RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 MYO5BQ9ULV0 1848 aa24.05■■□□□ 1.44
ATG4B-201ENST00000344376 PLEKHG1Q9ULL1 1385 aa24.05■■□□□ 1.44
ATG4B-201ENST00000344376 SLC4A1APQ9BWU0 796 aaKnown RBP24.04■■□□□ 1.44
ATG4B-201ENST00000344376 SLC26A8Q96RN1 970 aa24.03■■□□□ 1.44
ATG4B-201ENST00000344376 TRPM2O94759 1503 aa24.03■■□□□ 1.44
ATG4B-201ENST00000344376 LRRC7Q96NW7 1537 aa24.03■■□□□ 1.44
ATG4B-201ENST00000344376 STRCP1A6NGW2 1772 aa24.02■■□□□ 1.44
ATG4B-201ENST00000344376 TOM1O60784 492 aa24.02■■□□□ 1.44
ATG4B-201ENST00000344376 ACIN1Q9UKV3 1341 aaKnown RBP23.99■■□□□ 1.43
ATG4B-201ENST00000344376 KCNA6P17658 529 aa23.99■■□□□ 1.43
ATG4B-201ENST00000344376 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
ATG4B-201ENST00000344376 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
ATG4B-201ENST00000344376 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
ATG4B-201ENST00000344376 SCAF1Q9H7N4 1312 aaKnown RBP23.97■■□□□ 1.43
ATG4B-201ENST00000344376 CLTCL1P53675 1640 aa23.96■■□□□ 1.43
ATG4B-201ENST00000344376 SETD5Q9C0A6 1442 aa23.95■■□□□ 1.43
ATG4B-201ENST00000344376 PIP4K2BP78356 416 aa23.94■■□□□ 1.42
ATG4B-201ENST00000344376 TBX22Q9Y458 520 aa23.93■■□□□ 1.42
ATG4B-201ENST00000344376 NKTRP30414 1462 aaKnown RBP23.92■■□□□ 1.42
ATG4B-201ENST00000344376 DIP2AQ14689 1571 aa23.92■■□□□ 1.42
ATG4B-201ENST00000344376 NWD1Q149M9 1564 aa23.92■■□□□ 1.42
ATG4B-201ENST00000344376 PROSER2Q86WR7 435 aaPredicted RBP23.91■■□□□ 1.42
ATG4B-201ENST00000344376 ADAMTS13Q76LX8 1427 aa23.9■■□□□ 1.42
ATG4B-201ENST00000344376 TMEM94Q12767 1356 aa23.89■■□□□ 1.42
ATG4B-201ENST00000344376 KIF1BO60333 1816 aa23.89■■□□□ 1.41
ATG4B-201ENST00000344376 MPHOSPH9Q99550 1183 aa23.89■■□□□ 1.41
ATG4B-201ENST00000344376 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
ATG4B-201ENST00000344376 FOXD1Q16676 465 aa23.86■■□□□ 1.41
ATG4B-201ENST00000344376 RAB3GAP2Q9H2M9 1393 aa23.85■■□□□ 1.41
ATG4B-201ENST00000344376 CCDC144AA2RUR9 1427 aa23.84■■□□□ 1.41
ATG4B-201ENST00000344376 NEXMIFQ5QGS0 1516 aa23.84■■□□□ 1.41
ATG4B-201ENST00000344376 SETBP1Q9Y6X0 1596 aa23.84■■□□□ 1.41
ATG4B-201ENST00000344376 ALKQ9UM73 1620 aa23.84■■□□□ 1.41
ATG4B-201ENST00000344376 CHD2O14647 1828 aaKnown RBP23.83■■□□□ 1.4
ATG4B-201ENST00000344376 XIRP1Q702N8 1843 aaKnown RBP23.82■■□□□ 1.4
ATG4B-201ENST00000344376 RPGRIP1LQ68CZ1 1315 aa23.82■■□□□ 1.4
ATG4B-201ENST00000344376 VGFO15240 615 aaPredicted RBP23.8■■□□□ 1.4
ATG4B-201ENST00000344376 RBM33Q96EV2 1170 aaKnown RBP23.8■■□□□ 1.4
ATG4B-201ENST00000344376 MSH6P52701 1360 aa23.8■■□□□ 1.4
ATG4B-201ENST00000344376 HSPA1LP34931 641 aa23.79■■□□□ 1.4
ATG4B-201ENST00000344376 NRXN3Q9Y4C0 1643 aa23.79■■□□□ 1.4
ATG4B-201ENST00000344376 AMOTL2Q9Y2J4 779 aa23.77■■□□□ 1.4
ATG4B-201ENST00000344376 NCOA3Q9Y6Q9 1424 aa23.76■■□□□ 1.39
ATG4B-201ENST00000344376 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
ATG4B-201ENST00000344376 PTPRUQ92729 1446 aa23.74■■□□□ 1.39
ATG4B-201ENST00000344376 METP08581 1390 aa23.72■■□□□ 1.39
ATG4B-201ENST00000344376 HRCP23327 699 aa23.72■■□□□ 1.39
ATG4B-201ENST00000344376 SPATA31E1Q6ZUB1 1445 aa23.71■■□□□ 1.39
ATG4B-201ENST00000344376 RGL3Q3MIN7 710 aa23.7■■□□□ 1.38
ATG4B-201ENST00000344376 FAM135BQ49AJ0 1406 aa23.7■■□□□ 1.38
ATG4B-201ENST00000344376 DISP3Q9P2K9 1392 aa23.7■■□□□ 1.38
ATG4B-201ENST00000344376 PPLO60437 1756 aa23.7■■□□□ 1.38
ATG4B-201ENST00000344376 XRN1Q8IZH2 1706 aaKnown RBP23.69■■□□□ 1.38
ATG4B-201ENST00000344376 ANKRD30BQ9BXX2 1392 aa23.68■■□□□ 1.38
ATG4B-201ENST00000344376 C19orf44Q9H6X5 657 aa23.67■■□□□ 1.38
ATG4B-201ENST00000344376 CADPS2Q86UW7 1296 aa23.65■■□□□ 1.38
ATG4B-201ENST00000344376 SLAIN2Q9P270 581 aa23.65■■□□□ 1.38
ATG4B-201ENST00000344376 ATF3P18847 181 aa23.65■■□□□ 1.38
ATG4B-201ENST00000344376 ROBO1Q9Y6N7 1651 aa23.63■■□□□ 1.37
ATG4B-201ENST00000344376 ADGRF5Q8IZF2 1346 aa23.61■■□□□ 1.37
ATG4B-201ENST00000344376 DCCP43146 1447 aa23.61■■□□□ 1.37
ATG4B-201ENST00000344376 SETD1AO15047 1707 aaKnown RBP23.6■■□□□ 1.37
ATG4B-201ENST00000344376 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.6■■□□□ 1.37
ATG4B-201ENST00000344376 PTCH1Q13635 1447 aa23.6■■□□□ 1.37
ATG4B-201ENST00000344376 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
ATG4B-201ENST00000344376 PRAG1Q86YV5 1406 aa23.56■■□□□ 1.36
ATG4B-201ENST00000344376 ADGRL3Q9HAR2 1447 aa23.56■■□□□ 1.36
ATG4B-201ENST00000344376 PIK3C2GO75747 1445 aa23.55■■□□□ 1.36
ATG4B-201ENST00000344376 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
ATG4B-201ENST00000344376 ROBO2Q9HCK4 1378 aa23.54■■□□□ 1.36
ATG4B-201ENST00000344376 MYOM2P54296 1465 aa23.53■■□□□ 1.36
ATG4B-201ENST00000344376 NRXN1Q9ULB1 1477 aa23.49■■□□□ 1.35
ATG4B-201ENST00000344376 LRPPRCP42704 1394 aaKnown RBP23.49■■□□□ 1.35
ATG4B-201ENST00000344376 PHLPP1O60346 1717 aa23.49■■□□□ 1.35
ATG4B-201ENST00000344376 NALCNQ8IZF0 1738 aa23.49■■□□□ 1.35
ATG4B-201ENST00000344376 MST1RQ04912 1400 aa23.48■■□□□ 1.35
ATG4B-201ENST00000344376 STK26Q9P289 416 aa23.48■■□□□ 1.35
ATG4B-201ENST00000344376 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
ATG4B-201ENST00000344376 TECPR2O15040 1411 aa23.46■■□□□ 1.35
ATG4B-201ENST00000344376 BRINP3Q76B58 766 aa23.46■■□□□ 1.35
ATG4B-201ENST00000344376 C14orf93Q9H972 538 aaKnown RBP23.46■■□□□ 1.35
ATG4B-201ENST00000344376 LAMC1P11047 1609 aa23.46■■□□□ 1.35
ATG4B-201ENST00000344376 TMEM132EQ6IEE7 984 aa23.45■■□□□ 1.34
ATG4B-201ENST00000344376 ASXL1Q8IXJ9 1541 aa23.45■■□□□ 1.34
ATG4B-201ENST00000344376 ABCC11Q96J66 1382 aa23.45■■□□□ 1.34
ATG4B-201ENST00000344376 AHDC1Q5TGY3 1603 aaPredicted RBP23.44■■□□□ 1.34
ATG4B-201ENST00000344376 STAC3Q96MF2 364 aa23.44■■□□□ 1.34
ATG4B-201ENST00000344376 YTHDC2Q9H6S0 1430 aaKnown RBP23.44■■□□□ 1.34
ATG4B-201ENST00000344376 JCADQ9P266 1359 aa23.44■■□□□ 1.34
ATG4B-201ENST00000344376 CFAP70Q5T0N1 1121 aa23.43■■□□□ 1.34
ATG4B-201ENST00000344376 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
ATG4B-201ENST00000344376 DCAF11Q8TEB1 546 aa23.42■■□□□ 1.34
ATG4B-201ENST00000344376 KNDC1Q76NI1 1749 aa23.41■■□□□ 1.34
ATG4B-201ENST00000344376 COL16A1Q07092 1604 aaPredicted RBP23.41■■□□□ 1.34
ATG4B-201ENST00000344376 KDM2AQ9Y2K7 1162 aa23.4■■□□□ 1.34
ATG4B-201ENST00000344376 ILDR2Q71H61 639 aa23.4■■□□□ 1.34
ATG4B-201ENST00000344376 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.34
ATG4B-201ENST00000344376 WAPLQ7Z5K2 1190 aa23.38■■□□□ 1.33
ATG4B-201ENST00000344376 CDC42BPGQ6DT37 1551 aa23.38■■□□□ 1.33
ATG4B-201ENST00000344376 SIRT1Q96EB6 747 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms