RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 CLCN1P35523 988 aa20.18■□□□□ 0.82
LRP8-202ENST00000347547 TRMT2AQ8IZ69 625 aaKnown RBP20.17■□□□□ 0.82
LRP8-202ENST00000347547 MAPK8IP3Q9UPT6 1336 aa20.17■□□□□ 0.82
LRP8-202ENST00000347547 FSD2A1L4K1 749 aa20.17■□□□□ 0.82
LRP8-202ENST00000347547 DISP3Q9P2K9 1392 aa20.16■□□□□ 0.82
LRP8-202ENST00000347547 TESK2Q96S53 571 aa20.16■□□□□ 0.82
LRP8-202ENST00000347547 ZMYM3Q14202 1370 aa20.16■□□□□ 0.82
LRP8-202ENST00000347547 SLFN5Q08AF3 891 aa20.15■□□□□ 0.82
LRP8-202ENST00000347547 PANK3Q9H999 370 aa20.15■□□□□ 0.82
LRP8-202ENST00000347547 RRP9O43818 475 aaKnown RBP20.15■□□□□ 0.82
LRP8-202ENST00000347547 ERBINQ96RT1 1412 aa20.15■□□□□ 0.82
LRP8-202ENST00000347547 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
LRP8-202ENST00000347547 C9orf84Q5VXU9 1444 aa20.13■□□□□ 0.81
LRP8-202ENST00000347547 WDR7Q9Y4E6 1490 aa20.12■□□□□ 0.81
LRP8-202ENST00000347547 XRCC6P12956 609 aaKnown RBP eCLIP20.12■□□□□ 0.81
LRP8-202ENST00000347547 ARHGAP5Q13017 1502 aa20.12■□□□□ 0.81
LRP8-202ENST00000347547 NINLQ9Y2I6 1382 aa20.12■□□□□ 0.81
LRP8-202ENST00000347547 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
LRP8-202ENST00000347547 GOLGA6L3A6NEY3 463 aa20.11■□□□□ 0.81
LRP8-202ENST00000347547 ARAP3Q8WWN8 1544 aa20.11■□□□□ 0.81
LRP8-202ENST00000347547 SYCP2Q9BX26 1530 aa20.11■□□□□ 0.81
LRP8-202ENST00000347547 MAST1Q9Y2H9 1570 aa20.1■□□□□ 0.81
LRP8-202ENST00000347547 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
LRP8-202ENST00000347547 PLCH2O75038 1416 aa20.1■□□□□ 0.81
LRP8-202ENST00000347547 ABCA9Q8IUA7 1624 aa20.1■□□□□ 0.81
LRP8-202ENST00000347547 EIF2AK4Q9P2K8 1649 aaKnown RBP20.1■□□□□ 0.81
LRP8-202ENST00000347547 CCDC144AA2RUR9 1427 aa20.09■□□□□ 0.81
LRP8-202ENST00000347547 CCDC141Q6ZP82 1450 aa20.09■□□□□ 0.81
LRP8-202ENST00000347547 CGNL1Q0VF96 1302 aa20.08■□□□□ 0.81
LRP8-202ENST00000347547 SEC24BO95487 1268 aa20.08■□□□□ 0.8
LRP8-202ENST00000347547 IGHDP01880 384 aa20.08■□□□□ 0.8
LRP8-202ENST00000347547 TMF1P82094 1093 aa20.08■□□□□ 0.8
LRP8-202ENST00000347547 NAP1L5Q96NT1 182 aaPredicted RBP20.08■□□□□ 0.8
LRP8-202ENST00000347547 SLKQ9H2G2 1235 aaPredicted RBP20.08■□□□□ 0.8
LRP8-202ENST00000347547 PIK3C2GO75747 1445 aa20.07■□□□□ 0.8
LRP8-202ENST00000347547 HSP90AA1P07900 732 aaKnown RBP20.07■□□□□ 0.8
LRP8-202ENST00000347547 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
LRP8-202ENST00000347547 HSP90AA2PQ14568 343 aaPredicted RBP20.07■□□□□ 0.8
LRP8-202ENST00000347547 NBPF1Q3BBV0 1214 aa20.07■□□□□ 0.8
LRP8-202ENST00000347547 PDE3AQ14432 1141 aa20.07■□□□□ 0.8
LRP8-202ENST00000347547 ABCC1P33527 1531 aa20.06■□□□□ 0.8
LRP8-202ENST00000347547 TBC1D32Q96NH3 1257 aa20.06■□□□□ 0.8
LRP8-202ENST00000347547 ZMYND15Q9H091 742 aa20.06■□□□□ 0.8
LRP8-202ENST00000347547 A2MP01023 1474 aa20.06■□□□□ 0.8
LRP8-202ENST00000347547 FAM135AQ9P2D6 1515 aa20.05■□□□□ 0.8
LRP8-202ENST00000347547 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
LRP8-202ENST00000347547 ASXL2Q76L83 1435 aa20.03■□□□□ 0.8
LRP8-202ENST00000347547 MCM4P33991 863 aa20.03■□□□□ 0.8
LRP8-202ENST00000347547 VSIG10Q8N0Z9 540 aa20.03■□□□□ 0.8
LRP8-202ENST00000347547 MAGI2Q86UL8 1455 aa20.03■□□□□ 0.8
LRP8-202ENST00000347547 TSPY4P0CV99 314 aa20.02■□□□□ 0.8
LRP8-202ENST00000347547 TSPY10P0CW01 314 aa20.02■□□□□ 0.8
LRP8-202ENST00000347547 HNRNPMP52272 730 aaKnown RBP eCLIP20.02■□□□□ 0.8
LRP8-202ENST00000347547 NGEFQ8N5V2 710 aa20.02■□□□□ 0.8
LRP8-202ENST00000347547 TBC1D2Q9BYX2 928 aa20.02■□□□□ 0.8
LRP8-202ENST00000347547 UPF2Q9HAU5 1272 aaKnown RBP20.02■□□□□ 0.8
LRP8-202ENST00000347547 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
LRP8-202ENST00000347547 MRE11P49959 708 aa20.02■□□□□ 0.8
LRP8-202ENST00000347547 AAMPQ13685 434 aa20.02■□□□□ 0.8
LRP8-202ENST00000347547 CLUAP1Q96AJ1 413 aa20.01■□□□□ 0.79
LRP8-202ENST00000347547 RNF17Q9BXT8 1623 aaKnown RBP20.01■□□□□ 0.79
LRP8-202ENST00000347547 E9PSI1 815 aa20.01■□□□□ 0.79
LRP8-202ENST00000347547 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
LRP8-202ENST00000347547 AMER1Q5JTC6 1135 aaPredicted RBP20■□□□□ 0.79
LRP8-202ENST00000347547 BCAR3O75815 825 aa19.99■□□□□ 0.79
LRP8-202ENST00000347547 PANK2Q9BZ23 570 aa19.99■□□□□ 0.79
LRP8-202ENST00000347547 SYNMO15061 1565 aa19.98■□□□□ 0.79
LRP8-202ENST00000347547 PLA2R1Q13018 1463 aa19.98■□□□□ 0.79
LRP8-202ENST00000347547 RSPH4AQ5TD94 716 aa19.98■□□□□ 0.79
LRP8-202ENST00000347547 KNSTRNQ9Y448 316 aa19.98■□□□□ 0.79
LRP8-202ENST00000347547 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
LRP8-202ENST00000347547 SPINK5Q9NQ38 1064 aaPredicted RBP19.97■□□□□ 0.79
LRP8-202ENST00000347547 RIMBP3CA6NJZ7 1639 aa19.96■□□□□ 0.79
LRP8-202ENST00000347547 RIMBP3BA6NNM3 1639 aa19.96■□□□□ 0.79
LRP8-202ENST00000347547 RIMBP3Q9UFD9 1639 aa19.96■□□□□ 0.79
LRP8-202ENST00000347547 CHMP5Q9NZZ3 219 aa19.95■□□□□ 0.78
LRP8-202ENST00000347547 PMFBP1Q8TBY8 1022 aa19.95■□□□□ 0.78
LRP8-202ENST00000347547 TRAK2O60296 914 aa19.94■□□□□ 0.78
LRP8-202ENST00000347547 UNC13BO14795 1591 aa19.93■□□□□ 0.78
LRP8-202ENST00000347547 ESPNB1AK53 854 aa19.92■□□□□ 0.78
LRP8-202ENST00000347547 TRAPPC8Q9Y2L5 1435 aa19.92■□□□□ 0.78
LRP8-202ENST00000347547 ATP10AO60312 1499 aa19.92■□□□□ 0.78
LRP8-202ENST00000347547 EFCAB2Q5VUJ9 269 aa19.92■□□□□ 0.78
LRP8-202ENST00000347547 MYH16Q9H6N6 1097 aa19.91■□□□□ 0.78
LRP8-202ENST00000347547 GRPEL1Q9HAV7 217 aa19.91■□□□□ 0.78
LRP8-202ENST00000347547 CENPJQ9HC77 1338 aaPredicted RBP19.91■□□□□ 0.78
LRP8-202ENST00000347547 DDX11L8A8MPP1 907 aa19.91■□□□□ 0.78
LRP8-202ENST00000347547 TPM2P07951 284 aa19.91■□□□□ 0.78
LRP8-202ENST00000347547 APAF1O14727 1248 aa19.9■□□□□ 0.78
LRP8-202ENST00000347547 RTEL1-TNFRSF6BF6WH68 1400 aa19.9■□□□□ 0.78
LRP8-202ENST00000347547 FANCAO15360 1455 aa19.9■□□□□ 0.78
LRP8-202ENST00000347547 RGL3Q3MIN7 710 aa19.9■□□□□ 0.78
LRP8-202ENST00000347547 IQGAP1P46940 1657 aa19.89■□□□□ 0.77
LRP8-202ENST00000347547 ZFYVE16Q7Z3T8 1539 aa19.89■□□□□ 0.77
LRP8-202ENST00000347547 CDCA8Q53HL2 280 aa19.88■□□□□ 0.77
LRP8-202ENST00000347547 INO80Q9ULG1 1556 aaPredicted RBP19.88■□□□□ 0.77
LRP8-202ENST00000347547 GZF1Q9H116 711 aaPredicted RBP19.88■□□□□ 0.77
LRP8-202ENST00000347547 COG6Q9Y2V7 657 aa19.88■□□□□ 0.77
LRP8-202ENST00000347547 CCDC146Q8IYE0 955 aa19.87■□□□□ 0.77
LRP8-202ENST00000347547 PANK1Q8TE04 598 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms