RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 ZFYVE9O95405 1425 aa22.8■■□□□ 1.24
TNFRSF12A-202ENST00000341627 UBAP1LF5GYI3 381 aa22.79■■□□□ 1.24
TNFRSF12A-202ENST00000341627 FOXD1Q16676 465 aa22.77■■□□□ 1.24
TNFRSF12A-202ENST00000341627 SLC26A8Q96RN1 970 aa22.77■■□□□ 1.24
TNFRSF12A-202ENST00000341627 TMEM131LA2VDJ0 1609 aa22.77■■□□□ 1.24
TNFRSF12A-202ENST00000341627 RIMS2Q9UQ26 1411 aa22.76■■□□□ 1.23
TNFRSF12A-202ENST00000341627 HDGFP51858 240 aaKnown RBP22.76■■□□□ 1.23
TNFRSF12A-202ENST00000341627 LRRC7Q96NW7 1537 aa22.74■■□□□ 1.23
TNFRSF12A-202ENST00000341627 PLEKHG1Q9ULL1 1385 aa22.73■■□□□ 1.23
TNFRSF12A-202ENST00000341627 CLTCL1P53675 1640 aa22.72■■□□□ 1.23
TNFRSF12A-202ENST00000341627 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.72■■□□□ 1.23
TNFRSF12A-202ENST00000341627 STRCP1A6NGW2 1772 aa22.71■■□□□ 1.23
TNFRSF12A-202ENST00000341627 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF12A-202ENST00000341627 NUTM2DQ5VT03 806 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF12A-202ENST00000341627 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF12A-202ENST00000341627 KCNA6P17658 529 aa22.7■■□□□ 1.22
TNFRSF12A-202ENST00000341627 BCANQ96GW7 911 aa22.7■■□□□ 1.22
TNFRSF12A-202ENST00000341627 CCDC144AA2RUR9 1427 aa22.7■■□□□ 1.22
TNFRSF12A-202ENST00000341627 MYO5BQ9ULV0 1848 aa22.7■■□□□ 1.22
TNFRSF12A-202ENST00000341627 TOM1O60784 492 aa22.68■■□□□ 1.22
TNFRSF12A-202ENST00000341627 ZNF326Q5BKZ1 582 aaKnown RBP22.68■■□□□ 1.22
TNFRSF12A-202ENST00000341627 KIF1BO60333 1816 aa22.67■■□□□ 1.22
TNFRSF12A-202ENST00000341627 TBX22Q9Y458 520 aa22.66■■□□□ 1.22
TNFRSF12A-202ENST00000341627 PIP4K2BP78356 416 aa22.64■■□□□ 1.21
TNFRSF12A-202ENST00000341627 ADAMTS13Q76LX8 1427 aa22.64■■□□□ 1.21
TNFRSF12A-202ENST00000341627 ALKQ9UM73 1620 aa22.63■■□□□ 1.21
TNFRSF12A-202ENST00000341627 TMEM94Q12767 1356 aa22.62■■□□□ 1.21
TNFRSF12A-202ENST00000341627 PROSER2Q86WR7 435 aaPredicted RBP22.6■■□□□ 1.21
TNFRSF12A-202ENST00000341627 RBM33Q96EV2 1170 aaKnown RBP22.6■■□□□ 1.21
TNFRSF12A-202ENST00000341627 ANKRD30BQ9BXX2 1392 aa22.6■■□□□ 1.21
TNFRSF12A-202ENST00000341627 RPGRIP1LQ68CZ1 1315 aa22.59■■□□□ 1.21
TNFRSF12A-202ENST00000341627 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
TNFRSF12A-202ENST00000341627 NWD1Q149M9 1564 aa22.56■■□□□ 1.2
TNFRSF12A-202ENST00000341627 HSPA1LP34931 641 aa22.56■■□□□ 1.2
TNFRSF12A-202ENST00000341627 NEXMIFQ5QGS0 1516 aa22.56■■□□□ 1.2
TNFRSF12A-202ENST00000341627 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
TNFRSF12A-202ENST00000341627 NKTRP30414 1462 aaKnown RBP22.55■■□□□ 1.2
TNFRSF12A-202ENST00000341627 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
TNFRSF12A-202ENST00000341627 PIK3R4Q99570 1358 aa22.54■■□□□ 1.2
TNFRSF12A-202ENST00000341627 RGL3Q3MIN7 710 aa22.54■■□□□ 1.2
TNFRSF12A-202ENST00000341627 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
TNFRSF12A-202ENST00000341627 PTPRUQ92729 1446 aa22.5■■□□□ 1.19
TNFRSF12A-202ENST00000341627 AMOTL2Q9Y2J4 779 aa22.5■■□□□ 1.19
TNFRSF12A-202ENST00000341627 SETBP1Q9Y6X0 1596 aa22.5■■□□□ 1.19
TNFRSF12A-202ENST00000341627 XIRP1Q702N8 1843 aaKnown RBP22.5■■□□□ 1.19
TNFRSF12A-202ENST00000341627 METP08581 1390 aa22.49■■□□□ 1.19
TNFRSF12A-202ENST00000341627 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
TNFRSF12A-202ENST00000341627 NRXN3Q9Y4C0 1643 aa22.48■■□□□ 1.19
TNFRSF12A-202ENST00000341627 PPLO60437 1756 aa22.47■■□□□ 1.19
TNFRSF12A-202ENST00000341627 CHD2O14647 1828 aaKnown RBP22.47■■□□□ 1.19
TNFRSF12A-202ENST00000341627 DHX57Q6P158 1386 aaKnown RBP22.45■■□□□ 1.18
TNFRSF12A-202ENST00000341627 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.18
TNFRSF12A-202ENST00000341627 MSH6P52701 1360 aa22.44■■□□□ 1.18
TNFRSF12A-202ENST00000341627 FAM135BQ49AJ0 1406 aa22.43■■□□□ 1.18
TNFRSF12A-202ENST00000341627 IFT172Q9UG01 1749 aa22.41■■□□□ 1.18
TNFRSF12A-202ENST00000341627 ADGRF5Q8IZF2 1346 aa22.4■■□□□ 1.18
TNFRSF12A-202ENST00000341627 C19orf44Q9H6X5 657 aa22.4■■□□□ 1.18
TNFRSF12A-202ENST00000341627 SLAIN2Q9P270 581 aa22.4■■□□□ 1.18
TNFRSF12A-202ENST00000341627 DISP3Q9P2K9 1392 aa22.39■■□□□ 1.18
TNFRSF12A-202ENST00000341627 C14orf37Q86TY3 774 aa22.38■■□□□ 1.17
TNFRSF12A-202ENST00000341627 STAC3Q96MF2 364 aa22.38■■□□□ 1.17
TNFRSF12A-202ENST00000341627 MYOM2P54296 1465 aa22.38■■□□□ 1.17
TNFRSF12A-202ENST00000341627 DCAF11Q8TEB1 546 aa22.36■■□□□ 1.17
TNFRSF12A-202ENST00000341627 XRN1Q8IZH2 1706 aaKnown RBP22.35■■□□□ 1.17
TNFRSF12A-202ENST00000341627 PIK3C2GO75747 1445 aa22.35■■□□□ 1.17
TNFRSF12A-202ENST00000341627 CADPS2Q86UW7 1296 aa22.34■■□□□ 1.17
TNFRSF12A-202ENST00000341627 KDM2AQ9Y2K7 1162 aa22.33■■□□□ 1.17
TNFRSF12A-202ENST00000341627 NRXN1Q9ULB1 1477 aa22.33■■□□□ 1.16
TNFRSF12A-202ENST00000341627 ATF3P18847 181 aa22.32■■□□□ 1.16
TNFRSF12A-202ENST00000341627 SIN3AQ96ST3 1273 aa22.32■■□□□ 1.16
TNFRSF12A-202ENST00000341627 ROBO2Q9HCK4 1378 aa22.3■■□□□ 1.16
TNFRSF12A-202ENST00000341627 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
TNFRSF12A-202ENST00000341627 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
TNFRSF12A-202ENST00000341627 C14orf93Q9H972 538 aaKnown RBP22.29■■□□□ 1.16
TNFRSF12A-202ENST00000341627 PRAG1Q86YV5 1406 aa22.28■■□□□ 1.16
TNFRSF12A-202ENST00000341627 ROBO1Q9Y6N7 1651 aa22.27■■□□□ 1.16
TNFRSF12A-202ENST00000341627 DCCP43146 1447 aa22.27■■□□□ 1.16
TNFRSF12A-202ENST00000341627 PTCH1Q13635 1447 aa22.27■■□□□ 1.16
TNFRSF12A-202ENST00000341627 ILDR2Q71H61 639 aa22.27■■□□□ 1.16
TNFRSF12A-202ENST00000341627 LAMC1P11047 1609 aa22.27■■□□□ 1.16
TNFRSF12A-202ENST00000341627 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.26■■□□□ 1.15
TNFRSF12A-202ENST00000341627 ADGRL3Q9HAR2 1447 aa22.25■■□□□ 1.15
TNFRSF12A-202ENST00000341627 CFAP70Q5T0N1 1121 aa22.25■■□□□ 1.15
TNFRSF12A-202ENST00000341627 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
TNFRSF12A-202ENST00000341627 BRINP3Q76B58 766 aa22.22■■□□□ 1.15
TNFRSF12A-202ENST00000341627 L3MBTL2Q969R5 705 aa22.22■■□□□ 1.15
TNFRSF12A-202ENST00000341627 LRPPRCP42704 1394 aaKnown RBP22.22■■□□□ 1.15
TNFRSF12A-202ENST00000341627 MST1RQ04912 1400 aa22.22■■□□□ 1.15
TNFRSF12A-202ENST00000341627 MED1Q15648 1581 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF12A-202ENST00000341627 STK26Q9P289 416 aa22.21■■□□□ 1.15
TNFRSF12A-202ENST00000341627 ASXL1Q8IXJ9 1541 aa22.2■■□□□ 1.14
TNFRSF12A-202ENST00000341627 ABCC11Q96J66 1382 aa22.19■■□□□ 1.14
TNFRSF12A-202ENST00000341627 YTHDC2Q9H6S0 1430 aaKnown RBP22.19■■□□□ 1.14
TNFRSF12A-202ENST00000341627 TECPR2O15040 1411 aa22.18■■□□□ 1.14
TNFRSF12A-202ENST00000341627 TONSLQ96HA7 1378 aa22.18■■□□□ 1.14
TNFRSF12A-202ENST00000341627 CLSPNQ9HAW4 1339 aa22.17■■□□□ 1.14
TNFRSF12A-202ENST00000341627 WAPLQ7Z5K2 1190 aa22.16■■□□□ 1.14
TNFRSF12A-202ENST00000341627 SIRT1Q96EB6 747 aa22.14■■□□□ 1.13
TNFRSF12A-202ENST00000341627 KNDC1Q76NI1 1749 aa22.14■■□□□ 1.13
TNFRSF12A-202ENST00000341627 JCADQ9P266 1359 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms