00000352993 TTC37Q6PGP7 1564 aa9.64□□□□□ -0.87
BRCA1-201ENST00000352993 ANKRD30AQ9BXX3 1397 aa9.64□□□□□ -0.87
BRCA1-201ENST00000352993 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-201ENST00000352993 HSP90AB1P08238 724 aaKnown RBP9.64□□□□□ -0.87
BRCA1-201ENST00000352993 TSPY4P0CV99 314 aa9.64□□□□□ -0.87
BRCA1-201ENST00000352993 TSPY10P0CW01 314 aa9.64□□□□□ -0.87
BRCA1-201ENST00000352993 EIF3AQ14152 1382 aaKnown RBP9.64□□□□□ -0.87
BRCA1-201ENST00000352993 E9PSI1 815 aa9.63□□□□□ -0.87
BRCA1-201ENST00000352993 NCLP19338 710 aaKnown RBP9.63□□□□□ -0.87
BRCA1-201ENST00000352993 DISP3Q9P2K9 1392 aa9.63□□□□□ -0.87
BRCA1-201ENST00000352993 R3HCC1Q9Y3T6 440 aaKnown RBP9.62□□□□□ -0.87
BRCA1-201ENST00000352993 ANKRD50Q9ULJ7 1429 aa9.62□□□□□ -0.87
BRCA1-201ENST00000352993 GBP4Q96PP9 640 aa9.62□□□□□ -0.87
BRCA1-201ENST00000352993 RWDD1Q9H446 243 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-201ENST00000352993 ZBTB7CA1YPR0 619 aa9.61□□□□□ -0.87
BRCA1-201ENST00000352993 PDE3AQ14432 1141 aa9.61□□□□□ -0.87
BRCA1-201ENST00000352993 UHRF1BP1Q6BDS2 1440 aa9.61□□□□□ -0.87
BRCA1-201ENST00000352993 RRP7AQ9Y3A4 280 aaKnown RBP9.61□□□□□ -0.87
BRCA1-201ENST00000352993 GAS2L3Q86XJ1 694 aa9.6□□□□□ -0.87
BRCA1-201ENST00000352993 PCDHB15Q9Y5E8 787 aa9.6□□□□□ -0.87
BRCA1-201ENST00000352993 NKTRP30414 1462 aaKnown RBP9.6□□□□□ -0.87
BRCA1-201ENST00000352993 NASPP49321 788 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-201ENST00000352993 MROH2AA6NES4 1674 aa9.6□□□□□ -0.87
BRCA1-201ENST00000352993 DMRT2Q9Y5R5 561 aa9.6□□□□□ -0.87
BRCA1-201ENST00000352993 GOLGA6L22H0YM25 854 aa9.59□□□□□ -0.87
BRCA1-201ENST00000352993 TNNQ9UQP3 1299 aa9.59□□□□□ -0.87
BRCA1-201ENST00000352993 MYO5CQ9NQX4 1742 aa9.59□□□□□ -0.87
BRCA1-201ENST00000352993 FTSJ3Q8IY81 847 aaKnown RBP9.59□□□□□ -0.87
BRCA1-201ENST00000352993 DNMT1P26358 1616 aaKnown RBP9.59□□□□□ -0.87
BRCA1-201ENST00000352993 TNNT2P45379 298 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-201ENST00000352993 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-201ENST00000352993 TNPO1Q92973 898 aaKnown RBP9.59□□□□□ -0.87
BRCA1-201ENST00000352993 ISY1Q9ULR0 285 aaKnown RBP9.58□□□□□ -0.88
BRCA1-201ENST00000352993 ATP10BO94823 1461 aa9.58□□□□□ -0.88
BRCA1-201ENST00000352993 ERBINQ96RT1 1412 aa9.58□□□□□ -0.88
BRCA1-201ENST00000352993 ZSCAN30Q86W11 494 aa9.58□□□□□ -0.88
BRCA1-201ENST00000352993 PREX1Q8TCU6 1659 aa9.58□□□□□ -0.88
BRCA1-201ENST00000352993 ZNF521Q96K83 1311 aa9.58□□□□□ -0.88
BRCA1-201ENST00000352993 CCDC173Q0VFZ6 552 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms