RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PANK1Q8TE04 598 aa22.07■■□□□ 1.12
SMC4-201ENST00000344722 A0A0G2JS52 829 aa22.06■■□□□ 1.12
SMC4-201ENST00000344722 MBD3O95983 291 aa22.06■■□□□ 1.12
SMC4-201ENST00000344722 CDCA7LQ96GN5 454 aa22.06■■□□□ 1.12
SMC4-201ENST00000344722 PODXL2Q9NZ53 605 aa22.06■■□□□ 1.12
SMC4-201ENST00000344722 SOX12O15370 315 aa22.05■■□□□ 1.12
SMC4-201ENST00000344722 RUNDC1Q96C34 613 aa22.05■■□□□ 1.12
SMC4-201ENST00000344722 IFT57Q9NWB7 429 aa22.05■■□□□ 1.12
SMC4-201ENST00000344722 CAVIN1Q6NZI2 390 aaKnown RBP22.04■■□□□ 1.12
SMC4-201ENST00000344722 CCAR2Q8N163 923 aaKnown RBP22.04■■□□□ 1.12
SMC4-201ENST00000344722 NOM1Q5C9Z4 860 aaKnown RBP22.04■■□□□ 1.12
SMC4-201ENST00000344722 TULP1O00294 542 aaPredicted RBP22.04■■□□□ 1.12
SMC4-201ENST00000344722 CDC45O75419 566 aa22.04■■□□□ 1.12
SMC4-201ENST00000344722 MYOM3Q5VTT5 1437 aa22.03■■□□□ 1.12
SMC4-201ENST00000344722 LETM1O95202 739 aaPredicted RBP22.03■■□□□ 1.12
SMC4-201ENST00000344722 HNRNPMP52272 730 aaKnown RBP eCLIP22.03■■□□□ 1.122e-9■□□□□ 8.7
SMC4-201ENST00000344722 FAM184AQ8NB25 1140 aa22.02■■□□□ 1.12
SMC4-201ENST00000344722 HDGFP51858 240 aaKnown RBP22.02■■□□□ 1.12
SMC4-201ENST00000344722 LNPKQ9C0E8 428 aa22.02■■□□□ 1.12
SMC4-201ENST00000344722 PDE3AQ14432 1141 aa22.02■■□□□ 1.12
SMC4-201ENST00000344722 API5Q9BZZ5 524 aaKnown RBP22.02■■□□□ 1.12
SMC4-201ENST00000344722 ROCK1Q13464 1354 aa22.02■■□□□ 1.11
SMC4-201ENST00000344722 MCM4P33991 863 aa22■■□□□ 1.11
SMC4-201ENST00000344722 HOMER1Q86YM7 354 aa22■■□□□ 1.11
SMC4-201ENST00000344722 TSPY26PQ9H489 355 aa22■■□□□ 1.11
SMC4-201ENST00000344722 PNISRQ8TF01 805 aaKnown RBP22■■□□□ 1.11
SMC4-201ENST00000344722 PDZRN3Q9UPQ7 1066 aa22■■□□□ 1.11
SMC4-201ENST00000344722 ADAMTS8Q9UP79 889 aa22■■□□□ 1.11
SMC4-201ENST00000344722 RNF214Q8ND24 703 aa21.99■■□□□ 1.11
SMC4-201ENST00000344722 NINLQ9Y2I6 1382 aa21.99■■□□□ 1.11
SMC4-201ENST00000344722 SASS6Q6UVJ0 657 aa21.99■■□□□ 1.11
SMC4-201ENST00000344722 RUFY2Q8WXA3 655 aa21.99■■□□□ 1.11
SMC4-201ENST00000344722 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
SMC4-201ENST00000344722 EFCAB2Q5VUJ9 269 aa21.98■■□□□ 1.11
SMC4-201ENST00000344722 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
SMC4-201ENST00000344722 UQCRHLA0A096LP55 91 aa21.98■■□□□ 1.11
SMC4-201ENST00000344722 UQCRHP07919 91 aa21.98■■□□□ 1.11
SMC4-201ENST00000344722 WASHC2CQ9Y4E1 1318 aa21.97■■□□□ 1.11
SMC4-201ENST00000344722 TDRD9Q8NDG6 1382 aaKnown RBP21.97■■□□□ 1.11
SMC4-201ENST00000344722 CCDC70Q6NSX1 233 aa21.97■■□□□ 1.11
SMC4-201ENST00000344722 SMC3Q9UQE7 1217 aa21.97■■□□□ 1.11
SMC4-201ENST00000344722 ELL2O00472 640 aaPredicted RBP21.96■■□□□ 1.11
SMC4-201ENST00000344722 ZKSCAN1P17029 563 aaPredicted RBP21.96■■□□□ 1.11
SMC4-201ENST00000344722 BICD2Q8TD16 824 aa21.96■■□□□ 1.11
SMC4-201ENST00000344722 CWC15Q9P013 229 aaKnown RBP21.96■■□□□ 1.11
SMC4-201ENST00000344722 TPM1P09493 284 aa21.96■■□□□ 1.11
SMC4-201ENST00000344722 CIZ1Q9ULV3 898 aaPredicted RBP21.96■■□□□ 1.11
SMC4-201ENST00000344722 MNS1Q8NEH6 495 aa21.95■■□□□ 1.1
SMC4-201ENST00000344722 RABEP1Q15276 862 aa21.95■■□□□ 1.1
SMC4-201ENST00000344722 ANO2Q9NQ90 1003 aa21.95■■□□□ 1.1
SMC4-201ENST00000344722 PRPF40AO75400 957 aaKnown RBP21.94■■□□□ 1.1
SMC4-201ENST00000344722 LMOD2Q6P5Q4 547 aa21.93■■□□□ 1.1
SMC4-201ENST00000344722 GGT6Q6P531 493 aa21.93■■□□□ 1.1
SMC4-201ENST00000344722 ZSCAN30Q86W11 494 aa21.93■■□□□ 1.1
SMC4-201ENST00000344722 TSR1Q2NL82 804 aaKnown RBP21.92■■□□□ 1.1
SMC4-201ENST00000344722 ACBD3Q9H3P7 528 aa21.92■■□□□ 1.1
SMC4-201ENST00000344722 CWC22Q9HCG8 908 aaKnown RBP21.92■■□□□ 1.1
SMC4-201ENST00000344722 CHMP3Q9Y3E7 222 aa21.92■■□□□ 1.1
SMC4-201ENST00000344722 TPD52L1Q16890 204 aaPredicted RBP21.91■■□□□ 1.1
SMC4-201ENST00000344722 CCDC184Q52MB2 194 aa21.91■■□□□ 1.1
SMC4-201ENST00000344722 TRAK1Q9UPV9 953 aa21.91■■□□□ 1.1
SMC4-201ENST00000344722 MCM2P49736 904 aa21.9■■□□□ 1.1
SMC4-201ENST00000344722 RIPK4P57078 832 aa21.9■■□□□ 1.1
SMC4-201ENST00000344722 VPS37CA5D8V6 355 aaPredicted RBP21.9■■□□□ 1.1
SMC4-201ENST00000344722 CREBRFQ8IUR6 639 aa21.9■■□□□ 1.1
SMC4-201ENST00000344722 GORABQ5T7V8 394 aa21.89■■□□□ 1.1
SMC4-201ENST00000344722 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
SMC4-201ENST00000344722 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
SMC4-201ENST00000344722 PDCL3Q9H2J4 239 aa21.88■■□□□ 1.09
SMC4-201ENST00000344722 K7ELQ4 463 aaPredicted RBP21.88■■□□□ 1.09
SMC4-201ENST00000344722 TAF3Q5VWG9 929 aa21.88■■□□□ 1.09
SMC4-201ENST00000344722 KIF3BO15066 747 aa21.87■■□□□ 1.09
SMC4-201ENST00000344722 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.87■■□□□ 1.09
SMC4-201ENST00000344722 DIAPH1O60610 1272 aaKnown RBP21.86■■□□□ 1.09
SMC4-201ENST00000344722 HSP90B2PQ58FF3 399 aa21.86■■□□□ 1.09
SMC4-201ENST00000344722 PPP2R1AP30153 589 aa21.85■■□□□ 1.09
SMC4-201ENST00000344722 FYCO1Q9BQS8 1478 aa21.85■■□□□ 1.09
SMC4-201ENST00000344722 RNF20Q5VTR2 975 aa21.85■■□□□ 1.09
SMC4-201ENST00000344722 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
SMC4-201ENST00000344722 RASSF8Q8NHQ8 419 aa21.84■■□□□ 1.09
SMC4-201ENST00000344722 CASKIN1Q8WXD9 1431 aa21.84■■□□□ 1.09
SMC4-201ENST00000344722 CCDC73Q6ZRK6 1079 aa21.84■■□□□ 1.09
SMC4-201ENST00000344722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.84■■□□□ 1.096e-65■■■■■ 143.5
SMC4-201ENST00000344722 GCC1Q96CN9 775 aa21.84■■□□□ 1.09
SMC4-201ENST00000344722 STAC3Q96MF2 364 aa21.84■■□□□ 1.09
SMC4-201ENST00000344722 NAT10Q9H0A0 1025 aaKnown RBP21.84■■□□□ 1.09
SMC4-201ENST00000344722 TRIM5Q9C035 493 aa21.83■■□□□ 1.09
SMC4-201ENST00000344722 GNAI1P63096 354 aa21.82■■□□□ 1.08
SMC4-201ENST00000344722 NCOA2Q15596 1464 aa21.82■■□□□ 1.08
SMC4-201ENST00000344722 BCAR3O75815 825 aa21.82■■□□□ 1.08
SMC4-201ENST00000344722 IGF1RP08069 1367 aa21.82■■□□□ 1.08
SMC4-201ENST00000344722 HOOK1Q9UJC3 728 aaKnown RBP21.81■■□□□ 1.08
SMC4-201ENST00000344722 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
SMC4-201ENST00000344722 CADPSQ9ULU8 1353 aa21.8■■□□□ 1.08
SMC4-201ENST00000344722 CCP110O43303 1012 aa21.79■■□□□ 1.08
SMC4-201ENST00000344722 AK7Q96M32 723 aa21.79■■□□□ 1.08
SMC4-201ENST00000344722 PES1O00541 588 aaKnown RBP21.79■■□□□ 1.08
SMC4-201ENST00000344722 HFM1A2PYH4 1435 aa21.79■■□□□ 1.08
SMC4-201ENST00000344722 IPO7O95373 1038 aaKnown RBP21.79■■□□□ 1.08
SMC4-201ENST00000344722 PDS5BQ9NTI5 1447 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms