RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 SBNO2Q9Y2G9 1366 aa10.18□□□□□ -0.78
NUP43-201ENST00000340413 MYO5BQ9ULV0 1848 aa10.18□□□□□ -0.78
NUP43-201ENST00000340413 ARHGAP23Q9P227 1491 aa10.18□□□□□ -0.78
NUP43-201ENST00000340413 A2ML1A8K2U0 1454 aa10.18□□□□□ -0.78
NUP43-201ENST00000340413 SCAF11Q99590 1463 aaKnown RBP10.17□□□□□ -0.78
NUP43-201ENST00000340413 FOXD1Q16676 465 aa10.17□□□□□ -0.78
NUP43-201ENST00000340413 ROCK2O75116 1388 aaKnown RBP10.17□□□□□ -0.78
NUP43-201ENST00000340413 GGT6Q6P531 493 aa10.17□□□□□ -0.78
NUP43-201ENST00000340413 ADGRB1O14514 1584 aa10.17□□□□□ -0.78
NUP43-201ENST00000340413 EIF3AQ14152 1382 aaKnown RBP10.17□□□□□ -0.78
NUP43-201ENST00000340413 TNRQ92752 1358 aa10.17□□□□□ -0.78
NUP43-201ENST00000340413 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
NUP43-201ENST00000340413 RIMS1Q86UR5 1692 aaKnown RBP10.16□□□□□ -0.78
NUP43-201ENST00000340413 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUP43-201ENST00000340413 HDGFP51858 240 aaKnown RBP10.13□□□□□ -0.79
NUP43-201ENST00000340413 NBPF8Q3BBV2 869 aa10.13□□□□□ -0.79
NUP43-201ENST00000340413 PUS7Q96PZ0 661 aaKnown RBP10.13□□□□□ -0.79
NUP43-201ENST00000340413 VGFO15240 615 aaPredicted RBP10.13□□□□□ -0.79
NUP43-201ENST00000340413 ESF1Q9H501 851 aaKnown RBP10.13□□□□□ -0.79
NUP43-201ENST00000340413 ARHGEF28Q8N1W1 1705 aaKnown RBP10.13□□□□□ -0.79
NUP43-201ENST00000340413 CEP170BQ9Y4F5 1589 aaPredicted RBP10.13□□□□□ -0.79
NUP43-201ENST00000340413 USP47Q96K76 1375 aa10.13□□□□□ -0.79
NUP43-201ENST00000340413 NRXN3Q9Y4C0 1643 aa10.13□□□□□ -0.79
NUP43-201ENST00000340413 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
NUP43-201ENST00000340413 CPS1P31327 1500 aa10.11□□□□□ -0.79
NUP43-201ENST00000340413 SETD1BQ9UPS6 1966 aaKnown RBP10.11□□□□□ -0.79
NUP43-201ENST00000340413 ALKQ9UM73 1620 aa10.1□□□□□ -0.79
NUP43-201ENST00000340413 TECPR2O15040 1411 aa10.1□□□□□ -0.79
NUP43-201ENST00000340413 SIRT1Q96EB6 747 aa10.1□□□□□ -0.79
NUP43-201ENST00000340413 C14orf93Q9H972 538 aaKnown RBP10.1□□□□□ -0.79
NUP43-201ENST00000340413 RIMS2Q9UQ26 1411 aa10.1□□□□□ -0.79
NUP43-201ENST00000340413 MED14O60244 1454 aa10.09□□□□□ -0.79
NUP43-201ENST00000340413 QRICH2Q9H0J4 1663 aa10.09□□□□□ -0.79
NUP43-201ENST00000340413 KTN1Q86UP2 1357 aaKnown RBP10.09□□□□□ -0.79
NUP43-201ENST00000340413 ADGRB2O60241 1585 aa10.09□□□□□ -0.79
NUP43-201ENST00000340413 PLEKHG1Q9ULL1 1385 aa10.09□□□□□ -0.79
NUP43-201ENST00000340413 USP32Q8NFA0 1604 aa10.08□□□□□ -0.8
NUP43-201ENST00000340413 IDI1Q13907 227 aa10.08□□□□□ -0.8
NUP43-201ENST00000340413 PIK3R4Q99570 1358 aa10.08□□□□□ -0.8
NUP43-201ENST00000340413 ASXL1Q8IXJ9 1541 aa10.08□□□□□ -0.8
NUP43-201ENST00000340413 CCDC7Q96M83 1385 aa10.08□□□□□ -0.8
NUP43-201ENST00000340413 TMEM2Q9UHN6 1383 aa10.07□□□□□ -0.8
NUP43-201ENST00000340413 HSPA5P11021 654 aaKnown RBP10.07□□□□□ -0.8
NUP43-201ENST00000340413 CFAP65Q6ZU64 1925 aaKnown RBP10.07□□□□□ -0.8
NUP43-201ENST00000340413 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
NUP43-201ENST00000340413 FAM135BQ49AJ0 1406 aa10.07□□□□□ -0.8
NUP43-201ENST00000340413 NINLQ9Y2I6 1382 aa10.06□□□□□ -0.8
NUP43-201ENST00000340413 CARD11Q9BXL7 1154 aa10.06□□□□□ -0.8
NUP43-201ENST00000340413 XRN1Q8IZH2 1706 aaKnown RBP10.05□□□□□ -0.8
NUP43-201ENST00000340413 WASHC2AQ641Q2 1341 aa10.05□□□□□ -0.8
NUP43-201ENST00000340413 MYOM1P52179 1685 aa10.05□□□□□ -0.8
NUP43-201ENST00000340413 LRPPRCP42704 1394 aaKnown RBP10.04□□□□□ -0.8
NUP43-201ENST00000340413 PTPRMP28827 1452 aa10.04□□□□□ -0.8
NUP43-201ENST00000340413 NWD1Q149M9 1564 aa10.04□□□□□ -0.8
NUP43-201ENST00000340413 ABCC11Q96J66 1382 aa10.03□□□□□ -0.8
NUP43-201ENST00000340413 DIEXFQ68CQ4 756 aaKnown RBP10.03□□□□□ -0.8
NUP43-201ENST00000340413 PTCH1Q13635 1447 aa10.02□□□□□ -0.8
NUP43-201ENST00000340413 ADGRF5Q8IZF2 1346 aa10.02□□□□□ -0.81
NUP43-201ENST00000340413 NPC1L1Q9UHC9 1359 aa10.02□□□□□ -0.81
NUP43-201ENST00000340413 YTHDC2Q9H6S0 1430 aaKnown RBP10.01□□□□□ -0.81
NUP43-201ENST00000340413 THEMISQ8N1K5 641 aaPredicted RBP10.01□□□□□ -0.81
NUP43-201ENST00000340413 ZNF326Q5BKZ1 582 aaKnown RBP10□□□□□ -0.81
NUP43-201ENST00000340413 RGL3Q3MIN7 710 aa10□□□□□ -0.81
NUP43-201ENST00000340413 FBXO31Q5XUX0 539 aaPredicted RBP10□□□□□ -0.81
NUP43-201ENST00000340413 TESK2Q96S53 571 aa10□□□□□ -0.81
NUP43-201ENST00000340413 TMF1P82094 1093 aa10□□□□□ -0.81
NUP43-201ENST00000340413 ADAMTS13Q76LX8 1427 aa9.99□□□□□ -0.81
NUP43-201ENST00000340413 CHD2O14647 1828 aaKnown RBP9.99□□□□□ -0.81
NUP43-201ENST00000340413 CCER2I3L3R5 266 aa9.99□□□□□ -0.81
NUP43-201ENST00000340413 KIF7Q2M1P5 1343 aa9.99□□□□□ -0.81
NUP43-201ENST00000340413 KDM2AQ9Y2K7 1162 aa9.98□□□□□ -0.81
NUP43-201ENST00000340413 ITSN1Q15811 1721 aa9.98□□□□□ -0.81
NUP43-201ENST00000340413 TOPAZ1Q8N9V7 1692 aa9.98□□□□□ -0.81
NUP43-201ENST00000340413 INSRP06213 1382 aa9.98□□□□□ -0.81
NUP43-201ENST00000340413 ANKRD26Q9UPS8 1709 aa9.97□□□□□ -0.81
NUP43-201ENST00000340413 TBX22Q9Y458 520 aa9.97□□□□□ -0.81
NUP43-201ENST00000340413 CENPJQ9HC77 1338 aaPredicted RBP9.97□□□□□ -0.81
NUP43-201ENST00000340413 EID1Q9Y6B2 187 aa9.97□□□□□ -0.81
NUP43-201ENST00000340413 TULP4Q9NRJ4 1543 aa9.96□□□□□ -0.81
NUP43-201ENST00000340413 NCOA3Q9Y6Q9 1424 aa9.96□□□□□ -0.81
NUP43-201ENST00000340413 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
NUP43-201ENST00000340413 NBPF1Q3BBV0 1214 aa9.96□□□□□ -0.82
NUP43-201ENST00000340413 MLECQ14165 292 aa9.95□□□□□ -0.82
NUP43-201ENST00000340413 USP54Q70EL1 1684 aa9.95□□□□□ -0.82
NUP43-201ENST00000340413 NKTRP30414 1462 aaKnown RBP9.95□□□□□ -0.82
NUP43-201ENST00000340413 ST20-MTHFSA0A0A6YYL1 179 aa9.95□□□□□ -0.82
NUP43-201ENST00000340413 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
NUP43-201ENST00000340413 LRRC7Q96NW7 1537 aa9.94□□□□□ -0.82
NUP43-201ENST00000340413 ATAD2Q6PL18 1390 aa9.94□□□□□ -0.82
NUP43-201ENST00000340413 ATP7BP35670 1465 aa9.94□□□□□ -0.82
NUP43-201ENST00000340413 CDC42BPGQ6DT37 1551 aa9.94□□□□□ -0.82
NUP43-201ENST00000340413 NSD2O96028 1365 aa9.94□□□□□ -0.82
NUP43-201ENST00000340413 AKAP12Q02952 1782 aa9.93□□□□□ -0.82
NUP43-201ENST00000340413 CHGAP10645 457 aaKnown RBP9.93□□□□□ -0.82
NUP43-201ENST00000340413 BRD4O60885 1362 aaPredicted RBP9.92□□□□□ -0.82
NUP43-201ENST00000340413 DISP3Q9P2K9 1392 aa9.92□□□□□ -0.82
NUP43-201ENST00000340413 LMTK3Q96Q04 1460 aa9.92□□□□□ -0.82
NUP43-201ENST00000340413 ANKARQ7Z5J8 1434 aa9.92□□□□□ -0.82
NUP43-201ENST00000340413 MON2Q7Z3U7 1717 aa9.92□□□□□ -0.82
NUP43-201ENST00000340413 EVC2Q86UK5 1308 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms