RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 IGSF3O75054 1194 aa10.65□□□□□ -0.71
TDP1-201ENST00000335725 ZNF710Q8N1W2 664 aa10.65□□□□□ -0.71
TDP1-201ENST00000335725 PUS7Q96PZ0 661 aaKnown RBP10.65□□□□□ -0.71
TDP1-201ENST00000335725 FEZ2Q9UHY8 353 aaPredicted RBP10.65□□□□□ -0.71
TDP1-201ENST00000335725 SH3BP1Q9Y3L3 701 aa10.65□□□□□ -0.71
TDP1-201ENST00000335725 TONSLQ96HA7 1378 aa10.64□□□□□ -0.71
TDP1-201ENST00000335725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.64□□□□□ -0.71
TDP1-201ENST00000335725 MNS1Q8NEH6 495 aa10.64□□□□□ -0.71
TDP1-201ENST00000335725 KIF1CO43896 1103 aaKnown RBP10.64□□□□□ -0.71
TDP1-201ENST00000335725 NCOA2Q15596 1464 aa10.64□□□□□ -0.71
TDP1-201ENST00000335725 NBPF9Q3BBW0 867 aa10.63□□□□□ -0.71
TDP1-201ENST00000335725 GBP4Q96PP9 640 aa10.63□□□□□ -0.71
TDP1-201ENST00000335725 GPATCH11Q8N954 259 aa10.63□□□□□ -0.71
TDP1-201ENST00000335725 SLFN14P0C7P3 912 aa10.62□□□□□ -0.71
TDP1-201ENST00000335725 PANK3Q9H999 370 aa10.62□□□□□ -0.71
TDP1-201ENST00000335725 IBTKQ9P2D0 1353 aaPredicted RBP10.62□□□□□ -0.71
TDP1-201ENST00000335725 ICE2Q659A1 982 aa10.62□□□□□ -0.71
TDP1-201ENST00000335725 GAS2L3Q86XJ1 694 aa10.62□□□□□ -0.71
TDP1-201ENST00000335725 GOLGA6L6A8MZA4 724 aa10.62□□□□□ -0.71
TDP1-201ENST00000335725 KIAA2012Q0VF49 1180 aa10.62□□□□□ -0.71
TDP1-201ENST00000335725 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
TDP1-201ENST00000335725 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
TDP1-201ENST00000335725 CT47A1Q5JQC4 288 aaPredicted RBP10.61□□□□□ -0.71
TDP1-201ENST00000335725 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
TDP1-201ENST00000335725 CCNB3Q8WWL7 1395 aa10.61□□□□□ -0.71
TDP1-201ENST00000335725 SCAPERQ9BY12 1400 aa10.61□□□□□ -0.71
TDP1-201ENST00000335725 SEMA3FQ13275 785 aa10.61□□□□□ -0.71
TDP1-201ENST00000335725 PDE3BQ13370 1112 aa10.61□□□□□ -0.71
TDP1-201ENST00000335725 RASSF4Q9H2L5 321 aa10.61□□□□□ -0.71
TDP1-201ENST00000335725 SETD5Q9C0A6 1442 aa10.61□□□□□ -0.71
TDP1-201ENST00000335725 ERICH3Q5RHP9 1530 aa10.61□□□□□ -0.71
TDP1-201ENST00000335725 HSP90AB1P08238 724 aaKnown RBP10.6□□□□□ -0.71
TDP1-201ENST00000335725 EP400NLQ6ZTU2 488 aa10.6□□□□□ -0.71
TDP1-201ENST00000335725 DONSONQ9NYP3 566 aa10.6□□□□□ -0.71
TDP1-201ENST00000335725 RSPH14Q9UHP6 348 aa10.6□□□□□ -0.71
TDP1-201ENST00000335725 KDM2BQ8NHM5 1336 aa10.6□□□□□ -0.71
TDP1-201ENST00000335725 ANAPC15P60006 121 aa10.6□□□□□ -0.71
TDP1-201ENST00000335725 TERF2Q15554 542 aa10.6□□□□□ -0.71
TDP1-201ENST00000335725 KIF16BQ96L93 1317 aa10.6□□□□□ -0.71
TDP1-201ENST00000335725 NOP2P46087 812 aaKnown RBP10.59□□□□□ -0.71
TDP1-201ENST00000335725 TDO2P48775 406 aa10.59□□□□□ -0.71
TDP1-201ENST00000335725 TERF2IPQ9NYB0 399 aa10.59□□□□□ -0.71
TDP1-201ENST00000335725 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
TDP1-201ENST00000335725 GUCY2CP25092 1073 aa10.59□□□□□ -0.71
TDP1-201ENST00000335725 PDLIM2Q96JY6 352 aa10.59□□□□□ -0.71
TDP1-201ENST00000335725 IRF6O14896 467 aa10.59□□□□□ -0.71
TDP1-201ENST00000335725 DHX16O60231 1041 aaKnown RBP10.59□□□□□ -0.71
TDP1-201ENST00000335725 DIAPH3Q9NSV4 1193 aa10.58□□□□□ -0.72
TDP1-201ENST00000335725 BSDC1Q9NW68 430 aaPredicted RBP10.58□□□□□ -0.72
TDP1-201ENST00000335725 GOLGA6L22H0YM25 854 aa10.58□□□□□ -0.72
TDP1-201ENST00000335725 U2AF2P26368 475 aaKnown RBP eCLIP10.58□□□□□ -0.72
TDP1-201ENST00000335725 GOLGA6L1Q8N7Z2 621 aa10.58□□□□□ -0.72
TDP1-201ENST00000335725 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.58□□□□□ -0.72
TDP1-201ENST00000335725 ZNF853P0CG23 659 aa10.58□□□□□ -0.72
TDP1-201ENST00000335725 CHAF1AQ13111 956 aaPredicted RBP10.58□□□□□ -0.72
TDP1-201ENST00000335725 BCL2L12Q9HB09 334 aa10.57□□□□□ -0.72
TDP1-201ENST00000335725 TBC1D2Q9BYX2 928 aa10.57□□□□□ -0.72
TDP1-201ENST00000335725 CCDC88BA6NC98 1476 aa10.57□□□□□ -0.72
TDP1-201ENST00000335725 NBPF10Q6P3W6 841 aaKnown RBP10.57□□□□□ -0.72
TDP1-201ENST00000335725 RNF217Q8TC41 542 aa10.57□□□□□ -0.72
TDP1-201ENST00000335725 NBPF6Q5VWK0 638 aa10.56□□□□□ -0.72
TDP1-201ENST00000335725 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
TDP1-201ENST00000335725 ANKRD7Q92527 254 aa10.56□□□□□ -0.72
TDP1-201ENST00000335725 NBPF4Q96M43 638 aa10.56□□□□□ -0.72
TDP1-201ENST00000335725 USP19O94966 1318 aa10.56□□□□□ -0.72
TDP1-201ENST00000335725 CASC1Q6TDU7 716 aa10.56□□□□□ -0.72
TDP1-201ENST00000335725 ZKSCAN8Q15776 578 aaPredicted RBP10.56□□□□□ -0.72
TDP1-201ENST00000335725 MED4Q9NPJ6 270 aa10.55□□□□□ -0.72
TDP1-201ENST00000335725 MLECQ14165 292 aa10.55□□□□□ -0.72
TDP1-201ENST00000335725 CRBNQ96SW2 442 aa10.55□□□□□ -0.72
TDP1-201ENST00000335725 RAD50Q92878 1312 aa10.54□□□□□ -0.72
TDP1-201ENST00000335725 EIF4G2P78344 907 aaKnown RBP eCLIP10.54□□□□□ -0.72
TDP1-201ENST00000335725 CCDC91Q7Z6B0 441 aa10.54□□□□□ -0.72
TDP1-201ENST00000335725 SKAP1Q86WV1 359 aa10.54□□□□□ -0.72
TDP1-201ENST00000335725 OTUD6BQ8N6M0 293 aa10.54□□□□□ -0.72
TDP1-201ENST00000335725 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
TDP1-201ENST00000335725 CCDC144AA2RUR9 1427 aa10.54□□□□□ -0.72
TDP1-201ENST00000335725 KRT222Q8N1A0 295 aa10.54□□□□□ -0.72
TDP1-201ENST00000335725 MAFGO15525 162 aa10.53□□□□□ -0.72
TDP1-201ENST00000335725 KNSTRNQ9Y448 316 aa10.53□□□□□ -0.72
TDP1-201ENST00000335725 SYCP1Q15431 976 aa10.53□□□□□ -0.72
TDP1-201ENST00000335725 MORC2Q9Y6X9 1032 aaPredicted RBP10.53□□□□□ -0.72
TDP1-201ENST00000335725 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
TDP1-201ENST00000335725 ABCC8Q09428 1581 aa10.53□□□□□ -0.72
TDP1-201ENST00000335725 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
TDP1-201ENST00000335725 DEF6Q9H4E7 631 aa10.53□□□□□ -0.72
TDP1-201ENST00000335725 MAPK8IP3Q9UPT6 1336 aa10.52□□□□□ -0.72
TDP1-201ENST00000335725 MYOM3Q5VTT5 1437 aa10.52□□□□□ -0.72
TDP1-201ENST00000335725 ERICH4A6NGS2 130 aa10.52□□□□□ -0.73
TDP1-201ENST00000335725 CASQ1P31415 396 aa10.52□□□□□ -0.73
TDP1-201ENST00000335725 DDX41Q9UJV9 622 aaKnown RBP10.52□□□□□ -0.73
TDP1-201ENST00000335725 CFAP65Q6ZU64 1925 aaKnown RBP10.52□□□□□ -0.73
TDP1-201ENST00000335725 HSPA5P11021 654 aaKnown RBP10.52□□□□□ -0.73
TDP1-201ENST00000335725 ZNF445P59923 1031 aa10.52□□□□□ -0.73
TDP1-201ENST00000335725 PRDM16Q9HAZ2 1276 aa10.52□□□□□ -0.73
TDP1-201ENST00000335725 MRVI1Q9Y6F6 885 aa10.51□□□□□ -0.73
TDP1-201ENST00000335725 KIF3CO14782 793 aa10.51□□□□□ -0.73
TDP1-201ENST00000335725 LRCH2Q5VUJ6 765 aa10.51□□□□□ -0.73
TDP1-201ENST00000335725 MAP3K1Q13233 1512 aa10.51□□□□□ -0.73
TDP1-201ENST00000335725 ARID4AP29374 1257 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms