RNA–Protein interactions for RNA: ENST00000351137.8

CKLF-203, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-203ENST00000351137 LMTK2Q8IWU2 1503 aa24.69■■□□□ 1.54
CKLF-203ENST00000351137 ADGRB3O60242 1522 aa24.66■■□□□ 1.54
CKLF-203ENST00000351137 MYOM3Q5VTT5 1437 aa24.65■■□□□ 1.54
CKLF-203ENST00000351137 KANK1Q14678 1352 aa24.65■■□□□ 1.54
CKLF-203ENST00000351137 NOS1P29475 1434 aa24.64■■□□□ 1.54
CKLF-203ENST00000351137 CADPS2Q86UW7 1296 aa24.63■■□□□ 1.53
CKLF-203ENST00000351137 SLC52A1Q9NWF4 448 aa24.63■■□□□ 1.53
CKLF-203ENST00000351137 KIF15Q9NS87 1388 aa24.63■■□□□ 1.53
CKLF-203ENST00000351137 PLEKHG1Q9ULL1 1385 aa24.62■■□□□ 1.53
CKLF-203ENST00000351137 DIP2AQ14689 1571 aa24.61■■□□□ 1.53
CKLF-203ENST00000351137 FOXD1Q16676 465 aa24.59■■□□□ 1.53
CKLF-203ENST00000351137 C19orf44Q9H6X5 657 aa24.58■■□□□ 1.53
CKLF-203ENST00000351137 TBX22Q9Y458 520 aa24.58■■□□□ 1.53
CKLF-203ENST00000351137 ZFYVE9O95405 1425 aa24.58■■□□□ 1.53
CKLF-203ENST00000351137 HDGFP51858 240 aaKnown RBP24.57■■□□□ 1.52
CKLF-203ENST00000351137 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.57■■□□□ 1.52
CKLF-203ENST00000351137 AFF2P51816 1311 aa24.56■■□□□ 1.52
CKLF-203ENST00000351137 PIK3R4Q99570 1358 aa24.55■■□□□ 1.52
CKLF-203ENST00000351137 RBM6P78332 1123 aaKnown RBP24.55■■□□□ 1.52
CKLF-203ENST00000351137 RGS12O14924 1447 aa24.54■■□□□ 1.52
CKLF-203ENST00000351137 SETD5Q9C0A6 1442 aa24.54■■□□□ 1.52
CKLF-203ENST00000351137 BCANQ96GW7 911 aa24.54■■□□□ 1.52
CKLF-203ENST00000351137 ATF3P18847 181 aa24.53■■□□□ 1.52
CKLF-203ENST00000351137 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
CKLF-203ENST00000351137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.51■■□□□ 1.51
CKLF-203ENST00000351137 DCCP43146 1447 aa24.51■■□□□ 1.51
CKLF-203ENST00000351137 RPRD2Q5VT52 1461 aaKnown RBP24.51■■□□□ 1.51
CKLF-203ENST00000351137 BRINP3Q76B58 766 aa24.49■■□□□ 1.51
CKLF-203ENST00000351137 ABCC5O15440 1437 aa24.48■■□□□ 1.51
CKLF-203ENST00000351137 C14orf37Q86TY3 774 aa24.48■■□□□ 1.51
CKLF-203ENST00000351137 RIMS2Q9UQ26 1411 aa24.47■■□□□ 1.51
CKLF-203ENST00000351137 ATAD2Q6PL18 1390 aa24.47■■□□□ 1.51
CKLF-203ENST00000351137 RRP7BPQ9NSQ0 103 aa24.47■■□□□ 1.51
CKLF-203ENST00000351137 QTRT2Q9H974 415 aaKnown RBP24.46■■□□□ 1.51
CKLF-203ENST00000351137 NUTM2BA6NNL0 878 aaPredicted RBP24.45■■□□□ 1.5
CKLF-203ENST00000351137 NUTM2EB1AL46 878 aaPredicted RBP24.45■■□□□ 1.5
CKLF-203ENST00000351137 NUTM2AQ8IVF1 878 aaPredicted RBP24.45■■□□□ 1.5
CKLF-203ENST00000351137 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.45■■□□□ 1.5
CKLF-203ENST00000351137 ZRANB1Q9UGI0 708 aa24.45■■□□□ 1.5
CKLF-203ENST00000351137 NHSL1Q5SYE7 1610 aa24.44■■□□□ 1.5
CKLF-203ENST00000351137 PPP1R15AO75807 674 aaPredicted RBP24.44■■□□□ 1.5
CKLF-203ENST00000351137 LRRC59Q96AG4 307 aaKnown RBP24.44■■□□□ 1.5
CKLF-203ENST00000351137 NGLY1Q96IV0 654 aa24.44■■□□□ 1.5
CKLF-203ENST00000351137 MYO5BQ9ULV0 1848 aa24.44■■□□□ 1.5
CKLF-203ENST00000351137 ADAMTS13Q76LX8 1427 aa24.44■■□□□ 1.5
CKLF-203ENST00000351137 ASXL1Q8IXJ9 1541 aa24.43■■□□□ 1.5
CKLF-203ENST00000351137 TMEM131LA2VDJ0 1609 aa24.43■■□□□ 1.5
CKLF-203ENST00000351137 NUTM2DQ5VT03 806 aaPredicted RBP24.41■■□□□ 1.5
CKLF-203ENST00000351137 GCC2Q8IWJ2 1684 aa24.4■■□□□ 1.5
CKLF-203ENST00000351137 ANKRD30AQ9BXX3 1397 aa24.39■■□□□ 1.49
CKLF-203ENST00000351137 DAPK1P53355 1430 aa24.38■■□□□ 1.49
CKLF-203ENST00000351137 CCDC125Q86Z20 511 aa24.38■■□□□ 1.49
CKLF-203ENST00000351137 EP400Q96L91 3159 aa24.38■■□□□ 1.49
CKLF-203ENST00000351137 C8orf37Q96NL8 207 aa24.37■■□□□ 1.49
CKLF-203ENST00000351137 TRPM2O94759 1503 aa24.36■■□□□ 1.49
CKLF-203ENST00000351137 PNPLA6Q8IY17 1366 aa24.36■■□□□ 1.49
CKLF-203ENST00000351137 MST1RQ04912 1400 aa24.35■■□□□ 1.49
CKLF-203ENST00000351137 PTPN23Q9H3S7 1636 aa24.34■■□□□ 1.49
CKLF-203ENST00000351137 VPS8Q8N3P4 1428 aa24.34■■□□□ 1.49
CKLF-203ENST00000351137 SETBP1Q9Y6X0 1596 aa24.33■■□□□ 1.48
CKLF-203ENST00000351137 AMOTL2Q9Y2J4 779 aa24.32■■□□□ 1.48
CKLF-203ENST00000351137 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
CKLF-203ENST00000351137 PTPRUQ92729 1446 aa24.29■■□□□ 1.48
CKLF-203ENST00000351137 TRPC5Q9UL62 973 aaPredicted RBP24.29■■□□□ 1.48
CKLF-203ENST00000351137 XRN1Q8IZH2 1706 aaKnown RBP24.28■■□□□ 1.48
CKLF-203ENST00000351137 LAMC1P11047 1609 aa24.28■■□□□ 1.48
CKLF-203ENST00000351137 ADGRL2O95490 1459 aa24.26■■□□□ 1.47
CKLF-203ENST00000351137 FNBP4Q8N3X1 1017 aaPredicted RBP24.26■■□□□ 1.47
CKLF-203ENST00000351137 PTCH1Q13635 1447 aa24.26■■□□□ 1.47
CKLF-203ENST00000351137 UNC13BO14795 1591 aa24.25■■□□□ 1.47
CKLF-203ENST00000351137 ATRNO75882 1429 aa24.24■■□□□ 1.47
CKLF-203ENST00000351137 USP21Q9UK80 565 aa24.23■■□□□ 1.47
CKLF-203ENST00000351137 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
CKLF-203ENST00000351137 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
CKLF-203ENST00000351137 LRP5O75197 1615 aa24.18■■□□□ 1.46
CKLF-203ENST00000351137 ADAMTS2O95450 1211 aa24.18■■□□□ 1.46
CKLF-203ENST00000351137 SOS2Q07890 1332 aaPredicted RBP24.17■■□□□ 1.46
CKLF-203ENST00000351137 CHIC2Q9UKJ5 165 aa24.17■■□□□ 1.46
CKLF-203ENST00000351137 CHGAP10645 457 aaKnown RBP24.16■■□□□ 1.46
CKLF-203ENST00000351137 NRXN3Q9Y4C0 1643 aa24.16■■□□□ 1.46
CKLF-203ENST00000351137 COL22A1Q8NFW1 1626 aaPredicted RBP24.14■■□□□ 1.46
CKLF-203ENST00000351137 DDX17Q92841 729 aaKnown RBP24.13■■□□□ 1.45
CKLF-203ENST00000351137 C1orf167Q5SNV9 1468 aa24.13■■□□□ 1.45
CKLF-203ENST00000351137 BLMP54132 1417 aaPredicted RBP24.12■■□□□ 1.45
CKLF-203ENST00000351137 IQGAP3Q86VI3 1631 aa24.12■■□□□ 1.45
CKLF-203ENST00000351137 E9PCH4 1651 aa24.11■■□□□ 1.45
CKLF-203ENST00000351137 NALCNQ8IZF0 1738 aa24.1■■□□□ 1.45
CKLF-203ENST00000351137 BCL9LQ86UU0 1499 aa24.08■■□□□ 1.45
CKLF-203ENST00000351137 MYOM2P54296 1465 aa24.07■■□□□ 1.44
CKLF-203ENST00000351137 METP08581 1390 aa24.06■■□□□ 1.44
CKLF-203ENST00000351137 SPHKAPQ2M3C7 1700 aa24.05■■□□□ 1.44
CKLF-203ENST00000351137 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.05■■□□□ 1.44
CKLF-203ENST00000351137 MARF1Q9Y4F3 1742 aaKnown RBP24.05■■□□□ 1.44
CKLF-203ENST00000351137 GJD4Q96KN9 370 aaPredicted RBP24.05■■□□□ 1.44
CKLF-203ENST00000351137 PRAG1Q86YV5 1406 aa24.01■■□□□ 1.43
CKLF-203ENST00000351137 ORAI2Q96SN7 254 aa23.97■■□□□ 1.43
CKLF-203ENST00000351137 NPHP3Q7Z494 1330 aa23.95■■□□□ 1.42
CKLF-203ENST00000351137 SF3B2Q13435 895 aaKnown RBP23.95■■□□□ 1.42
CKLF-203ENST00000351137 APLP2Q06481 763 aa23.94■■□□□ 1.42
CKLF-203ENST00000351137 GLI3P10071 1580 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms