RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 MADDQ8WXG6 1647 aa10.17□□□□□ -0.78
SRFBP1-201ENST00000339397 NOS1P29475 1434 aa10.17□□□□□ -0.78
SRFBP1-201ENST00000339397 SIGLEC1Q9BZZ2 1709 aa10.16□□□□□ -0.78
SRFBP1-201ENST00000339397 PER1O15534 1290 aaPredicted RBP10.16□□□□□ -0.78
SRFBP1-201ENST00000339397 PANK3Q9H999 370 aa10.16□□□□□ -0.78
SRFBP1-201ENST00000339397 MROH2AA6NES4 1674 aa10.16□□□□□ -0.78
SRFBP1-201ENST00000339397 TMF1P82094 1093 aa10.14□□□□□ -0.79
SRFBP1-201ENST00000339397 CC2D1BQ5T0F9 858 aaKnown RBP10.14□□□□□ -0.79
SRFBP1-201ENST00000339397 TRAK1Q9UPV9 953 aa10.14□□□□□ -0.79
SRFBP1-201ENST00000339397 TRHP20396 242 aaPredicted RBP10.13□□□□□ -0.79
SRFBP1-201ENST00000339397 KIF1BO60333 1816 aa10.13□□□□□ -0.79
SRFBP1-201ENST00000339397 KIF13AQ9H1H9 1805 aa10.13□□□□□ -0.79
SRFBP1-201ENST00000339397 SYNMO15061 1565 aa10.12□□□□□ -0.79
SRFBP1-201ENST00000339397 STAC3Q96MF2 364 aa10.12□□□□□ -0.79
SRFBP1-201ENST00000339397 CAMSAP1Q5T5Y3 1602 aa10.12□□□□□ -0.79
SRFBP1-201ENST00000339397 SCAF11Q99590 1463 aaKnown RBP10.12□□□□□ -0.79
SRFBP1-201ENST00000339397 ADGRB3O60242 1522 aa10.11□□□□□ -0.79
SRFBP1-201ENST00000339397 C14orf93Q9H972 538 aaKnown RBP10.11□□□□□ -0.79
SRFBP1-201ENST00000339397 ZMYM4Q5VZL5 1548 aa10.1□□□□□ -0.79
SRFBP1-201ENST00000339397 TMC1Q8TDI8 760 aa10.1□□□□□ -0.79
SRFBP1-201ENST00000339397 SUPT16HQ9Y5B9 1047 aaKnown RBP10.1□□□□□ -0.79
SRFBP1-201ENST00000339397 LAMC1P11047 1609 aa10.1□□□□□ -0.79
SRFBP1-201ENST00000339397 SAFB2Q14151 953 aaKnown RBP eCLIP10.09□□□□□ -0.79
SRFBP1-201ENST00000339397 MYOM2P54296 1465 aa10.09□□□□□ -0.79
SRFBP1-201ENST00000339397 PNISRQ8TF01 805 aaKnown RBP10.09□□□□□ -0.79
SRFBP1-201ENST00000339397 ARHGAP31Q2M1Z3 1444 aa10.09□□□□□ -0.79
SRFBP1-201ENST00000339397 SLC52A1Q9NWF4 448 aa10.08□□□□□ -0.8
SRFBP1-201ENST00000339397 IQGAP1P46940 1657 aa10.08□□□□□ -0.8
SRFBP1-201ENST00000339397 PIK3C2GO75747 1445 aa10.08□□□□□ -0.8
SRFBP1-201ENST00000339397 NRXN1Q9ULB1 1477 aa10.08□□□□□ -0.8
SRFBP1-201ENST00000339397 STK26Q9P289 416 aa10.08□□□□□ -0.8
SRFBP1-201ENST00000339397 BCANQ96GW7 911 aa10.08□□□□□ -0.8
SRFBP1-201ENST00000339397 IFT172Q9UG01 1749 aa10.07□□□□□ -0.8
SRFBP1-201ENST00000339397 VGFO15240 615 aaPredicted RBP10.07□□□□□ -0.8
SRFBP1-201ENST00000339397 NEURL4Q96JN8 1562 aa10.07□□□□□ -0.8
SRFBP1-201ENST00000339397 MYBBP1AQ9BQG0 1328 aaKnown RBP10.06□□□□□ -0.8
SRFBP1-201ENST00000339397 FKBP8Q14318 412 aa10.06□□□□□ -0.8
SRFBP1-201ENST00000339397 STAG3Q9UJ98 1225 aa10.06□□□□□ -0.8
SRFBP1-201ENST00000339397 RPGRIP1LQ68CZ1 1315 aa10.06□□□□□ -0.8
SRFBP1-201ENST00000339397 RALBP1Q15311 655 aa10.06□□□□□ -0.8
SRFBP1-201ENST00000339397 PIK3C2BO00750 1634 aa10.06□□□□□ -0.8
SRFBP1-201ENST00000339397 PPLO60437 1756 aa10.05□□□□□ -0.8
SRFBP1-201ENST00000339397 KTN1Q86UP2 1357 aaKnown RBP10.05□□□□□ -0.8
SRFBP1-201ENST00000339397 PARD3Q8TEW0 1356 aa10.05□□□□□ -0.8
SRFBP1-201ENST00000339397 CENPJQ9HC77 1338 aaPredicted RBP10.05□□□□□ -0.8
SRFBP1-201ENST00000339397 IRX6P78412 446 aaPredicted RBP10.05□□□□□ -0.8
SRFBP1-201ENST00000339397 CARD14Q9BXL6 1004 aa10.05□□□□□ -0.8
SRFBP1-201ENST00000339397 SALL2Q9Y467 1007 aaPredicted RBP10.05□□□□□ -0.8
SRFBP1-201ENST00000339397 MYO5BQ9ULV0 1848 aa10.05□□□□□ -0.8
SRFBP1-201ENST00000339397 CEBPAP49715 358 aaPredicted RBP10.04□□□□□ -0.8
SRFBP1-201ENST00000339397 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
SRFBP1-201ENST00000339397 NEXMIFQ5QGS0 1516 aa10.04□□□□□ -0.8
SRFBP1-201ENST00000339397 ERVK-7P63135 1459 aa10.04□□□□□ -0.8
SRFBP1-201ENST00000339397 SLC12A5Q9H2X9 1139 aa10.04□□□□□ -0.8
SRFBP1-201ENST00000339397 KNSTRNQ9Y448 316 aa10.04□□□□□ -0.8
SRFBP1-201ENST00000339397 PREX1Q8TCU6 1659 aa10.04□□□□□ -0.8
SRFBP1-201ENST00000339397 EIF3AQ14152 1382 aaKnown RBP10.04□□□□□ -0.8
SRFBP1-201ENST00000339397 ADGRB1O14514 1584 aa10.04□□□□□ -0.8
SRFBP1-201ENST00000339397 ZMYM3Q14202 1370 aa10.03□□□□□ -0.8
SRFBP1-201ENST00000339397 CLTCQ00610 1675 aaKnown RBP10.03□□□□□ -0.8
SRFBP1-201ENST00000339397 NLRP13Q86W25 1043 aa10.03□□□□□ -0.8
SRFBP1-201ENST00000339397 KIAA1210Q9ULL0 1709 aa10.03□□□□□ -0.8
SRFBP1-201ENST00000339397 ESF1Q9H501 851 aaKnown RBP10.02□□□□□ -0.8
SRFBP1-201ENST00000339397 AGLP35573 1532 aa10.02□□□□□ -0.81
SRFBP1-201ENST00000339397 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
SRFBP1-201ENST00000339397 TMEM131LA2VDJ0 1609 aa10.02□□□□□ -0.81
SRFBP1-201ENST00000339397 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.81
SRFBP1-201ENST00000339397 BRD4O60885 1362 aaPredicted RBP10.01□□□□□ -0.81
SRFBP1-201ENST00000339397 ZBED9Q6R2W3 1325 aa10.01□□□□□ -0.81
SRFBP1-201ENST00000339397 CABP2Q9NPB3 220 aa10.01□□□□□ -0.81
SRFBP1-201ENST00000339397 PPP6R1Q9UPN7 881 aa10□□□□□ -0.81
SRFBP1-201ENST00000339397 ARHGEF40Q8TER5 1519 aa10□□□□□ -0.81
SRFBP1-201ENST00000339397 REREQ9P2R6 1566 aa9.99□□□□□ -0.81
SRFBP1-201ENST00000339397 PPP2R1AP30153 589 aa9.99□□□□□ -0.81
SRFBP1-201ENST00000339397 PRAM1Q96QH2 718 aa9.99□□□□□ -0.81
SRFBP1-201ENST00000339397 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
SRFBP1-201ENST00000339397 TNNT2P45379 298 aaPredicted RBP9.99□□□□□ -0.81
SRFBP1-201ENST00000339397 LRPPRCP42704 1394 aaKnown RBP9.98□□□□□ -0.81
SRFBP1-201ENST00000339397 SETBP1Q9Y6X0 1596 aa9.98□□□□□ -0.81
SRFBP1-201ENST00000339397 WAPLQ7Z5K2 1190 aa9.98□□□□□ -0.81
SRFBP1-201ENST00000339397 MYOM1P52179 1685 aa9.98□□□□□ -0.81
SRFBP1-201ENST00000339397 ASXL1Q8IXJ9 1541 aa9.98□□□□□ -0.81
SRFBP1-201ENST00000339397 A2ML1A8K2U0 1454 aa9.98□□□□□ -0.81
SRFBP1-201ENST00000339397 ADAMTS8Q9UP79 889 aa9.97□□□□□ -0.81
SRFBP1-201ENST00000339397 ZFYVE9O95405 1425 aa9.97□□□□□ -0.81
SRFBP1-201ENST00000339397 SBNO2Q9Y2G9 1366 aa9.96□□□□□ -0.81
SRFBP1-201ENST00000339397 POGKQ9P215 609 aa9.96□□□□□ -0.82
SRFBP1-201ENST00000339397 RIMS2Q9UQ26 1411 aa9.96□□□□□ -0.82
SRFBP1-201ENST00000339397 SPATA31D1Q6ZQQ2 1576 aa9.96□□□□□ -0.82
SRFBP1-201ENST00000339397 KDM5AP29375 1690 aaKnown RBP9.95□□□□□ -0.82
SRFBP1-201ENST00000339397 SRPK2P78362 688 aaKnown RBP9.95□□□□□ -0.82
SRFBP1-201ENST00000339397 QRICH2Q9H0J4 1663 aa9.95□□□□□ -0.82
SRFBP1-201ENST00000339397 YTHDC2Q9H6S0 1430 aaKnown RBP9.95□□□□□ -0.82
SRFBP1-201ENST00000339397 PLEKHH1Q9ULM0 1364 aa9.95□□□□□ -0.82
SRFBP1-201ENST00000339397 PELP1Q8IZL8 1130 aaKnown RBP9.95□□□□□ -0.82
SRFBP1-201ENST00000339397 EVC2Q86UK5 1308 aa9.94□□□□□ -0.82
SRFBP1-201ENST00000339397 NEFLP07196 543 aa9.94□□□□□ -0.82
SRFBP1-201ENST00000339397 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
SRFBP1-201ENST00000339397 MYO3AQ8NEV4 1616 aa9.94□□□□□ -0.82
SRFBP1-201ENST00000339397 PTPRMP28827 1452 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms