RNA–Protein interactions for RNA: ENST00000337221.8

SCARA3-202, Transcript of scavenger receptor class A member 3, humanhuman

TSL 1 (best) BASIC

Gene SCARA3, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-202ENST00000337221 CHGAP10645 457 aaKnown RBP38.88■■■■□ 3.81
SCARA3-202ENST00000337221 POLR3GLQ9BT43 218 aa38.88■■■■□ 3.81
SCARA3-202ENST00000337221 TESK2Q96S53 571 aa38.87■■■■□ 3.81
SCARA3-202ENST00000337221 SCAF11Q99590 1463 aaKnown RBP38.85■■■■□ 3.81
SCARA3-202ENST00000337221 RPGRIP1LQ68CZ1 1315 aa38.83■■■■□ 3.81
SCARA3-202ENST00000337221 CLTCQ00610 1675 aaKnown RBP38.82■■■■□ 3.8
SCARA3-202ENST00000337221 PRKRIP1Q9H875 184 aaPredicted RBP38.81■■■■□ 3.8
SCARA3-202ENST00000337221 SLC52A1Q9NWF4 448 aa38.79■■■■□ 3.8
SCARA3-202ENST00000337221 IDI1Q13907 227 aa38.78■■■■□ 3.8
SCARA3-202ENST00000337221 CFAP70Q5T0N1 1121 aa38.78■■■■□ 3.8
SCARA3-202ENST00000337221 ERVK-7P63135 1459 aa38.77■■■■□ 3.8
SCARA3-202ENST00000337221 DISP3Q9P2K9 1392 aa38.76■■■■□ 3.8
SCARA3-202ENST00000337221 PIK3C2GO75747 1445 aa38.75■■■■□ 3.79
SCARA3-202ENST00000337221 NEXMIFQ5QGS0 1516 aa38.75■■■■□ 3.79
SCARA3-202ENST00000337221 FBXO31Q5XUX0 539 aaPredicted RBP38.71■■■■□ 3.79
SCARA3-202ENST00000337221 SETBP1Q9Y6X0 1596 aa38.71■■■■□ 3.79
SCARA3-202ENST00000337221 TMEM131LA2VDJ0 1609 aa38.71■■■■□ 3.79
SCARA3-202ENST00000337221 TMF1P82094 1093 aa38.69■■■■□ 3.78
SCARA3-202ENST00000337221 MLECQ14165 292 aa38.69■■■■□ 3.78
SCARA3-202ENST00000337221 MYO5BQ9ULV0 1848 aa38.68■■■■□ 3.78
SCARA3-202ENST00000337221 SCAF1Q9H7N4 1312 aaKnown RBP38.68■■■■□ 3.78
SCARA3-202ENST00000337221 EIF3AQ14152 1382 aaKnown RBP38.67■■■■□ 3.78
SCARA3-202ENST00000337221 SPATA31D1Q6ZQQ2 1576 aa38.66■■■■□ 3.78
SCARA3-202ENST00000337221 C14orf93Q9H972 538 aaKnown RBP38.64■■■■□ 3.78
SCARA3-202ENST00000337221 ZFYVE9O95405 1425 aa38.6■■■■□ 3.77
SCARA3-202ENST00000337221 ADGRB1O14514 1584 aa38.6■■■■□ 3.77
SCARA3-202ENST00000337221 VGFO15240 615 aaPredicted RBP38.59■■■■□ 3.77
SCARA3-202ENST00000337221 MYO3AQ8NEV4 1616 aa38.58■■■■□ 3.77
SCARA3-202ENST00000337221 CCDC184Q52MB2 194 aa38.56■■■■□ 3.76
SCARA3-202ENST00000337221 TRHP20396 242 aaPredicted RBP38.52■■■■□ 3.76
SCARA3-202ENST00000337221 NUTM2DQ5VT03 806 aaPredicted RBP38.52■■■■□ 3.76
SCARA3-202ENST00000337221 ZMYM3Q14202 1370 aa38.51■■■■□ 3.76
SCARA3-202ENST00000337221 ESF1Q9H501 851 aaKnown RBP38.48■■■■□ 3.75
SCARA3-202ENST00000337221 CDCA8Q53HL2 280 aa38.48■■■■□ 3.75
SCARA3-202ENST00000337221 PER1O15534 1290 aaPredicted RBP38.47■■■■□ 3.75
SCARA3-202ENST00000337221 GTF3C3Q9Y5Q9 886 aa38.46■■■■□ 3.75
SCARA3-202ENST00000337221 SLC24A1O60721 1099 aa38.45■■■■□ 3.75
SCARA3-202ENST00000337221 MRS2Q9HD23 443 aa38.45■■■■□ 3.75
SCARA3-202ENST00000337221 SBNO2Q9Y2G9 1366 aa38.45■■■■□ 3.75
SCARA3-202ENST00000337221 KTN1Q86UP2 1357 aaKnown RBP38.43■■■■□ 3.74
SCARA3-202ENST00000337221 TMEM132EQ6IEE7 984 aa38.43■■■■□ 3.74
SCARA3-202ENST00000337221 A2ML1A8K2U0 1454 aa38.43■■■■□ 3.74
SCARA3-202ENST00000337221 KDM5AP29375 1690 aaKnown RBP38.42■■■■□ 3.74
SCARA3-202ENST00000337221 CNGB1Q14028 1251 aaPredicted RBP38.41■■■■□ 3.74
SCARA3-202ENST00000337221 PANK3Q9H999 370 aa38.41■■■■□ 3.74
SCARA3-202ENST00000337221 MYOM1P52179 1685 aa38.39■■■■□ 3.74
SCARA3-202ENST00000337221 STAG3Q9UJ98 1225 aa38.39■■■■□ 3.74
SCARA3-202ENST00000337221 TRAK1Q9UPV9 953 aa38.39■■■■□ 3.74
SCARA3-202ENST00000337221 CENPJQ9HC77 1338 aaPredicted RBP38.39■■■■□ 3.74
SCARA3-202ENST00000337221 RALBP1Q15311 655 aa38.37■■■■□ 3.73
SCARA3-202ENST00000337221 QRICH2Q9H0J4 1663 aa38.37■■■■□ 3.73
SCARA3-202ENST00000337221 ASXL1Q8IXJ9 1541 aa38.36■■■■□ 3.73
SCARA3-202ENST00000337221 ARHGEF28Q8N1W1 1705 aaKnown RBP38.34■■■■□ 3.73
SCARA3-202ENST00000337221 PARD3Q8TEW0 1356 aa38.32■■■■□ 3.73
SCARA3-202ENST00000337221 DNAJC5Q9H3Z4 198 aa38.3■■■■□ 3.72
SCARA3-202ENST00000337221 TNRQ92752 1358 aa38.29■■■■□ 3.72
SCARA3-202ENST00000337221 MYBBP1AQ9BQG0 1328 aaKnown RBP38.29■■■■□ 3.72
SCARA3-202ENST00000337221 RIMS2Q9UQ26 1411 aa38.28■■■■□ 3.72
SCARA3-202ENST00000337221 ALKQ9UM73 1620 aa38.26■■■■□ 3.72
SCARA3-202ENST00000337221 FAM9BQ8IZU0 186 aa38.26■■■■□ 3.71
SCARA3-202ENST00000337221 HNRNPUQ00839 825 aaKnown RBP eCLIP38.24■■■■□ 3.71
SCARA3-202ENST00000337221 BRD4O60885 1362 aaPredicted RBP38.21■■■■□ 3.71
SCARA3-202ENST00000337221 SENP3Q9H4L4 574 aaPredicted RBP38.18■■■■□ 3.7
SCARA3-202ENST00000337221 FER1L4A9Z1Z3 1794 aa38.17■■■■□ 3.7
SCARA3-202ENST00000337221 UBR1Q8IWV7 1749 aa38.17■■■■□ 3.7
SCARA3-202ENST00000337221 CC2D1BQ5T0F9 858 aaKnown RBP38.16■■■■□ 3.7
SCARA3-202ENST00000337221 YTHDC2Q9H6S0 1430 aaKnown RBP38.16■■■■□ 3.7
SCARA3-202ENST00000337221 SETD1AO15047 1707 aaKnown RBP38.16■■■■□ 3.7
SCARA3-202ENST00000337221 C3P01024 1663 aa38.16■■■■□ 3.7
SCARA3-202ENST00000337221 TMC1Q8TDI8 760 aa38.15■■■■□ 3.7
SCARA3-202ENST00000337221 KNSTRNQ9Y448 316 aa38.14■■■■□ 3.7
SCARA3-202ENST00000337221 PTPRMP28827 1452 aa38.14■■■■□ 3.7
SCARA3-202ENST00000337221 NLRP13Q86W25 1043 aa38.12■■■■□ 3.69
SCARA3-202ENST00000337221 PNISRQ8TF01 805 aaKnown RBP38.12■■■■□ 3.69
SCARA3-202ENST00000337221 AMER1Q5JTC6 1135 aaPredicted RBP38.12■■■■□ 3.69
SCARA3-202ENST00000337221 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.12■■■■□ 3.69
SCARA3-202ENST00000337221 TULP4Q9NRJ4 1543 aa38.12■■■■□ 3.69
SCARA3-202ENST00000337221 STK26Q9P289 416 aa38.11■■■■□ 3.69
SCARA3-202ENST00000337221 NRXN3Q9Y4C0 1643 aa38.11■■■■□ 3.69
SCARA3-202ENST00000337221 NLRP1Q9C000 1473 aa38.09■■■■□ 3.69
SCARA3-202ENST00000337221 CEBPAP49715 358 aaPredicted RBP38.08■■■■□ 3.69
SCARA3-202ENST00000337221 NPC1L1Q9UHC9 1359 aa38.07■■■■□ 3.69
SCARA3-202ENST00000337221 PUS7Q96PZ0 661 aaKnown RBP38.07■■■■□ 3.69
SCARA3-202ENST00000337221 EVC2Q86UK5 1308 aa38.05■■■■□ 3.68
SCARA3-202ENST00000337221 TMEM2Q9UHN6 1383 aa38.04■■■■□ 3.68
SCARA3-202ENST00000337221 LRPPRCP42704 1394 aaKnown RBP38.03■■■■□ 3.68
SCARA3-202ENST00000337221 HDGFP51858 240 aaKnown RBP38.02■■■■□ 3.68
SCARA3-202ENST00000337221 DLC1Q96QB1 1528 aa38.01■■■■□ 3.68
SCARA3-202ENST00000337221 CARD14Q9BXL6 1004 aa38■■■■□ 3.67
SCARA3-202ENST00000337221 ZBED9Q6R2W3 1325 aa37.99■■■■□ 3.67
SCARA3-202ENST00000337221 PRAM1Q96QH2 718 aa37.99■■■■□ 3.67
SCARA3-202ENST00000337221 SAFB2Q14151 953 aaKnown RBP eCLIP37.98■■■■□ 3.67
SCARA3-202ENST00000337221 SLC12A5Q9H2X9 1139 aa37.95■■■■□ 3.66
SCARA3-202ENST00000337221 POGKQ9P215 609 aa37.94■■■■□ 3.66
SCARA3-202ENST00000337221 ABCC11Q96J66 1382 aa37.92■■■■□ 3.66
SCARA3-202ENST00000337221 METP08581 1390 aa37.9■■■■□ 3.66
SCARA3-202ENST00000337221 PPP2R1AP30153 589 aa37.89■■■■□ 3.66
SCARA3-202ENST00000337221 CABP2Q9NPB3 220 aa37.89■■■■□ 3.66
SCARA3-202ENST00000337221 MINK1Q8N4C8 1332 aaPredicted RBP37.88■■■■□ 3.66
SCARA3-202ENST00000337221 NSD3Q9BZ95 1437 aa37.86■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms