RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CCDC7Q96M83 1385 aa30.03■■■□□ 2.4
TSPAN3-202ENST00000346495 NRXN1Q9ULB1 1477 aa30.03■■■□□ 2.4
TSPAN3-202ENST00000346495 FBXO31Q5XUX0 539 aaPredicted RBP30.02■■■□□ 2.4
TSPAN3-202ENST00000346495 C11orf95C9JLR9 678 aaPredicted RBP29.99■■■□□ 2.39
TSPAN3-202ENST00000346495 TMEM131LA2VDJ0 1609 aa29.99■■■□□ 2.39
TSPAN3-202ENST00000346495 ZMYM3Q14202 1370 aa29.98■■■□□ 2.39
TSPAN3-202ENST00000346495 ADGRF5Q8IZF2 1346 aa29.97■■■□□ 2.39
TSPAN3-202ENST00000346495 MYO5BQ9ULV0 1848 aa29.96■■■□□ 2.39
TSPAN3-202ENST00000346495 ST20-MTHFSA0A0A6YYL1 179 aa29.96■■■□□ 2.39
TSPAN3-202ENST00000346495 NEXMIFQ5QGS0 1516 aa29.95■■■□□ 2.39
TSPAN3-202ENST00000346495 IQGAP1P46940 1657 aa29.95■■■□□ 2.39
TSPAN3-202ENST00000346495 KIF7Q2M1P5 1343 aa29.95■■■□□ 2.39
TSPAN3-202ENST00000346495 PIK3C2GO75747 1445 aa29.9■■■□□ 2.38
TSPAN3-202ENST00000346495 SCAF11Q99590 1463 aaKnown RBP29.89■■■□□ 2.38
TSPAN3-202ENST00000346495 VGFO15240 615 aaPredicted RBP29.89■■■□□ 2.37
TSPAN3-202ENST00000346495 ZFYVE9O95405 1425 aa29.88■■■□□ 2.37
TSPAN3-202ENST00000346495 SETBP1Q9Y6X0 1596 aa29.87■■■□□ 2.37
TSPAN3-202ENST00000346495 CFAP70Q5T0N1 1121 aa29.87■■■□□ 2.37
TSPAN3-202ENST00000346495 FER1L4A9Z1Z3 1794 aa29.86■■■□□ 2.37
TSPAN3-202ENST00000346495 STAG3Q9UJ98 1225 aa29.84■■■□□ 2.37
TSPAN3-202ENST00000346495 C14orf93Q9H972 538 aaKnown RBP29.82■■■□□ 2.36
TSPAN3-202ENST00000346495 ANP32CO43423 234 aa29.82■■■□□ 2.36
TSPAN3-202ENST00000346495 EIF3AQ14152 1382 aaKnown RBP29.82■■■□□ 2.36
TSPAN3-202ENST00000346495 TNRQ92752 1358 aa29.82■■■□□ 2.36
TSPAN3-202ENST00000346495 A2ML1A8K2U0 1454 aa29.8■■■□□ 2.36
TSPAN3-202ENST00000346495 C3P01024 1663 aa29.78■■■□□ 2.36
TSPAN3-202ENST00000346495 TESK2Q96S53 571 aa29.78■■■□□ 2.36
TSPAN3-202ENST00000346495 KDM5AP29375 1690 aaKnown RBP29.78■■■□□ 2.36
TSPAN3-202ENST00000346495 ADGRB1O14514 1584 aa29.74■■■□□ 2.35
TSPAN3-202ENST00000346495 NUTM2DQ5VT03 806 aaPredicted RBP29.74■■■□□ 2.35
TSPAN3-202ENST00000346495 POLR3GLQ9BT43 218 aa29.74■■■□□ 2.35
TSPAN3-202ENST00000346495 TMF1P82094 1093 aa29.73■■■□□ 2.35
TSPAN3-202ENST00000346495 MYO3AQ8NEV4 1616 aa29.71■■■□□ 2.35
TSPAN3-202ENST00000346495 RIMS2Q9UQ26 1411 aa29.7■■■□□ 2.35
TSPAN3-202ENST00000346495 NLRP1Q9C000 1473 aa29.7■■■□□ 2.34
TSPAN3-202ENST00000346495 DISP3Q9P2K9 1392 aa29.68■■■□□ 2.34
TSPAN3-202ENST00000346495 SLC24A1O60721 1099 aa29.68■■■□□ 2.34
TSPAN3-202ENST00000346495 UBR1Q8IWV7 1749 aa29.68■■■□□ 2.34
TSPAN3-202ENST00000346495 CCER2I3L3R5 266 aa29.65■■■□□ 2.34
TSPAN3-202ENST00000346495 CEBPAP49715 358 aaPredicted RBP29.65■■■□□ 2.34
TSPAN3-202ENST00000346495 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.64■■■□□ 2.34
TSPAN3-202ENST00000346495 CDCA8Q53HL2 280 aa29.63■■■□□ 2.33
TSPAN3-202ENST00000346495 HDGFP51858 240 aaKnown RBP29.62■■■□□ 2.33
TSPAN3-202ENST00000346495 TMEM132EQ6IEE7 984 aa29.62■■■□□ 2.33
TSPAN3-202ENST00000346495 RIMS1Q86UR5 1692 aaKnown RBP29.61■■■□□ 2.33
TSPAN3-202ENST00000346495 ALKQ9UM73 1620 aa29.61■■■□□ 2.33
TSPAN3-202ENST00000346495 ADAMTSL3P82987 1691 aa29.61■■■□□ 2.33
TSPAN3-202ENST00000346495 SBNO2Q9Y2G9 1366 aa29.6■■■□□ 2.33
TSPAN3-202ENST00000346495 ASXL1Q8IXJ9 1541 aa29.59■■■□□ 2.33
TSPAN3-202ENST00000346495 TRAK1Q9UPV9 953 aa29.59■■■□□ 2.33
TSPAN3-202ENST00000346495 CENPJQ9HC77 1338 aaPredicted RBP29.58■■■□□ 2.33
TSPAN3-202ENST00000346495 ARHGEF28Q8N1W1 1705 aaKnown RBP29.58■■■□□ 2.33
TSPAN3-202ENST00000346495 QRICH2Q9H0J4 1663 aa29.58■■■□□ 2.33
TSPAN3-202ENST00000346495 TMEM2Q9UHN6 1383 aa29.56■■■□□ 2.32
TSPAN3-202ENST00000346495 PRKRIP1Q9H875 184 aaPredicted RBP29.53■■■□□ 2.32
TSPAN3-202ENST00000346495 SETD1AO15047 1707 aaKnown RBP29.52■■■□□ 2.32
TSPAN3-202ENST00000346495 PLPPR3Q6T4P5 718 aa29.51■■■□□ 2.31
TSPAN3-202ENST00000346495 YTHDC1Q96MU7 727 aaKnown RBP29.51■■■□□ 2.31
TSPAN3-202ENST00000346495 NRXN3Q9Y4C0 1643 aa29.51■■■□□ 2.31
TSPAN3-202ENST00000346495 YTHDC2Q9H6S0 1430 aaKnown RBP29.5■■■□□ 2.31
TSPAN3-202ENST00000346495 SENP3Q9H4L4 574 aaPredicted RBP29.48■■■□□ 2.31
TSPAN3-202ENST00000346495 PTPRMP28827 1452 aa29.48■■■□□ 2.31
TSPAN3-202ENST00000346495 SLIT1O75093 1534 aa29.46■■■□□ 2.31
TSPAN3-202ENST00000346495 MYOM1P52179 1685 aa29.44■■■□□ 2.3
TSPAN3-202ENST00000346495 ARHGAP23Q9P227 1491 aa29.44■■■□□ 2.3
TSPAN3-202ENST00000346495 CENPBP07199 599 aaPredicted RBP29.44■■■□□ 2.3
TSPAN3-202ENST00000346495 STK26Q9P289 416 aa29.43■■■□□ 2.3
TSPAN3-202ENST00000346495 THEMISQ8N1K5 641 aaPredicted RBP29.42■■■□□ 2.3
TSPAN3-202ENST00000346495 DLC1Q96QB1 1528 aa29.41■■■□□ 2.3
TSPAN3-202ENST00000346495 CEP170BQ9Y4F5 1589 aaPredicted RBP29.41■■■□□ 2.3
TSPAN3-202ENST00000346495 LRPPRCP42704 1394 aaKnown RBP29.41■■■□□ 2.3
TSPAN3-202ENST00000346495 PLEKHG1Q9ULL1 1385 aa29.41■■■□□ 2.3
TSPAN3-202ENST00000346495 PANK3Q9H999 370 aa29.41■■■□□ 2.3
TSPAN3-202ENST00000346495 EID1Q9Y6B2 187 aa29.41■■■□□ 2.3
TSPAN3-202ENST00000346495 KTN1Q86UP2 1357 aaKnown RBP29.4■■■□□ 2.3
TSPAN3-202ENST00000346495 PER1O15534 1290 aaPredicted RBP29.38■■■□□ 2.29
TSPAN3-202ENST00000346495 TXNDC2Q86VQ3 553 aa29.38■■■□□ 2.29
TSPAN3-202ENST00000346495 ZNF142P52746 1687 aaPredicted RBP29.37■■■□□ 2.29
TSPAN3-202ENST00000346495 LTKP29376 864 aa29.36■■■□□ 2.29
TSPAN3-202ENST00000346495 BCANQ96GW7 911 aa29.36■■■□□ 2.29
TSPAN3-202ENST00000346495 PUS7Q96PZ0 661 aaKnown RBP29.36■■■□□ 2.29
TSPAN3-202ENST00000346495 ABCC11Q96J66 1382 aa29.36■■■□□ 2.29
TSPAN3-202ENST00000346495 EVC2Q86UK5 1308 aa29.35■■■□□ 2.29
TSPAN3-202ENST00000346495 KNDC1Q76NI1 1749 aa29.35■■■□□ 2.29
TSPAN3-202ENST00000346495 POGKQ9P215 609 aa29.34■■■□□ 2.29
TSPAN3-202ENST00000346495 SETD1BQ9UPS6 1966 aaKnown RBP29.34■■■□□ 2.29
TSPAN3-202ENST00000346495 PRAM1Q96QH2 718 aa29.34■■■□□ 2.29
TSPAN3-202ENST00000346495 TULP4Q9NRJ4 1543 aa29.34■■■□□ 2.29
TSPAN3-202ENST00000346495 ADAMTS13Q76LX8 1427 aa29.33■■■□□ 2.29
TSPAN3-202ENST00000346495 RALBP1Q15311 655 aa29.33■■■□□ 2.29
TSPAN3-202ENST00000346495 METP08581 1390 aa29.33■■■□□ 2.29
TSPAN3-202ENST00000346495 CNGB1Q14028 1251 aaPredicted RBP29.28■■■□□ 2.28
TSPAN3-202ENST00000346495 SAFB2Q14151 953 aaKnown RBP eCLIP29.28■■■□□ 2.28
TSPAN3-202ENST00000346495 TECPR2O15040 1411 aa29.28■■■□□ 2.28
TSPAN3-202ENST00000346495 MED14O60244 1454 aa29.28■■■□□ 2.28
TSPAN3-202ENST00000346495 SIRT1Q96EB6 747 aa29.27■■■□□ 2.28
TSPAN3-202ENST00000346495 KNSTRNQ9Y448 316 aa29.27■■■□□ 2.28
TSPAN3-202ENST00000346495 PARD3Q8TEW0 1356 aa29.26■■■□□ 2.27
TSPAN3-202ENST00000346495 CPS1P31327 1500 aa29.26■■■□□ 2.27
TSPAN3-202ENST00000346495 DIP2AQ14689 1571 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms