RNA–Protein interactions for RNA: ENST00000351439.9

PDE1A-201, Transcript of phosphodiesterase 1A, humanhuman

TSL 1 (best) BASIC

Gene PDE1A, Length 2,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-201ENST00000351439 SKAP1Q86WV1 359 aa10.33□□□□□ -0.76
PDE1A-201ENST00000351439 LAMC1P11047 1609 aa10.32□□□□□ -0.76
PDE1A-201ENST00000351439 RBM10P98175 930 aaKnown RBP10.32□□□□□ -0.76
PDE1A-201ENST00000351439 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
PDE1A-201ENST00000351439 ARHGAP5Q13017 1502 aa10.32□□□□□ -0.76
PDE1A-201ENST00000351439 ERBINQ96RT1 1412 aa10.32□□□□□ -0.76
PDE1A-201ENST00000351439 PLEKHH2Q8IVE3 1493 aa10.31□□□□□ -0.76
PDE1A-201ENST00000351439 IQGAP3Q86VI3 1631 aa10.31□□□□□ -0.76
PDE1A-201ENST00000351439 BLMP54132 1417 aaPredicted RBP10.31□□□□□ -0.76
PDE1A-201ENST00000351439 RRAGDQ9NQL2 400 aaPredicted RBP10.3□□□□□ -0.76
PDE1A-201ENST00000351439 MAST1Q9Y2H9 1570 aa10.3□□□□□ -0.76
PDE1A-201ENST00000351439 CRBNQ96SW2 442 aa10.3□□□□□ -0.76
PDE1A-201ENST00000351439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.3□□□□□ -0.76
PDE1A-201ENST00000351439 CLCN1P35523 988 aa10.29□□□□□ -0.76
PDE1A-201ENST00000351439 TMF1P82094 1093 aa10.29□□□□□ -0.76
PDE1A-201ENST00000351439 PNNQ9H307 717 aaKnown RBP10.29□□□□□ -0.76
PDE1A-201ENST00000351439 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
PDE1A-201ENST00000351439 CALD1Q05682 793 aaKnown RBP10.29□□□□□ -0.76
PDE1A-201ENST00000351439 L1TD1Q5T7N2 865 aaKnown RBP10.29□□□□□ -0.76
PDE1A-201ENST00000351439 ADAMTS8Q9UP79 889 aa10.29□□□□□ -0.76
PDE1A-201ENST00000351439 C20orf194Q5TEA3 1177 aa10.28□□□□□ -0.76
PDE1A-201ENST00000351439 NAP1L5Q96NT1 182 aaPredicted RBP10.28□□□□□ -0.76
PDE1A-201ENST00000351439 ZMYM4Q5VZL5 1548 aa10.28□□□□□ -0.76
PDE1A-201ENST00000351439 PLXNC1O60486 1568 aa10.28□□□□□ -0.76
PDE1A-201ENST00000351439 PDE4CQ08493 712 aa10.28□□□□□ -0.76
PDE1A-201ENST00000351439 RNF17Q9BXT8 1623 aaKnown RBP10.27□□□□□ -0.77
PDE1A-201ENST00000351439 CLASP1Q7Z460 1538 aa10.27□□□□□ -0.77
PDE1A-201ENST00000351439 PDCL3Q9H2J4 239 aa10.26□□□□□ -0.77
PDE1A-201ENST00000351439 MAGI2Q86UL8 1455 aa10.26□□□□□ -0.77
PDE1A-201ENST00000351439 WDR7Q9Y4E6 1490 aa10.25□□□□□ -0.77
PDE1A-201ENST00000351439 DUOX2Q9NRD8 1548 aa10.25□□□□□ -0.77
PDE1A-201ENST00000351439 INSRP06213 1382 aa10.25□□□□□ -0.77
PDE1A-201ENST00000351439 ATP10AO60312 1499 aa10.25□□□□□ -0.77
PDE1A-201ENST00000351439 PPP2R1AP30153 589 aa10.24□□□□□ -0.77
PDE1A-201ENST00000351439 PLEKHH1Q9ULM0 1364 aa10.24□□□□□ -0.77
PDE1A-201ENST00000351439 IQGAP1P46940 1657 aa10.24□□□□□ -0.77
PDE1A-201ENST00000351439 A0A0U1RQG5 324 aaPredicted RBP10.24□□□□□ -0.77
PDE1A-201ENST00000351439 KNSTRNQ9Y448 316 aa10.24□□□□□ -0.77
PDE1A-201ENST00000351439 PRDM4Q9UKN5 801 aa10.23□□□□□ -0.77
PDE1A-201ENST00000351439 ERCC6L2Q5T890 1561 aa10.23□□□□□ -0.77
PDE1A-201ENST00000351439 MADDQ8WXG6 1647 aa10.23□□□□□ -0.77
PDE1A-201ENST00000351439 WDR43Q15061 677 aaKnown RBP eCLIP10.23□□□□□ -0.77
PDE1A-201ENST00000351439 DUSP27Q5VZP5 1158 aa10.22□□□□□ -0.77
PDE1A-201ENST00000351439 AMER1Q5JTC6 1135 aaPredicted RBP10.22□□□□□ -0.77
PDE1A-201ENST00000351439 FRAT2O75474 233 aaPredicted RBP10.21□□□□□ -0.77
PDE1A-201ENST00000351439 KDM2BQ8NHM5 1336 aa10.21□□□□□ -0.77
PDE1A-201ENST00000351439 SPHKAPQ2M3C7 1700 aa10.21□□□□□ -0.78
PDE1A-201ENST00000351439 TPM2P07951 284 aa10.21□□□□□ -0.78
PDE1A-201ENST00000351439 CEP152O94986 1710 aa10.2□□□□□ -0.78
PDE1A-201ENST00000351439 MYOM1P52179 1685 aa10.2□□□□□ -0.78
PDE1A-201ENST00000351439 ABCC2Q92887 1545 aa10.2□□□□□ -0.78
PDE1A-201ENST00000351439 SHROOM2Q13796 1616 aa10.2□□□□□ -0.78
PDE1A-201ENST00000351439 TRAPPC8Q9Y2L5 1435 aa10.2□□□□□ -0.78
PDE1A-201ENST00000351439 ZNF521Q96K83 1311 aa10.2□□□□□ -0.78
PDE1A-201ENST00000351439 GOLGA2Q08379 1002 aa10.19□□□□□ -0.78
PDE1A-201ENST00000351439 CCDC146Q8IYE0 955 aa10.19□□□□□ -0.78
PDE1A-201ENST00000351439 SYNMO15061 1565 aa10.19□□□□□ -0.78
PDE1A-201ENST00000351439 PLCH2O75038 1416 aa10.19□□□□□ -0.78
PDE1A-201ENST00000351439 PDIA4P13667 645 aaKnown RBP10.18□□□□□ -0.78
PDE1A-201ENST00000351439 SLC4A3P48751 1232 aa10.18□□□□□ -0.78
PDE1A-201ENST00000351439 CLTCL1P53675 1640 aa10.18□□□□□ -0.78
PDE1A-201ENST00000351439 ASXL1Q8IXJ9 1541 aa10.18□□□□□ -0.78
PDE1A-201ENST00000351439 EFCAB2Q5VUJ9 269 aa10.18□□□□□ -0.78
PDE1A-201ENST00000351439 ABCC1P33527 1531 aa10.17□□□□□ -0.78
PDE1A-201ENST00000351439 SCAF11Q99590 1463 aaKnown RBP10.17□□□□□ -0.78
PDE1A-201ENST00000351439 SLFN5Q08AF3 891 aa10.17□□□□□ -0.78
PDE1A-201ENST00000351439 CENPQQ7L2Z9 268 aaPredicted RBP10.17□□□□□ -0.78
PDE1A-201ENST00000351439 AFAP1Q8N556 730 aa10.17□□□□□ -0.78
PDE1A-201ENST00000351439 SPINK5Q9NQ38 1064 aaPredicted RBP10.17□□□□□ -0.78
PDE1A-201ENST00000351439 ZCCHC11Q5TAX3 1644 aaKnown RBP10.17□□□□□ -0.78
PDE1A-201ENST00000351439 TRPM2O94759 1503 aa10.17□□□□□ -0.78
PDE1A-201ENST00000351439 CDCA8Q53HL2 280 aa10.16□□□□□ -0.78
PDE1A-201ENST00000351439 PIK3C2GO75747 1445 aa10.16□□□□□ -0.78
PDE1A-201ENST00000351439 APAF1O14727 1248 aa10.16□□□□□ -0.78
PDE1A-201ENST00000351439 KDM5AP29375 1690 aaKnown RBP10.16□□□□□ -0.78
PDE1A-201ENST00000351439 SPAG9O60271 1321 aaKnown RBP10.15□□□□□ -0.78
PDE1A-201ENST00000351439 BCAR3O75815 825 aa10.15□□□□□ -0.79
PDE1A-201ENST00000351439 RGS3P49796 1198 aa10.15□□□□□ -0.79
PDE1A-201ENST00000351439 C8orf34Q49A92 452 aa10.15□□□□□ -0.79
PDE1A-201ENST00000351439 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.15□□□□□ -0.79
PDE1A-201ENST00000351439 SCAPERQ9BY12 1400 aa10.14□□□□□ -0.79
PDE1A-201ENST00000351439 FAM161AQ3B820 660 aa10.14□□□□□ -0.79
PDE1A-201ENST00000351439 TRMT2AQ8IZ69 625 aaKnown RBP10.14□□□□□ -0.79
PDE1A-201ENST00000351439 MAP7D2Q96T17 732 aa10.14□□□□□ -0.79
PDE1A-201ENST00000351439 DMRT2Q9Y5R5 561 aa10.13□□□□□ -0.79
PDE1A-201ENST00000351439 ZFYVE16Q7Z3T8 1539 aa10.13□□□□□ -0.79
PDE1A-201ENST00000351439 PTPRTO14522 1441 aa10.13□□□□□ -0.79
PDE1A-201ENST00000351439 CFAP70Q5T0N1 1121 aa10.13□□□□□ -0.79
PDE1A-201ENST00000351439 DEPDC5O75140 1603 aa10.13□□□□□ -0.79
PDE1A-201ENST00000351439 NKTRP30414 1462 aaKnown RBP10.13□□□□□ -0.79
PDE1A-201ENST00000351439 TET3O43151 1660 aa10.12□□□□□ -0.79
PDE1A-201ENST00000351439 UGGT1Q9NYU2 1555 aa10.12□□□□□ -0.79
PDE1A-201ENST00000351439 CARD14Q9BXL6 1004 aa10.12□□□□□ -0.79
PDE1A-201ENST00000351439 POGKQ9P215 609 aa10.12□□□□□ -0.79
PDE1A-201ENST00000351439 EIF3AQ14152 1382 aaKnown RBP10.11□□□□□ -0.79
PDE1A-201ENST00000351439 NPC1L1Q9UHC9 1359 aa10.11□□□□□ -0.79
PDE1A-201ENST00000351439 KIAA1210Q9ULL0 1709 aa10.11□□□□□ -0.79
PDE1A-201ENST00000351439 FSD2A1L4K1 749 aa10.11□□□□□ -0.79
PDE1A-201ENST00000351439 NCLP19338 710 aaKnown RBP10.11□□□□□ -0.79
PDE1A-201ENST00000351439 GOLGA6L3A6NEY3 463 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms