RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
NECAP1-201ENST00000339754 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
NECAP1-201ENST00000339754 GZF1Q9H116 711 aaPredicted RBP12.05□□□□□ -0.48
NECAP1-201ENST00000339754 MRE11P49959 708 aa12.04□□□□□ -0.48
NECAP1-201ENST00000339754 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
NECAP1-201ENST00000339754 ESPNB1AK53 854 aa12.04□□□□□ -0.48
NECAP1-201ENST00000339754 TBC1D32Q96NH3 1257 aa12.04□□□□□ -0.48
NECAP1-201ENST00000339754 ERBB4Q15303 1308 aa12.04□□□□□ -0.48
NECAP1-201ENST00000339754 BCAR3O75815 825 aa12.03□□□□□ -0.48
NECAP1-201ENST00000339754 TESK2Q96S53 571 aa12.03□□□□□ -0.48
NECAP1-201ENST00000339754 ITSN2Q9NZM3 1697 aa12.03□□□□□ -0.48
NECAP1-201ENST00000339754 COL17A1Q9UMD9 1497 aaPredicted RBP12.03□□□□□ -0.48
NECAP1-201ENST00000339754 DISP3Q9P2K9 1392 aa12.02□□□□□ -0.48
NECAP1-201ENST00000339754 TRAK2O60296 914 aa12.02□□□□□ -0.48
NECAP1-201ENST00000339754 NBPF1Q3BBV0 1214 aa12.02□□□□□ -0.48
NECAP1-201ENST00000339754 MAPK8IP2Q13387 824 aaPredicted RBP12.02□□□□□ -0.49
NECAP1-201ENST00000339754 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
NECAP1-201ENST00000339754 TRPM1Q7Z4N2 1603 aa12.02□□□□□ -0.49
NECAP1-201ENST00000339754 NUP155O75694 1391 aa12.02□□□□□ -0.49
NECAP1-201ENST00000339754 ANKRD50Q9ULJ7 1429 aa12.01□□□□□ -0.49
NECAP1-201ENST00000339754 ABCC10Q5T3U5 1492 aa12.01□□□□□ -0.49
NECAP1-201ENST00000339754 MYH16Q9H6N6 1097 aa12.01□□□□□ -0.49
NECAP1-201ENST00000339754 GRPEL1Q9HAV7 217 aa12.01□□□□□ -0.49
NECAP1-201ENST00000339754 ANKRD30AQ9BXX3 1397 aa12.01□□□□□ -0.49
NECAP1-201ENST00000339754 CLASP1Q7Z460 1538 aa12.01□□□□□ -0.49
NECAP1-201ENST00000339754 CENPJQ9HC77 1338 aaPredicted RBP12□□□□□ -0.49
NECAP1-201ENST00000339754 PRAG1Q86YV5 1406 aa12□□□□□ -0.49
NECAP1-201ENST00000339754 PPP2R1AP30153 589 aa12□□□□□ -0.49
NECAP1-201ENST00000339754 PDCL3Q9H2J4 239 aa12□□□□□ -0.49
NECAP1-201ENST00000339754 KDM5DQ9BY66 1539 aa12□□□□□ -0.49
NECAP1-201ENST00000339754 CDC42BPAQ5VT25 1732 aa11.99□□□□□ -0.49
NECAP1-201ENST00000339754 GPRASP1Q5JY77 1395 aa11.99□□□□□ -0.49
NECAP1-201ENST00000339754 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
NECAP1-201ENST00000339754 CROCC2H7BZ55 1655 aa11.99□□□□□ -0.49
NECAP1-201ENST00000339754 NKTRP30414 1462 aaKnown RBP11.99□□□□□ -0.49
NECAP1-201ENST00000339754 CGNL1Q0VF96 1302 aa11.99□□□□□ -0.49
NECAP1-201ENST00000339754 TPM2P07951 284 aa11.99□□□□□ -0.49
NECAP1-201ENST00000339754 PDE3AQ14432 1141 aa11.99□□□□□ -0.49
NECAP1-201ENST00000339754 CLUAP1Q96AJ1 413 aa11.99□□□□□ -0.49
NECAP1-201ENST00000339754 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
NECAP1-201ENST00000339754 UPF2Q9HAU5 1272 aaKnown RBP11.98□□□□□ -0.49
NECAP1-201ENST00000339754 CHMP5Q9NZZ3 219 aa11.98□□□□□ -0.49
NECAP1-201ENST00000339754 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
NECAP1-201ENST00000339754 ISY1Q9ULR0 285 aaKnown RBP11.97□□□□□ -0.49
NECAP1-201ENST00000339754 ERBINQ96RT1 1412 aa11.97□□□□□ -0.49
NECAP1-201ENST00000339754 ZMYM3Q14202 1370 aa11.96□□□□□ -0.49
NECAP1-201ENST00000339754 ABCC2Q92887 1545 aa11.96□□□□□ -0.49
NECAP1-201ENST00000339754 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.5
NECAP1-201ENST00000339754 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
NECAP1-201ENST00000339754 PRDM15P57071 1507 aaPredicted RBP11.95□□□□□ -0.5
NECAP1-201ENST00000339754 PANK1Q8TE04 598 aa11.95□□□□□ -0.5
NECAP1-201ENST00000339754 GAS2L3Q86XJ1 694 aa11.94□□□□□ -0.5
NECAP1-201ENST00000339754 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
NECAP1-201ENST00000339754 LAMC1P11047 1609 aa11.94□□□□□ -0.5
NECAP1-201ENST00000339754 MAGI2Q86UL8 1455 aa11.94□□□□□ -0.5
NECAP1-201ENST00000339754 E9PSI1 815 aa11.94□□□□□ -0.5
NECAP1-201ENST00000339754 TMF1P82094 1093 aa11.94□□□□□ -0.5
NECAP1-201ENST00000339754 CCDC146Q8IYE0 955 aa11.94□□□□□ -0.5
NECAP1-201ENST00000339754 PODXL2Q9NZ53 605 aa11.94□□□□□ -0.5
NECAP1-201ENST00000339754 PRDM4Q9UKN5 801 aa11.94□□□□□ -0.5
NECAP1-201ENST00000339754 APAF1O14727 1248 aa11.93□□□□□ -0.5
NECAP1-201ENST00000339754 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
NECAP1-201ENST00000339754 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
NECAP1-201ENST00000339754 PDZRN3Q9UPQ7 1066 aa11.93□□□□□ -0.5
NECAP1-201ENST00000339754 PCDHB15Q9Y5E8 787 aa11.93□□□□□ -0.5
NECAP1-201ENST00000339754 RTEL1-TNFRSF6BF6WH68 1400 aa11.93□□□□□ -0.5
NECAP1-201ENST00000339754 DDX11L8A8MPP1 907 aa11.92□□□□□ -0.5
NECAP1-201ENST00000339754 TSPY4P0CV99 314 aa11.92□□□□□ -0.5
NECAP1-201ENST00000339754 TSPY10P0CW01 314 aa11.92□□□□□ -0.5
NECAP1-201ENST00000339754 TRIM44Q96DX7 344 aaPredicted RBP11.92□□□□□ -0.5
NECAP1-201ENST00000339754 WDR7Q9Y4E6 1490 aa11.92□□□□□ -0.5
NECAP1-201ENST00000339754 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
NECAP1-201ENST00000339754 C9orf84Q5VXU9 1444 aa11.92□□□□□ -0.5
NECAP1-201ENST00000339754 DDIT3P35638 169 aa11.91□□□□□ -0.5
NECAP1-201ENST00000339754 KIAA1211Q6ZU35 1233 aa11.91□□□□□ -0.5
NECAP1-201ENST00000339754 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
NECAP1-201ENST00000339754 TTC37Q6PGP7 1564 aa11.91□□□□□ -0.5
NECAP1-201ENST00000339754 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
NECAP1-201ENST00000339754 RGL3Q3MIN7 710 aa11.91□□□□□ -0.5
NECAP1-201ENST00000339754 KNSTRNQ9Y448 316 aa11.91□□□□□ -0.5
NECAP1-201ENST00000339754 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.91□□□□□ -0.5
NECAP1-201ENST00000339754 PIK3C2GO75747 1445 aa11.9□□□□□ -0.5
NECAP1-201ENST00000339754 C22orf23Q9BZE7 217 aa11.9□□□□□ -0.5
NECAP1-201ENST00000339754 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
NECAP1-201ENST00000339754 PREX2Q70Z35 1606 aa11.9□□□□□ -0.5
NECAP1-201ENST00000339754 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
NECAP1-201ENST00000339754 CCDC144AA2RUR9 1427 aa11.89□□□□□ -0.51
NECAP1-201ENST00000339754 A2MP01023 1474 aa11.89□□□□□ -0.51
NECAP1-201ENST00000339754 ARHGAP5Q13017 1502 aa11.89□□□□□ -0.51
NECAP1-201ENST00000339754 RIPK4P57078 832 aa11.89□□□□□ -0.51
NECAP1-201ENST00000339754 AAMPQ13685 434 aa11.89□□□□□ -0.51
NECAP1-201ENST00000339754 OFD1O75665 1012 aa11.88□□□□□ -0.51
NECAP1-201ENST00000339754 SHANK2Q9UPX8 1470 aa11.88□□□□□ -0.51
NECAP1-201ENST00000339754 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
NECAP1-201ENST00000339754 PPP1R9BQ96SB3 815 aa11.88□□□□□ -0.51
NECAP1-201ENST00000339754 NCOA3Q9Y6Q9 1424 aa11.88□□□□□ -0.51
NECAP1-201ENST00000339754 UHRF1BP1LA0JNW5 1464 aa11.88□□□□□ -0.51
NECAP1-201ENST00000339754 CANXP27824 592 aaKnown RBP11.87□□□□□ -0.51
NECAP1-201ENST00000339754 PLXNC1O60486 1568 aa11.87□□□□□ -0.51
NECAP1-201ENST00000339754 RLBP1P12271 317 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms