RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 UQCRHLA0A096LP55 91 aa18.81■□□□□ 0.6
COG3-201ENST00000349995 UQCRHP07919 91 aa18.81■□□□□ 0.6
COG3-201ENST00000349995 SYAP1Q96A49 352 aaPredicted RBP18.81■□□□□ 0.6
COG3-201ENST00000349995 HECW1Q76N89 1606 aa18.81■□□□□ 0.6
COG3-201ENST00000349995 NRDCO43847 1150 aa18.81■□□□□ 0.6
COG3-201ENST00000349995 CCDC184Q52MB2 194 aa18.81■□□□□ 0.6
COG3-201ENST00000349995 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
COG3-201ENST00000349995 NBPF1Q3BBV0 1214 aa18.8■□□□□ 0.6
COG3-201ENST00000349995 CCDC146Q8IYE0 955 aa18.8■□□□□ 0.6
COG3-201ENST00000349995 SUPT6HQ7KZ85 1726 aaKnown RBP18.8■□□□□ 0.6
COG3-201ENST00000349995 FOXD4L6Q3SYB3 417 aaPredicted RBP18.8■□□□□ 0.6
COG3-201ENST00000349995 FOXD4L3Q6VB84 417 aaPredicted RBP18.8■□□□□ 0.6
COG3-201ENST00000349995 SOX12O15370 315 aa18.8■□□□□ 0.6
COG3-201ENST00000349995 GOLGA6L6A8MZA4 724 aa18.79■□□□□ 0.6
COG3-201ENST00000349995 GOLGA2Q08379 1002 aa18.78■□□□□ 0.6
COG3-201ENST00000349995 PMFBP1Q8TBY8 1022 aa18.78■□□□□ 0.6
COG3-201ENST00000349995 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
COG3-201ENST00000349995 C9orf84Q5VXU9 1444 aa18.78■□□□□ 0.6
COG3-201ENST00000349995 PTPRKQ15262 1439 aa18.76■□□□□ 0.59
COG3-201ENST00000349995 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
COG3-201ENST00000349995 RNF214Q8ND24 703 aa18.76■□□□□ 0.59
COG3-201ENST00000349995 ZNF592Q92610 1267 aa18.75■□□□□ 0.59
COG3-201ENST00000349995 ARHGAP5Q13017 1502 aa18.75■□□□□ 0.59
COG3-201ENST00000349995 APBB1O00213 710 aa18.74■□□□□ 0.59
COG3-201ENST00000349995 MPNDQ8N594 471 aa18.74■□□□□ 0.59
COG3-201ENST00000349995 U2AF1L5P0DN76 240 aaPredicted RBP18.74■□□□□ 0.59
COG3-201ENST00000349995 U2AF1Q01081 240 aaKnown RBP eCLIP18.74■□□□□ 0.59
COG3-201ENST00000349995 CNTLNQ9NXG0 1405 aa18.74■□□□□ 0.59
COG3-201ENST00000349995 AEBP1Q8IUX7 1158 aa18.74■□□□□ 0.59
COG3-201ENST00000349995 NOL8Q76FK4 1167 aaKnown RBP18.74■□□□□ 0.59
COG3-201ENST00000349995 COG6Q9Y2V7 657 aa18.74■□□□□ 0.59
COG3-201ENST00000349995 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
COG3-201ENST00000349995 CBX1P83916 185 aa18.73■□□□□ 0.59
COG3-201ENST00000349995 ABCC5O15440 1437 aa18.72■□□□□ 0.59
COG3-201ENST00000349995 KIAA1107Q9UPP5 1409 aa18.72■□□□□ 0.59
COG3-201ENST00000349995 ARHGEF11O15085 1522 aa18.71■□□□□ 0.59
COG3-201ENST00000349995 ITPRIPQ8IWB1 547 aa18.71■□□□□ 0.59
COG3-201ENST00000349995 MCM4P33991 863 aa18.7■□□□□ 0.58
COG3-201ENST00000349995 CCDC173Q0VFZ6 552 aa18.7■□□□□ 0.58
COG3-201ENST00000349995 CGNQ9P2M7 1197 aaKnown RBP18.7■□□□□ 0.58
COG3-201ENST00000349995 EIF3AQ14152 1382 aaKnown RBP18.7■□□□□ 0.58
COG3-201ENST00000349995 PTPN23Q9H3S7 1636 aa18.7■□□□□ 0.58
COG3-201ENST00000349995 CCDC66A2RUB6 948 aa18.7■□□□□ 0.58
COG3-201ENST00000349995 CLCN1P35523 988 aa18.7■□□□□ 0.58
COG3-201ENST00000349995 PLCD3Q8N3E9 789 aa18.68■□□□□ 0.58
COG3-201ENST00000349995 CDCA7LQ96GN5 454 aa18.68■□□□□ 0.58
COG3-201ENST00000349995 BCL2L13Q9BXK5 485 aa18.68■□□□□ 0.58
COG3-201ENST00000349995 RRAGDQ9NQL2 400 aaPredicted RBP18.68■□□□□ 0.58
COG3-201ENST00000349995 TAOK2Q9UL54 1235 aa18.68■□□□□ 0.58
COG3-201ENST00000349995 MCTP1Q6DN14 999 aa18.68■□□□□ 0.58
COG3-201ENST00000349995 ZSCAN30Q86W11 494 aa18.67■□□□□ 0.58
COG3-201ENST00000349995 PANK2Q9BZ23 570 aa18.67■□□□□ 0.58
COG3-201ENST00000349995 ANKRD30BQ9BXX2 1392 aa18.67■□□□□ 0.58
COG3-201ENST00000349995 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
COG3-201ENST00000349995 CAVIN1Q6NZI2 390 aaKnown RBP18.66■□□□□ 0.58
COG3-201ENST00000349995 C22orf23Q9BZE7 217 aa18.66■□□□□ 0.58
COG3-201ENST00000349995 CFAP70Q5T0N1 1121 aa18.66■□□□□ 0.58
COG3-201ENST00000349995 TMEM132EQ6IEE7 984 aa18.65■□□□□ 0.58
COG3-201ENST00000349995 LMOD2Q6P5Q4 547 aa18.65■□□□□ 0.58
COG3-201ENST00000349995 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
COG3-201ENST00000349995 THOC2Q8NI27 1593 aaKnown RBP18.65■□□□□ 0.58
COG3-201ENST00000349995 CENPJQ9HC77 1338 aaPredicted RBP18.65■□□□□ 0.58
COG3-201ENST00000349995 ROCK1Q13464 1354 aa18.64■□□□□ 0.58
COG3-201ENST00000349995 HDGFL2Q7Z4V5 671 aaPredicted RBP18.64■□□□□ 0.57
COG3-201ENST00000349995 PHF14O94880 888 aa18.64■□□□□ 0.57
COG3-201ENST00000349995 CCDC39Q9UFE4 941 aa18.64■□□□□ 0.57
COG3-201ENST00000349995 E9PSI1 815 aa18.63■□□□□ 0.57
COG3-201ENST00000349995 CHMP4AQ9BY43 222 aa18.63■□□□□ 0.57
COG3-201ENST00000349995 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
COG3-201ENST00000349995 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
COG3-201ENST00000349995 XPCQ01831 940 aaPredicted RBP18.63■□□□□ 0.57
COG3-201ENST00000349995 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
COG3-201ENST00000349995 PDIA4P13667 645 aaKnown RBP18.62■□□□□ 0.57
COG3-201ENST00000349995 NCOA1Q15788 1441 aa18.62■□□□□ 0.57
COG3-201ENST00000349995 DIAPH3Q9NSV4 1193 aa18.62■□□□□ 0.57
COG3-201ENST00000349995 SCAPERQ9BY12 1400 aa18.62■□□□□ 0.57
COG3-201ENST00000349995 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
COG3-201ENST00000349995 HMGN5P82970 282 aaKnown RBP18.61■□□□□ 0.57
COG3-201ENST00000349995 XRCC6P12956 609 aaKnown RBP eCLIP18.61■□□□□ 0.57
COG3-201ENST00000349995 VGFO15240 615 aaPredicted RBP18.61■□□□□ 0.57
COG3-201ENST00000349995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.61■□□□□ 0.57
COG3-201ENST00000349995 APAF1O14727 1248 aa18.6■□□□□ 0.57
COG3-201ENST00000349995 TRERF1Q96PN7 1200 aa18.6■□□□□ 0.57
COG3-201ENST00000349995 GOLGA6L1Q8N7Z2 621 aa18.6■□□□□ 0.57
COG3-201ENST00000349995 MCCP23508 829 aa18.6■□□□□ 0.57
COG3-201ENST00000349995 HDGFP51858 240 aaKnown RBP18.6■□□□□ 0.57
COG3-201ENST00000349995 MINK1Q8N4C8 1332 aaPredicted RBP18.59■□□□□ 0.57
COG3-201ENST00000349995 ERICH4A6NGS2 130 aa18.59■□□□□ 0.57
COG3-201ENST00000349995 FAM69CQ0P6D2 419 aa18.59■□□□□ 0.57
COG3-201ENST00000349995 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.56
COG3-201ENST00000349995 ISY1Q9ULR0 285 aaKnown RBP18.58■□□□□ 0.56
COG3-201ENST00000349995 TEX35Q5T0J7 233 aa18.57■□□□□ 0.56
COG3-201ENST00000349995 KCNJ4P48050 445 aa18.57■□□□□ 0.56
COG3-201ENST00000349995 ST18O60284 1047 aa18.57■□□□□ 0.56
COG3-201ENST00000349995 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
COG3-201ENST00000349995 RAPGEF3O95398 923 aa18.56■□□□□ 0.56
COG3-201ENST00000349995 CHMP4BQ9H444 224 aaKnown RBP18.56■□□□□ 0.56
COG3-201ENST00000349995 IFT57Q9NWB7 429 aa18.56■□□□□ 0.56
COG3-201ENST00000349995 SMC4Q9NTJ3 1288 aa18.55■□□□□ 0.56
COG3-201ENST00000349995 NPHP1O15259 732 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms